Modomics - A Database of RNA Modifications

General Data

RNA Type mRNA
Original Source Sci-ModoM
Transcript ID: ENST00000409226
Gene ID: ENSG00000082153
Gene Name: BZW1
Sequence (UNICHARACTER ENCODING) CGGGUGGGGAGGUGGGGUCCGGGUGUGCGCCGCGGCGCUGGCUGCGAAGGCAGUGGCCGAGGCGGGCUCCCUCUGGGCCGUGCCCGGCCUGGCUAACAAAGCCGCCGCGGCCUCUGUUGUGUGAUGGUGUCUUUUAUGAAUAAUCAAAAGCAGCAAAAGCCAACGCUAUCAGGCCAGCGUUUUAAAACUAGAAAAAGAGAUGAAAAAGAGAGGUUUGACCCUACUCAGUUUCAAGACUGUAUUAUUCAAGGCUUAACUGAAACCGGUACUGAUUUGGAAGCAGUAGCUAAGUUUCUUGAUGCUUCUGGAGCAAAACUUGAUUACCGUCGAUAUGCAGAAACACUCUUUGACAUUCUGGUGGCUGGUGGAAUGCUGGCCCCAGGUGGUACACUGGCAGAUGACAUGAUGCGUACAGAUGUCUGCGUGUUUGCAGCCCAAGAAGAUCUAGAGACCAUGCAAGCAUUUGCUCAGGUUUUUAЖCAAGUUAAUCAGGCGCUACЖAAUACCUGGAGAAAGGUUUUGAAGAUGAAGUAAAAAAGCUGCUGCUGUUCUUGAAGGGUUUUUCAGAGUCGGAGAGGAACAAGCUAGCUAUGUUGACUGGUGUUCUUCUGGCUAAUGGAACACUUAAUGCAPCCAUUCUUAAUAGCCUPUAUAAUGAAAAUUUGGUUAAAGAAGGAGUUUCAGCAGCUUUUGCUGUGAAGCUCUPUAAAUCAUGGAUAAAUGAAAAAGAUAUCAAUGCAGUAGCUGCAAGUCUUCGGAAAGUCAGCAUGGAUAACAGACUGAUGGAACUCUUUCCUGCCAAUAAGCAAAGUGUUGAACACUUCACAAAAUAUUUUACUGAGGCAGGCUUGAAAGAGCUUUCAGAAUAUGUUCGGAAUCAGCAAACCAUCGGAGCUCGUAAGGAGCUCCAGAAAGAACUUCAAGAACAGAUGUCCCGUGGUGAUCCAUUUAAGGAUAUAAUUUUAUAUGUCAAGGAGGAGAUGAAAAAAAACAACAUCCCAGAGCCAGUUGUCAUCGGAAUAGUCUGGUCAAGUGUAAUGAGCACUGUGGAAUGGAACAAAAAAGAGGAGCUUGUAGCAGAGCAAGCCAUCAAGCACUUGAAGCAAUACAGCCCUCUACUUGCUGCCUPUACUACUCAAGGUCAGUCUGAGCUGACUCUGUUACUGAAGAUUCAGGAGUAUUGCUAUGACAACAUUCAUUUCAUGAAAGCCUUCCAGAAAAUAGUGGUGCUUUUUUAUAAAGCUGAAGUCCUGAGCGAGGAGCCCAUUUUGAAGUGGUAUAAAGAUGCACAUGUUGCAAAGGGGAAGAGUGUUUUCCUUGAGCAAAUGAAAAAGUUUGUAGAAUGGCUCAAAAAUGCUGAAGAAGAAUCUGAAUCUGAAGCUGAAGAAGGUGACUGAAUUUUGAAACUACACCCUCAGUAAAGCAAACAGGAGUUGUAGAUAAAAUGUCAUGUCUCAUGUGUCCUGGUUCUUACЖUCUUCCUACCPCCCUGUAUCAAGCAUGAUAUAAGGGCUUUCAUGGCAAAUUUUAUUUUAACUGUUUCUAUGGUUGCUGGAAAUGUUGGGUUUAGUUUCUAAAACCAUGUUUUAAGUAGCUACAGGAGCUAUAGAUUUGAAUCUAAUGUUGCAUUAGUCUUUUCAGUUAUCUUCUACCUCCUGUAUUUUCUACUGUAAUAAUGUAAUUUAAGGCCUUCCACAAUGAACAGUUCACUPUAUUCCCUGGGUUUUCUAUAAЖCAGUUUUAAGGAUAUGAUUUGGUUAAAAAAUAAUUUGUUAUAAAAAUUCUGUUUGCAAAUUAAACUGGAAAAGUAUCCAGAGUCUCAAAAGGCAAUGAUUUGUGAGAUAAUAUGGCAUGCCCGGAGCCCUGCUCAUCAAUGAAAAACCCAUAUGUAAUAAUCGAAUUCAUUUAЖCAUGAAUCUUGAGUACGUGGACCAUUGCUUGCAUGUUAACUUUUUGUUUUGUUUUGUUUUGUUUUGUUUUGCAUUUUUAACUCCAGAUAUCCUAAAGCUCAAUUGUUUGGUCUCUGGUUUUCAPCCUUAGAGAAGCCAUGGAGAACAGACUUGAAAAGUUUAGGAAAUCAUAAUGUGGCAGAGGUGGUGGGAAGAAGAAAGUUGAGCUUUUUCCCCUUGAGAAACUUCUGCAUUUAGUUUCUAUCUUUCCAGGCAAAACAAAUGGGUAUUCUUUUCAUACAACCAUUUUCAAAUGAACCUUAGAAAAGUCUUAЖCAUUUAAGGUAUUUUAUGCACAGAAUACACUUAGAUUGAUAGGAAAGAACUCGUAAUGGAGUUUGAGUAAAGAAAAUGACUGAUGUACUAAACCCAGUAAAAAUUGUUGAAAAUGUUAAAGGUCAGCAUGUUCUAAUUGGGAAUCUAGAUAUAGCUUAGAUUUCCUAUUGGCUUAGAGUAUUUGCUAUAACAAAUGAAGUGCAAUGACAAUUAUAUAUUCCUACUCGGUCAUACUG
Sequence (SHORT NAMES ENCODING) CGGGUGGGGAGGUGGGGUCCGGGUGUGCGCCGCGGCGCUGGCUGCGAAGGCAGUGGCCGAGGCGGGCUCCCUCUGGGCCGUGCCCGGCCUGGCUAACAAAGCCGCCGCGGCCUCUGUUGUGUGAUGGUGUCUUUUAUGAAUAAUCAAAAGCAGCAAAAGCCAACGCUAUCAGGCCAGCGUUUUAAAACUAGAAAAAGAGAUGAAAAAGAGAGGUUUGACCCUACUCAGUUUCAAGACUGUAUUAUUCAAGGCUUAACUGAAACCGGUACUGAUUUGGAAGCAGUAGCUAAGUUUCUUGAUGCUUCUGGAGCAAAACUUGAUUACCGUCGAUAUGCAGAAACACUCUUUGACAUUCUGGUGGCUGGUGGAAUGCUGGCCCCAGGUGGUACACUGGCAGAUGACAUGAUGCGUACAGAUGUCUGCGUGUUUGCAGCCCAAGAAGAUCUAGAGACCAUGCAAGCAUUUGCUCAGGUUUUUAm6ACAAGUUAAUCAGGCGCUACm6AAAUACCUGGAGAAAGGUUUUGAAGAUGAAGUAAAAAAGCUGCUGCUGUUCUUGAAGGGUUUUUCAGAGUCGGAGAGGAACAAGCUAGCUAUGUUGACUGGUGUUCUUCUGGCUAAUGGAACACUUAAUGCAYCCAUUCUUAAUAGCCUYUAUAAUGAAAAUUUGGUUAAAGAAGGAGUUUCAGCAGCUUUUGCUGUGAAGCUCUYUAAAUCAUGGAUAAAUGAAAAAGAUAUCAAUGCAGUAGCUGCAAGUCUUCGGAAAGUCAGCAUGGAUAACAGACUGAUGGAACUCUUUCCUGCCAAUAAGCAAAGUGUUGAACACUUCACAAAAUAUUUUACUGAGGCAGGCUUGAAAGAGCUUUCAGAAUAUGUUCGGAAUCAGCAAACCAUCGGAGCUCGUAAGGAGCUCCAGAAAGAACUUCAAGAACAGAUGUCCCGUGGUGAUCCAUUUAAGGAUAUAAUUUUAUAUGUCAAGGAGGAGAUGAAAAAAAACAACAUCCCAGAGCCAGUUGUCAUCGGAAUAGUCUGGUCAAGUGUAAUGAGCACUGUGGAAUGGAACAAAAAAGAGGAGCUUGUAGCAGAGCAAGCCAUCAAGCACUUGAAGCAAUACAGCCCUCUACUUGCUGCCUYUACUACUCAAGGUCAGUCUGAGCUGACUCUGUUACUGAAGAUUCAGGAGUAUUGCUAUGACAACAUUCAUUUCAUGAAAGCCUUCCAGAAAAUAGUGGUGCUUUUUUAUAAAGCUGAAGUCCUGAGCGAGGAGCCCAUUUUGAAGUGGUAUAAAGAUGCACAUGUUGCAAAGGGGAAGAGUGUUUUCCUUGAGCAAAUGAAAAAGUUUGUAGAAUGGCUCAAAAAUGCUGAAGAAGAAUCUGAAUCUGAAGCUGAAGAAGGUGACUGAAUUUUGAAACUACACCCUCAGUAAAGCAAACAGGAGUUGUAGAUAAAAUGUCAUGUCUCAUGUGUCCUGGUUCUUACm6AUCUUCCUACCYCCCUGUAUCAAGCAUGAUAUAAGGGCUUUCAUGGCAAAUUUUAUUUUAACUGUUUCUAUGGUUGCUGGAAAUGUUGGGUUUAGUUUCUAAAACCAUGUUUUAAGUAGCUACAGGAGCUAUAGAUUUGAAUCUAAUGUUGCAUUAGUCUUUUCAGUUAUCUUCUACCUCCUGUAUUUUCUACUGUAAUAAUGUAAUUUAAGGCCUUCCACAAUGAACAGUUCACUYUAUUCCCUGGGUUUUCUAUAAm6ACAGUUUUAAGGAUAUGAUUUGGUUAAAAAAUAAUUUGUUAUAAAAAUUCUGUUUGCAAAUUAAACUGGAAAAGUAUCCAGAGUCUCAAAAGGCAAUGAUUUGUGAGAUAAUAUGGCAUGCCCGGAGCCCUGCUCAUCAAUGAAAAACCCAUAUGUAAUAAUCGAAUUCAUUUAm6ACAUGAAUCUUGAGUACGUGGACCAUUGCUUGCAUGUUAACUUUUUGUUUUGUUUUGUUUUGUUUUGUUUUGCAUUUUUAACUCCAGAUAUCCUAAAGCUCAAUUGUUUGGUCUCUGGUUUUCAYCCUUAGAGAAGCCAUGGAGAACAGACUUGAAAAGUUUAGGAAAUCAUAAUGUGGCAGAGGUGGUGGGAAGAAGAAAGUUGAGCUUUUUCCCCUUGAGAAACUUCUGCAUUUAGUUUCUAUCUUUCCAGGCAAAACAAAUGGGUAUUCUUUUCAUACAACCAUUUUCAAAUGAACCUUAGAAAAGUCUUAm6ACAUUUAAGGUAUUUUAUGCACAGAAUACACUUAGAUUGAUAGGAAAGAACUCGUAAUGGAGUUUGAGUAAAGAAAAUGACUGAUGUACUAAACCCAGUAAAAAUUGUUGAAAAUGUUAAAGGUCAGCAUGUUCUAAUUGGGAAUCUAGAUAUAGCUUAGAUUUCCUAUUGGCUUAGAGUAUUUGCUAUAACAAAUGAAGUGCAAUGACAAUUAUAUAUUCCUACUCGGUCAUACUG
Sequence (MODOMICS CODE ENCODING) CGGGUGGGGAGGUGGGGUCCGGGUGUGCGCCGCGGCGCUGGCUGCGAAGGCAGUGGCCGAGGCGGGCUCCCUCUGGGCCGUGCCCGGCCUGGCUAACAAAGCCGCCGCGGCCUCUGUUGUGUGAUGGUGUCUUUUAUGAAUAAUCAAAAGCAGCAAAAGCCAACGCUAUCAGGCCAGCGUUUUAAAACUAGAAAAAGAGAUGAAAAAGAGAGGUUUGACCCUACUCAGUUUCAAGACUGUAUUAUUCAAGGCUUAACUGAAACCGGUACUGAUUUGGAAGCAGUAGCUAAGUUUCUUGAUGCUUCUGGAGCAAAACUUGAUUACCGUCGAUAUGCAGAAACACUCUUUGACAUUCUGGUGGCUGGUGGAAUGCUGGCCCCAGGUGGUACACUGGCAGAUGACAUGAUGCGUACAGAUGUCUGCGUGUUUGCAGCCCAAGAAGAUCUAGAGACCAUGCAAGCAUUUGCUCAGGUUUUUA2000000006ACAAGUUAAUCAGGCGCUAC2000000006AAAUACCUGGAGAAAGGUUUUGAAGAUGAAGUAAAAAAGCUGCUGCUGUUCUUGAAGGGUUUUUCAGAGUCGGAGAGGAACAAGCUAGCUAUGUUGACUGGUGUUCUUCUGGCUAAUGGAACACUUAAUGCA2000000009UCCAUUCUUAAUAGCCU2000000009UUAUAAUGAAAAUUUGGUUAAAGAAGGAGUUUCAGCAGCUUUUGCUGUGAAGCUCU2000000009UUAAAUCAUGGAUAAAUGAAAAAGAUAUCAAUGCAGUAGCUGCAAGUCUUCGGAAAGUCAGCAUGGAUAACAGACUGAUGGAACUCUUUCCUGCCAAUAAGCAAAGUGUUGAACACUUCACAAAAUAUUUUACUGAGGCAGGCUUGAAAGAGCUUUCAGAAUAUGUUCGGAAUCAGCAAACCAUCGGAGCUCGUAAGGAGCUCCAGAAAGAACUUCAAGAACAGAUGUCCCGUGGUGAUCCAUUUAAGGAUAUAAUUUUAUAUGUCAAGGAGGAGAUGAAAAAAAACAACAUCCCAGAGCCAGUUGUCAUCGGAAUAGUCUGGUCAAGUGUAAUGAGCACUGUGGAAUGGAACAAAAAAGAGGAGCUUGUAGCAGAGCAAGCCAUCAAGCACUUGAAGCAAUACAGCCCUCUACUUGCUGCCU2000000009UUACUACUCAAGGUCAGUCUGAGCUGACUCUGUUACUGAAGAUUCAGGAGUAUUGCUAUGACAACAUUCAUUUCAUGAAAGCCUUCCAGAAAAUAGUGGUGCUUUUUUAUAAAGCUGAAGUCCUGAGCGAGGAGCCCAUUUUGAAGUGGUAUAAAGAUGCACAUGUUGCAAAGGGGAAGAGUGUUUUCCUUGAGCAAAUGAAAAAGUUUGUAGAAUGGCUCAAAAAUGCUGAAGAAGAAUCUGAAUCUGAAGCUGAAGAAGGUGACUGAAUUUUGAAACUACACCCUCAGUAAAGCAAACAGGAGUUGUAGAUAAAAUGUCAUGUCUCAUGUGUCCUGGUUCUUAC2000000006AUCUUCCUACC2000000009UCCCUGUAUCAAGCAUGAUAUAAGGGCUUUCAUGGCAAAUUUUAUUUUAACUGUUUCUAUGGUUGCUGGAAAUGUUGGGUUUAGUUUCUAAAACCAUGUUUUAAGUAGCUACAGGAGCUAUAGAUUUGAAUCUAAUGUUGCAUUAGUCUUUUCAGUUAUCUUCUACCUCCUGUAUUUUCUACUGUAAUAAUGUAAUUUAAGGCCUUCCACAAUGAACAGUUCACU2000000009UUAUUCCCUGGGUUUUCUAUAA2000000006ACAGUUUUAAGGAUAUGAUUUGGUUAAAAAAUAAUUUGUUAUAAAAAUUCUGUUUGCAAAUUAAACUGGAAAAGUAUCCAGAGUCUCAAAAGGCAAUGAUUUGUGAGAUAAUAUGGCAUGCCCGGAGCCCUGCUCAUCAAUGAAAAACCCAUAUGUAAUAAUCGAAUUCAUUUA2000000006ACAUGAAUCUUGAGUACGUGGACCAUUGCUUGCAUGUUAACUUUUUGUUUUGUUUUGUUUUGUUUUGUUUUGCAUUUUUAACUCCAGAUAUCCUAAAGCUCAAUUGUUUGGUCUCUGGUUUUCA2000000009UCCUUAGAGAAGCCAUGGAGAACAGACUUGAAAAGUUUAGGAAAUCAUAAUGUGGCAGAGGUGGUGGGAAGAAGAAAGUUGAGCUUUUUCCCCUUGAGAAACUUCUGCAUUUAGUUUCUAUCUUUCCAGGCAAAACAAAUGGGUAUUCUUUUCAUACAACCAUUUUCAAAUGAACCUUAGAAAAGUCUUA2000000006ACAUUUAAGGUAUUUUAUGCACAGAAUACACUUAGAUUGAUAGGAAAGAACUCGUAAUGGAGUUUGAGUAAAGAAAAUGACUGAUGUACUAAACCCAGUAAAAAUUGUUGAAAAUGUUAAAGGUCAGCAUGUUCUAAUUGGGAAUCUAGAUAUAGCUUAGAUUUCCUAUUGGCUUAGAGUAUUUGCUAUAACAAAUGAAGUGCAAUGACAAUUAUAUAUUCCUACUCGGUCAUACUG

Score Table

Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.
Method Classification Score
Multiple direct experimental evidence 1
Direct experimental evidence 2
Inferred based on indirect experimental evidence 3
Predicted computationally 4
Evidence not yet annotated (Unknown) 5
Irrelevant 6

Modification Positions

Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.

Position in the Sequence 479 499 631 648 704 1127 1473 1484 1709 1731 1905 2029 2219
Modification Positions m6A m6A Y Y Y Y m6A Y Y m6A m6A Y m6A
Genomic Coordinates 2:200816332:+ 2:200816352:+ 2:200817199:+ 2:200817216:+ 2:200818004:+ 2:200820007:+ 2:200822256:+ 2:200822267:+ 2:200822492:+ 2:200822514:+ 2:200822688:+ 2:200822812:+ 2:200823002:+
Level of Experimental Evidence 3 3 3 3 3 3 3 3 3 3 3 3 3
Level of Experimental Reliability 3 3 3 3 3 3 3 3 3 3 3 3 3
Source Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM Sci-ModoM
EUFIDs BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
Mk6ShCGm6RBJ
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
3kRDPWwiRCgi
L6w2k2VEv4EY
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
Mk6ShCGm6RBJ
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
Mk6ShCGm6RBJ
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
Mk6ShCGm6RBJ
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
3kRDPWwiRCgi
L6w2k2VEv4EY
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
Mk6ShCGm6RBJ
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
Mk6ShCGm6RBJ
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
dA7YoLwHrzgR
JASnTTw2HeNE
ZuM5xpZmNuDL
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
Mk6ShCGm6RBJ
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8
BtsJQJ3DteUq
bXBqJigD9oV3
dknfVe6BK8aP
eGNFqdoGxzRm
f6YSioLdAWpr
iezFbUdmY3A6
S9vNeQQYrhac
Yfn77uLS5tv8