General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000409720
Gene ID:	ENSG00000187736
Gene Name:	NHEJ1
Sequence (UNICHARACTER ENCODING)	AUGGAAGAACUGGAGCAAGGCCUGUUGAUGCAGCCAUGGGCGUGGCUACAGCUUGCAGAGAACUCCCUCUUGGCCAAGGUUUUUAUCACCAAGCAGGGCUAUGCCUUGUUGGUUUCAGAUCUUCAACAGGUGUGGCAUGAACAGGUGGACACUAGUGUGGUCAGCCAGCGAGCCAAGGAGCUGAACAAGCGGCUCACUGCUCCUCCUGCAGCUUUCCUCUGUCAUUUGGAUAAUCUCCUUCGCCCAUUGUUGAAGGACGCUGCUCACCCUAGCGAAGCUACCUUCUCCUGUGAUUGUGUGGCAGAUGCACUGAUUCUACGGGUGCGAAGUGAGCUCUCUGGCCUCCCCUUCUAUUGGAAUUUCCACUGCAUGCUAGCUAGUCCUUCCCUGGUCUCCCAACAUUUGAUUCGUCCUCUGAUGGGCAUGAGUCUGGCAUUACAGUGCCAAGUGAGGGAGCUAGCAACGUUACUUCAUAUGAAAGACCUAGAGAUCCAAGACUACCAGGAGAGUGGGGCUACGCUGAUUCGAGAUCGAUUGAAGACAGAACCAUUUGAAGAAAAUUCCUUCUUGGAACAAUUUAUGAUAGAGAAACUGCCAGAGGCAUGCAGCAUUGGUGAUGGAAAGCCCUUUGUCAUGAAUCUGCAGGAUCUGUAUAUGGCAGUCACCACACAAGAGGUCCAAGUGGGACAGAAGCAUCAAGGCGCUGGAGAUCCUCAUACCUCAAACAGUGCUUCCCUGCAAGGAAUCGAUAGCCAAUGUGUAAACCAGCCAGAACAACUGGUCUCCUCAGCCCCAACCCUCUCAGCACCUGAGAAAGAGUCCACGGCCCUCUGCAGAGACCUCAGCUGUCAAAGGUCAAGAGGAAGAAGCCAAGGGGUCUCUUCAGUUAAUCUGUUGUGGCCUCAGCUGCUGAGGAUGGЖCUUGGAGAACAGCUUCCAAGCUUCACCUUGAAAGAAGCUUACAUGGCAGCAAUAUUUCUAAAAUAGUGAUACAGUCAGAGGCCUCCUGUAAGGGCGAGAGAЖCUGAAGUUGAUGUUGACAGGCCCACAGGGAAUUGGCCUUCCCUGUUCAAGUGGAAGCCAGUCUCUGAGAAUCCCGUGCUCUCCUCUCUUUUGGUGGAGGUUCUGUAGGUUCAGGUUUCUACCAUGGЖCUPUAGGUAUAUAGGGCAAGUCAGCAAGAAAGCACCACACACUCAGGAAGCCUUGUCUACCUUUCCCUAGCGUCUCUAGCCAGCCAGCCCCAGAUACUCCUCAGAGЖCCCACUUCUCUCUUUUGCAUGGAAUAAAAAGCACUCACAGUCCCUGCUUUUGGGAUUACUUAUGCUGUGGAACUCAUAACCCAAUUCACUUCCUUCACUGGGUCCCACCCCAUUGUUGUCUCUGGAUGAAGUCUAGCCAUCAGUCUGGUCCUUCAGAUUCUUCGUAAACUUUUCUGCAGUUGCCAGAGCUAAGUCUCCAUUUGGAAACUUUGAUCUCAAGAACUCUCUUGAUGGUGGGCACAAGACAGAUAGGUGAUUGCUGCUUUCCUUUGCCAAACUUGGAUGCAUUUUUCUCUUUGUUUCCAAAGUAUAGGCAACAGGUUAAЖCUACCACGUGGGGUAGUUUAUCAAUCCUCCCGCCUCAPCCUUCUGCAUAACUGGGACUAAAGGCACACACCACCACACCUAGCUAAUUUUUGUAUUUUUUUGUGUGUGGAGACAAGGCUUUGCCAUGUUGCCCAGGCUGGUCUUGAACUCCUGGACUCUAGUGAUCUGCCCACCUCAACCUCCCAAAGUGCUGGGAUUACAGGCAUGAGCUACCACGCCUAUCCAAUUUCUGGUUUAUUUACUUUCGAUGGUUAAAUGCCUCCUUAUUCAAAUAUCCUGUAUAUAUACUGGCGUUUCUGUCCUGAUGUCAAGUCUCGAGAGAAGAUGAUCAAACAAUAAUAAAAUAAUUAUAAUAAGAACAACAAUAAUAAA
Sequence (SHORT NAMES ENCODING)	AUGGAAGAACUGGAGCAAGGCCUGUUGAUGCAGCCAUGGGCGUGGCUACAGCUUGCAGAGAACUCCCUCUUGGCCAAGGUUUUUAUCACCAAGCAGGGCUAUGCCUUGUUGGUUUCAGAUCUUCAACAGGUGUGGCAUGAACAGGUGGACACUAGUGUGGUCAGCCAGCGAGCCAAGGAGCUGAACAAGCGGCUCACUGCUCCUCCUGCAGCUUUCCUCUGUCAUUUGGAUAAUCUCCUUCGCCCAUUGUUGAAGGACGCUGCUCACCCUAGCGAAGCUACCUUCUCCUGUGAUUGUGUGGCAGAUGCACUGAUUCUACGGGUGCGAAGUGAGCUCUCUGGCCUCCCCUUCUAUUGGAAUUUCCACUGCAUGCUAGCUAGUCCUUCCCUGGUCUCCCAACAUUUGAUUCGUCCUCUGAUGGGCAUGAGUCUGGCAUUACAGUGCCAAGUGAGGGAGCUAGCAACGUUACUUCAUAUGAAAGACCUAGAGAUCCAAGACUACCAGGAGAGUGGGGCUACGCUGAUUCGAGAUCGAUUGAAGACAGAACCAUUUGAAGAAAAUUCCUUCUUGGAACAAUUUAUGAUAGAGAAACUGCCAGAGGCAUGCAGCAUUGGUGAUGGAAAGCCCUUUGUCAUGAAUCUGCAGGAUCUGUAUAUGGCAGUCACCACACAAGAGGUCCAAGUGGGACAGAAGCAUCAAGGCGCUGGAGAUCCUCAUACCUCAAACAGUGCUUCCCUGCAAGGAAUCGAUAGCCAAUGUGUAAACCAGCCAGAACAACUGGUCUCCUCAGCCCCAACCCUCUCAGCACCUGAGAAAGAGUCCACGGCCCUCUGCAGAGACCUCAGCUGUCAAAGGUCAAGAGGAAGAAGCCAAGGGGUCUCUUCAGUUAAUCUGUUGUGGCCUCAGCUGCUGAGGAUGGm6ACUUGGAGAACAGCUUCCAAGCUUCACCUUGAAAGAAGCUUACAUGGCAGCAAUAUUUCUAAAAUAGUGAUACAGUCAGAGGCCUCCUGUAAGGGCGAGAGAm6ACUGAAGUUGAUGUUGACAGGCCCACAGGGAAUUGGCCUUCCCUGUUCAAGUGGAAGCCAGUCUCUGAGAAUCCCGUGCUCUCCUCUCUUUUGGUGGAGGUUCUGUAGGUUCAGGUUUCUACCAUGGm6ACUYUAGGUAUAUAGGGCAAGUCAGCAAGAAAGCACCACACACUCAGGAAGCCUUGUCUACCUUUCCCUAGCGUCUCUAGCCAGCCAGCCCCAGAUACUCCUCAGAGm6ACCCACUUCUCUCUUUUGCAUGGAAUAAAAAGCACUCACAGUCCCUGCUUUUGGGAUUACUUAUGCUGUGGAACUCAUAACCCAAUUCACUUCCUUCACUGGGUCCCACCCCAUUGUUGUCUCUGGAUGAAGUCUAGCCAUCAGUCUGGUCCUUCAGAUUCUUCGUAAACUUUUCUGCAGUUGCCAGAGCUAAGUCUCCAUUUGGAAACUUUGAUCUCAAGAACUCUCUUGAUGGUGGGCACAAGACAGAUAGGUGAUUGCUGCUUUCCUUUGCCAAACUUGGAUGCAUUUUUCUCUUUGUUUCCAAAGUAUAGGCAACAGGUUAAm6ACUACCACGUGGGGUAGUUUAUCAAUCCUCCCGCCUCAYCCUUCUGCAUAACUGGGACUAAAGGCACACACCACCACACCUAGCUAAUUUUUGUAUUUUUUUGUGUGUGGAGACAAGGCUUUGCCAUGUUGCCCAGGCUGGUCUUGAACUCCUGGACUCUAGUGAUCUGCCCACCUCAACCUCCCAAAGUGCUGGGAUUACAGGCAUGAGCUACCACGCCUAUCCAAUUUCUGGUUUAUUUACUUUCGAUGGUUAAAUGCCUCCUUAUUCAAAUAUCCUGUAUAUAUACUGGCGUUUCUGUCCUGAUGUCAAGUCUCGAGAGAAGAUGAUCAAACAAUAAUAAAAUAAUUAUAAUAAGAACAACAAUAAUAAA
Sequence (MODOMICS CODE ENCODING)	AUGGAAGAACUGGAGCAAGGCCUGUUGAUGCAGCCAUGGGCGUGGCUACAGCUUGCAGAGAACUCCCUCUUGGCCAAGGUUUUUAUCACCAAGCAGGGCUAUGCCUUGUUGGUUUCAGAUCUUCAACAGGUGUGGCAUGAACAGGUGGACACUAGUGUGGUCAGCCAGCGAGCCAAGGAGCUGAACAAGCGGCUCACUGCUCCUCCUGCAGCUUUCCUCUGUCAUUUGGAUAAUCUCCUUCGCCCAUUGUUGAAGGACGCUGCUCACCCUAGCGAAGCUACCUUCUCCUGUGAUUGUGUGGCAGAUGCACUGAUUCUACGGGUGCGAAGUGAGCUCUCUGGCCUCCCCUUCUAUUGGAAUUUCCACUGCAUGCUAGCUAGUCCUUCCCUGGUCUCCCAACAUUUGAUUCGUCCUCUGAUGGGCAUGAGUCUGGCAUUACAGUGCCAAGUGAGGGAGCUAGCAACGUUACUUCAUAUGAAAGACCUAGAGAUCCAAGACUACCAGGAGAGUGGGGCUACGCUGAUUCGAGAUCGAUUGAAGACAGAACCAUUUGAAGAAAAUUCCUUCUUGGAACAAUUUAUGAUAGAGAAACUGCCAGAGGCAUGCAGCAUUGGUGAUGGAAAGCCCUUUGUCAUGAAUCUGCAGGAUCUGUAUAUGGCAGUCACCACACAAGAGGUCCAAGUGGGACAGAAGCAUCAAGGCGCUGGAGAUCCUCAUACCUCAAACAGUGCUUCCCUGCAAGGAAUCGAUAGCCAAUGUGUAAACCAGCCAGAACAACUGGUCUCCUCAGCCCCAACCCUCUCAGCACCUGAGAAAGAGUCCACGGCCCUCUGCAGAGACCUCAGCUGUCAAAGGUCAAGAGGAAGAAGCCAAGGGGUCUCUUCAGUUAAUCUGUUGUGGCCUCAGCUGCUGAGGAUGG2000000006ACUUGGAGAACAGCUUCCAAGCUUCACCUUGAAAGAAGCUUACAUGGCAGCAAUAUUUCUAAAAUAGUGAUACAGUCAGAGGCCUCCUGUAAGGGCGAGAGA2000000006ACUGAAGUUGAUGUUGACAGGCCCACAGGGAAUUGGCCUUCCCUGUUCAAGUGGAAGCCAGUCUCUGAGAAUCCCGUGCUCUCCUCUCUUUUGGUGGAGGUUCUGUAGGUUCAGGUUUCUACCAUGG2000000006ACU2000000009UUAGGUAUAUAGGGCAAGUCAGCAAGAAAGCACCACACACUCAGGAAGCCUUGUCUACCUUUCCCUAGCGUCUCUAGCCAGCCAGCCCCAGAUACUCCUCAGAG2000000006ACCCACUUCUCUCUUUUGCAUGGAAUAAAAAGCACUCACAGUCCCUGCUUUUGGGAUUACUUAUGCUGUGGAACUCAUAACCCAAUUCACUUCCUUCACUGGGUCCCACCCCAUUGUUGUCUCUGGAUGAAGUCUAGCCAUCAGUCUGGUCCUUCAGAUUCUUCGUAAACUUUUCUGCAGUUGCCAGAGCUAAGUCUCCAUUUGGAAACUUUGAUCUCAAGAACUCUCUUGAUGGUGGGCACAAGACAGAUAGGUGAUUGCUGCUUUCCUUUGCCAAACUUGGAUGCAUUUUUCUCUUUGUUUCCAAAGUAUAGGCAACAGGUUAA2000000006ACUACCACGUGGGGUAGUUUAUCAAUCCUCCCGCCUCA2000000009UCCUUCUGCAUAACUGGGACUAAAGGCACACACCACCACACCUAGCUAAUUUUUGUAUUUUUUUGUGUGUGGAGACAAGGCUUUGCCAUGUUGCCCAGGCUGGUCUUGAACUCCUGGACUCUAGUGAUCUGCCCACCUCAACCUCCCAAAGUGCUGGGAUUACAGGCAUGAGCUACCACGCCUAUCCAAUUUCUGGUUUAUUUACUUUCGAUGGUUAAAUGCCUCCUUAUUCAAAUAUCCUGUAUAUAUACUGGCGUUUCUGUCCUGAUGUCAAGUCUCGAGAGAAGAUGAUCAAACAAUAAUAAAAUAAUUAUAAUAAGAACAACAAUAAUAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	920	1022	1149	1152	1256	1582	1620
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	Y
Genomic Coordinates	2:219076351:-	2:219076249:-	2:219076122:-	2:219076119:-	2:219076015:-	2:219075689:-	2:219075651:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8