General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000295704
Gene ID:	ENSG00000163481
Gene Name:	RNF25
Sequence (UNICHARACTER ENCODING)	AUUUCCGGUUCCGGCUGCGGGCCGGUGAAGAUAUGGCGGCGUCUGCGUCUGCAGCUGCAGGGGAGGAGGACUGGGUCCUUCCCUCUGAAGUUGAAGUAUUGGAGUCCAUCUAUCUAGAUGAACUACAGGUGAUUAAAGGAAAUGGCAGAACUUCACCAUGGGAGAUCUACAUCACUUUGCAPCCUGCCACUGCAGAGGACCAGGAUUCACAGUAUGUCUGCUUCACUCUGGUGCUUCAGGUCCCAGCAGAGUAUCCCCAUGAGGUGCCACAGAUCUCUAUCCGAAAUCCCCGAGGACUUUCAGAUGAACAGAUCCACACGAUCUUACAGGUGCUGGGCCACGUGGCCAAGGCUGGGCUGGGCACUGCCAUGCUGUAUGAACUCAUUGAGAAAGGGAAGGAAAUUCUCACAGAUAЖCAACAPCCCUCAUGGCCAGUGUGUCAUCUGCCUCUAUGGUUUCCAGGAGAAGGAGGCCUPUACCAAAACACCCUGUUACCACUACUUCCACUGCCACUGCCUUGCUCGGUACAPCCAGCACAUGGAGCAAGAGCUGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCAUGCUACAACCAAACAGAAGGCAGUCGGUGUGCAGUGUCCAGUGUGCAGAGAGCCCCUCGUGUAUGAUCUUGCCUCACUGAAAGCAGCCCCUGAACCCCAACAGCCCAUGGAGCUGUACCAGCCCAGUGCAGAGAGCUUGCGCCAGCAAGAAGAACGCAAGCGGCUCUACCAGAGGCAGCAGGAGCGGGGGGGAAUCAUUGACCUUGAGGCUGAGCGAAACCGAUACUUCAUCAGCCUUCAGCAGCCUCCUGCCCCUGCGGAACCUGAGUCAGCUGUAGAUGUCUCCAAAGGAUCCCAACCACCCAGCACCCUUGCAGCAGAACUAUCCACCUCACCAGCCGUCCAAUCCACUUUGCCACCPCCUCUGCCUGUGGCGACCCAGCACAUAUGUGAGAAGAUUCCAGGGACCAGGUCAAAUCAGCAAAGGUUGGGCGAAACCCAGAAAGCUAUGCUAGAUCCCCCCAAGCCCAGUCGAGGUCCCUGGCGACAGCCCGAACGGAGGCACCCAAAGGGAGGGGAGUGCCACGCCCCUAAAGGUACCCGUGACACCCAGGAЖCUGCCACCPCCUGAGGGGCCCCUCAAGGAGCCCAUGGЖCCUAAAGCCAGAACCCCAUAGCCAAGGAGUUGAAGGUCCUCCACAAGAGAAGGGGCCUGGCAGCUGGCAGGGGCCCCCACCCCGCAGGЖCUCGGGЖCUGUGUUCGCUGGGAGCGCUCUAAAGGCCGGACACCCGGUUCUUCCUACCCUCGCCUGCCUCGGGGCCAGGGAGCAUACCGGCCUGGUACUCGGAGGGAGUCCCUGGGCCUGGAAUCUAAGGAUGGUUCCUAGCAGGЖCUUGGUGGGGGGAACAGGGAAUUGGGGAUGGGAGGGAGGCAAUAAAGAUAUUUGGCCUUC
Sequence (SHORT NAMES ENCODING)	AUUUCCGGUUCCGGCUGCGGGCCGGUGAAGAUAUGGCGGCGUCUGCGUCUGCAGCUGCAGGGGAGGAGGACUGGGUCCUUCCCUCUGAAGUUGAAGUAUUGGAGUCCAUCUAUCUAGAUGAACUACAGGUGAUUAAAGGAAAUGGCAGAACUUCACCAUGGGAGAUCUACAUCACUUUGCAYCCUGCCACUGCAGAGGACCAGGAUUCACAGUAUGUCUGCUUCACUCUGGUGCUUCAGGUCCCAGCAGAGUAUCCCCAUGAGGUGCCACAGAUCUCUAUCCGAAAUCCCCGAGGACUUUCAGAUGAACAGAUCCACACGAUCUUACAGGUGCUGGGCCACGUGGCCAAGGCUGGGCUGGGCACUGCCAUGCUGUAUGAACUCAUUGAGAAAGGGAAGGAAAUUCUCACAGAUAm6ACAACAYCCCUCAUGGCCAGUGUGUCAUCUGCCUCUAUGGUUUCCAGGAGAAGGAGGCCUYUACCAAAACACCCUGUUACCACUACUUCCACUGCCACUGCCUUGCUCGGUACAYCCAGCACAUGGAGCAAGAGCUGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCAUGCUACAACCAAACAGAAGGCAGUCGGUGUGCAGUGUCCAGUGUGCAGAGAGCCCCUCGUGUAUGAUCUUGCCUCACUGAAAGCAGCCCCUGAACCCCAACAGCCCAUGGAGCUGUACCAGCCCAGUGCAGAGAGCUUGCGCCAGCAAGAAGAACGCAAGCGGCUCUACCAGAGGCAGCAGGAGCGGGGGGGAAUCAUUGACCUUGAGGCUGAGCGAAACCGAUACUUCAUCAGCCUUCAGCAGCCUCCUGCCCCUGCGGAACCUGAGUCAGCUGUAGAUGUCUCCAAAGGAUCCCAACCACCCAGCACCCUUGCAGCAGAACUAUCCACCUCACCAGCCGUCCAAUCCACUUUGCCACCYCCUCUGCCUGUGGCGACCCAGCACAUAUGUGAGAAGAUUCCAGGGACCAGGUCAAAUCAGCAAAGGUUGGGCGAAACCCAGAAAGCUAUGCUAGAUCCCCCCAAGCCCAGUCGAGGUCCCUGGCGACAGCCCGAACGGAGGCACCCAAAGGGAGGGGAGUGCCACGCCCCUAAAGGUACCCGUGACACCCAGGAm6ACUGCCACCYCCUGAGGGGCCCCUCAAGGAGCCCAUGGm6ACCUAAAGCCAGAACCCCAUAGCCAAGGAGUUGAAGGUCCUCCACAAGAGAAGGGGCCUGGCAGCUGGCAGGGGCCCCCACCCCGCAGGm6ACUCGGGm6ACUGUGUUCGCUGGGAGCGCUCUAAAGGCCGGACACCCGGUUCUUCCUACCCUCGCCUGCCUCGGGGCCAGGGAGCAUACCGGCCUGGUACUCGGAGGGAGUCCCUGGGCCUGGAAUCUAAGGAUGGUUCCUAGCAGGm6ACUUGGUGGGGGGAACAGGGAAUUGGGGAUGGGAGGGAGGCAAUAAAGAUAUUUGGCCUUC
Sequence (MODOMICS CODE ENCODING)	AUUUCCGGUUCCGGCUGCGGGCCGGUGAAGAUAUGGCGGCGUCUGCGUCUGCAGCUGCAGGGGAGGAGGACUGGGUCCUUCCCUCUGAAGUUGAAGUAUUGGAGUCCAUCUAUCUAGAUGAACUACAGGUGAUUAAAGGAAAUGGCAGAACUUCACCAUGGGAGAUCUACAUCACUUUGCA2000000009UCCUGCCACUGCAGAGGACCAGGAUUCACAGUAUGUCUGCUUCACUCUGGUGCUUCAGGUCCCAGCAGAGUAUCCCCAUGAGGUGCCACAGAUCUCUAUCCGAAAUCCCCGAGGACUUUCAGAUGAACAGAUCCACACGAUCUUACAGGUGCUGGGCCACGUGGCCAAGGCUGGGCUGGGCACUGCCAUGCUGUAUGAACUCAUUGAGAAAGGGAAGGAAAUUCUCACAGAUA2000000006ACAACA2000000009UCCCUCAUGGCCAGUGUGUCAUCUGCCUCUAUGGUUUCCAGGAGAAGGAGGCCU2000000009UUACCAAAACACCCUGUUACCACUACUUCCACUGCCACUGCCUUGCUCGGUACA2000000009UCCAGCACAUGGAGCAAGAGCUGAAGGCACAAGGACAGGAGCAGGAACAGGAACGGCAGCAUGCUACAACCAAACAGAAGGCAGUCGGUGUGCAGUGUCCAGUGUGCAGAGAGCCCCUCGUGUAUGAUCUUGCCUCACUGAAAGCAGCCCCUGAACCCCAACAGCCCAUGGAGCUGUACCAGCCCAGUGCAGAGAGCUUGCGCCAGCAAGAAGAACGCAAGCGGCUCUACCAGAGGCAGCAGGAGCGGGGGGGAAUCAUUGACCUUGAGGCUGAGCGAAACCGAUACUUCAUCAGCCUUCAGCAGCCUCCUGCCCCUGCGGAACCUGAGUCAGCUGUAGAUGUCUCCAAAGGAUCCCAACCACCCAGCACCCUUGCAGCAGAACUAUCCACCUCACCAGCCGUCCAAUCCACUUUGCCACC2000000009UCCUCUGCCUGUGGCGACCCAGCACAUAUGUGAGAAGAUUCCAGGGACCAGGUCAAAUCAGCAAAGGUUGGGCGAAACCCAGAAAGCUAUGCUAGAUCCCCCCAAGCCCAGUCGAGGUCCCUGGCGACAGCCCGAACGGAGGCACCCAAAGGGAGGGGAGUGCCACGCCCCUAAAGGUACCCGUGACACCCAGGA2000000006ACUGCCACC2000000009UCCUGAGGGGCCCCUCAAGGAGCCCAUGG2000000006ACCUAAAGCCAGAACCCCAUAGCCAAGGAGUUGAAGGUCCUCCACAAGAGAAGGGGCCUGGCAGCUGGCAGGGGCCCCCACCCCGCAGG2000000006ACUCGGG2000000006ACUGUGUUCGCUGGGAGCGCUCUAAAGGCCGGACACCCGGUUCUUCCUACCCUCGCCUGCCUCGGGGCCAGGGAGCAUACCGGCCUGGUACUCGGAGGGAGUCCCUGGGCCUGGAAUCUAAGGAUGGUUCCUAGCAGG2000000006ACUUGGUGGGGGGAACAGGGAAUUGGGGAUGGGAGGGAGGCAAUAAAGAUAUUUGGCCUUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	182	415	421	475	529	950	1145	1154	1183	1272	1279	1417
Modification Positions	Y	m6A	Y	Y	Y	Y	m6A	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	2:218668308:-	2:218666205:-	2:218666199:-	2:218666046:-	2:218665992:-	2:218664419:-	2:218664224:-	2:218664215:-	2:218664186:-	2:218664097:-	2:218664090:-	2:218663952:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8