General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000457889
Gene ID:	ENSG00000163171
Gene Name:	CDC42EP3
Sequence (UNICHARACTER ENCODING)	CGCGCCCACCGGAGCCCGGGCUGAGAGGGACCUGGGGAGCUGCGGCCUGGCCGGGGCGGCGCACUCAGGUGGCCUCGCUUCCCUGCGGGUCACCGCCCGCCACUCGCACAGCUAGGUUUGUCCUGGUUGUGGUCAAGACUGGAUGAUGUAACUGGCUCUCUAGGAAGCCUCACUUGGCCGUAACCUCAGGAAGGUUCUCUUUGACCCCAUCUCAUUUCGAAGCCACUUCUGAAGCCACUUGAGAAAAAUGAUGUGЖCAGUUCCUAUCAAAAAGGAUUCAGAAACAUAUACCAUCUGUGAAGAAAGUGGCCCUUUCUCCCGCUUGCAAAAUAGЖCAUUCUCAAAUUCCAAAAUGCCAGCCAAGACCCCAAUUUACCUGAAAGCAGCCAAUAACAAGAAAGGAAAGAAAUUUAAЖCUGAGGGЖCAUUCUGUCUCCUGAUAUGAUCAGUCCCCCGCUUGGAGЖCUUUCGCCACACCAUCCACAUUGGCAAAGAGGGCCAGCACGAUGUCUUUGGAGAUAUUUCCUUUCUUCAAGGGAЖCUACGAGCUUUUACCUGGAAACCAGGAGAAAGCACACCUGGGCCAGUUCCCUGGGCAUAAUGAGUUCUUCCGGGCCAACAGCACCUCGGЖCUCUGUGUUCACAGAAACGCCCUCCCCGGUGCUCAAAAAUGCCAUCUCCCUCCCGACCAUUGGAGGAUCCCAAGCUCUCAUGUUGCCCUUAUUGUCACCAGUGЖCAUUUAAUUCCAAACAGGAGUCCUUCGGGCCAGCAAAGCUGCCCAGGCUUAGCUGCGAGCCCGUCAUGGAGGAAAAAGCUCAGGAGAAAAGCAGUCUGUUGGAGAAUGGGЖCAGUCCACCAGGGAGACACCUCGUGGGGCUCCAGCGGUUCUGCAUCUCAGUCCAGCCAAGGCAGAGACAGCCACUCCUCCAGCCUGUCCGAЖCAGUACCCCGACUGGCCAGCCGAGGЖCAUGUUUGACCAPCCCACCCCAUGCGAGCUCAUCAAGGG
Sequence (SHORT NAMES ENCODING)	CGCGCCCACCGGAGCCCGGGCUGAGAGGGACCUGGGGAGCUGCGGCCUGGCCGGGGCGGCGCACUCAGGUGGCCUCGCUUCCCUGCGGGUCACCGCCCGCCACUCGCACAGCUAGGUUUGUCCUGGUUGUGGUCAAGACUGGAUGAUGUAACUGGCUCUCUAGGAAGCCUCACUUGGCCGUAACCUCAGGAAGGUUCUCUUUGACCCCAUCUCAUUUCGAAGCCACUUCUGAAGCCACUUGAGAAAAAUGAUGUGm6ACAGUUCCUAUCAAAAAGGAUUCAGAAACAUAUACCAUCUGUGAAGAAAGUGGCCCUUUCUCCCGCUUGCAAAAUAGm6ACAUUCUCAAAUUCCAAAAUGCCAGCCAAGACCCCAAUUUACCUGAAAGCAGCCAAUAACAAGAAAGGAAAGAAAUUUAAm6ACUGAGGGm6ACAUUCUGUCUCCUGAUAUGAUCAGUCCCCCGCUUGGAGm6ACUUUCGCCACACCAUCCACAUUGGCAAAGAGGGCCAGCACGAUGUCUUUGGAGAUAUUUCCUUUCUUCAAGGGAm6ACUACGAGCUUUUACCUGGAAACCAGGAGAAAGCACACCUGGGCCAGUUCCCUGGGCAUAAUGAGUUCUUCCGGGCCAACAGCACCUCGGm6ACUCUGUGUUCACAGAAACGCCCUCCCCGGUGCUCAAAAAUGCCAUCUCCCUCCCGACCAUUGGAGGAUCCCAAGCUCUCAUGUUGCCCUUAUUGUCACCAGUGm6ACAUUUAAUUCCAAACAGGAGUCCUUCGGGCCAGCAAAGCUGCCCAGGCUUAGCUGCGAGCCCGUCAUGGAGGAAAAAGCUCAGGAGAAAAGCAGUCUGUUGGAGAAUGGGm6ACAGUCCACCAGGGAGACACCUCGUGGGGCUCCAGCGGUUCUGCAUCUCAGUCCAGCCAAGGCAGAGACAGCCACUCCUCCAGCCUGUCCGAm6ACAGUACCCCGACUGGCCAGCCGAGGm6ACAUGUUUGACCAYCCCACCCCAUGCGAGCUCAUCAAGGG
Sequence (MODOMICS CODE ENCODING)	CGCGCCCACCGGAGCCCGGGCUGAGAGGGACCUGGGGAGCUGCGGCCUGGCCGGGGCGGCGCACUCAGGUGGCCUCGCUUCCCUGCGGGUCACCGCCCGCCACUCGCACAGCUAGGUUUGUCCUGGUUGUGGUCAAGACUGGAUGAUGUAACUGGCUCUCUAGGAAGCCUCACUUGGCCGUAACCUCAGGAAGGUUCUCUUUGACCCCAUCUCAUUUCGAAGCCACUUCUGAAGCCACUUGAGAAAAAUGAUGUG2000000006ACAGUUCCUAUCAAAAAGGAUUCAGAAACAUAUACCAUCUGUGAAGAAAGUGGCCCUUUCUCCCGCUUGCAAAAUAG2000000006ACAUUCUCAAAUUCCAAAAUGCCAGCCAAGACCCCAAUUUACCUGAAAGCAGCCAAUAACAAGAAAGGAAAGAAAUUUAA2000000006ACUGAGGG2000000006ACAUUCUGUCUCCUGAUAUGAUCAGUCCCCCGCUUGGAG2000000006ACUUUCGCCACACCAUCCACAUUGGCAAAGAGGGCCAGCACGAUGUCUUUGGAGAUAUUUCCUUUCUUCAAGGGA2000000006ACUACGAGCUUUUACCUGGAAACCAGGAGAAAGCACACCUGGGCCAGUUCCCUGGGCAUAAUGAGUUCUUCCGGGCCAACAGCACCUCGG2000000006ACUCUGUGUUCACAGAAACGCCCUCCCCGGUGCUCAAAAAUGCCAUCUCCCUCCCGACCAUUGGAGGAUCCCAAGCUCUCAUGUUGCCCUUAUUGUCACCAGUG2000000006ACAUUUAAUUCCAAACAGGAGUCCUUCGGGCCAGCAAAGCUGCCCAGGCUUAGCUGCGAGCCCGUCAUGGAGGAAAAAGCUCAGGAGAAAAGCAGUCUGUUGGAGAAUGGG2000000006ACAGUCCACCAGGGAGACACCUCGUGGGGCUCCAGCGGUUCUGCAUCUCAGUCCAGCCAAGGCAGAGACAGCCACUCCUCCAGCCUGUCCGA2000000006ACAGUACCCCGACUGGCCAGCCGAGG2000000006ACAUGUUUGACCA2000000009UCCCACCCCAUGCGAGCUCAUCAAGGG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	256	333	413	421	460	535	625	729	840	932	958	971
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	2:37646682:-	2:37646605:-	2:37646525:-	2:37646517:-	2:37646478:-	2:37646403:-	2:37646313:-	2:37646209:-	2:37646098:-	2:37646006:-	2:37645980:-	2:37645967:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H VyCX26p5UBRL aJksAshEgQ8U D6ncpa2PPWj3 KTLz8piFYdwC Lny8GcCeVGc9 UKen6WEino9G bXBqJigD9oV3 Yfn77uLS5tv8	5FhTyQVy2tKW 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek KRfQJWH4K5KH msuJfBpJvM5H QmcpiJ88DBDn V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3	Ap2q43bQLNek msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 bXBqJigD9oV3	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx Ap2q43bQLNek gBgcfFQ5WN9C KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U WiQcrNTGZHPT BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3	3TeAZFYFxgvp 6AyXsheySjfx aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3 Yfn77uLS5tv8	6AyXsheySjfx msuJfBpJvM5H nGifePrmgHfe QpiKdbVikVz2 VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3 Yfn77uLS5tv8	5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe V5PvfiKsgFMd VyCX26p5UBRL aJksAshEgQ8U D6ncpa2PPWj3 WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G bXBqJigD9oV3	5Nnepx5V7yHo 6AyXsheySjfx aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3 Yfn77uLS5tv8	6AyXsheySjfx msuJfBpJvM5H VyCX26p5UBRL aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se WiQcrNTGZHPT Lny8GcCeVGc9 bXBqJigD9oV3 Yfn77uLS5tv8	6AyXsheySjfx Ap2q43bQLNek msuJfBpJvM5H nGifePrmgHfe QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn bXBqJigD9oV3 Yfn77uLS5tv8	6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 Lny8GcCeVGc9 bXBqJigD9oV3 Yfn77uLS5tv8	bXBqJigD9oV3 Yfn77uLS5tv8