General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000249501
Gene ID:	ENSG00000128710
Gene Name:	HOXD10
Sequence (UNICHARACTER ENCODING)	CUAGAGAUGUCAGCCUACAAAGGЖCACAAUCUCUCUUCUUCAAAUUCUUCCCCAAAAUGUCCUUUCCCAACAGCUCUCCUGCUGCUAAUACUUUUUUAGUAGAUUCCUUGAUCAGUGCCUGCAGGAGUGЖCAGUUUUUAUUCCAGCAGCGCCAGCAUGUACAUGCCACCACCUAGCGCAGACAUGGGGЖCCUAUGGAAUGCAAACCUGUGGЖCUGCUCCCGUCUCUGGCCAAAAGAGAAGUGAACCACCAAAAUAUGGGUAUGAAUGUGCAUCCUUAUAUACCUCAAGUAGЖCAGUUGGЖCAGAUCCGAACAGAUCUUGUCGAAUAGAGCAACCUGUUACACAGCAAGUCCCCACUUGCUCCUUCACCACCAACAUUAAGGAAGAAUCCAAUUGCUGCAUGUAUUCUGAUAAGCGCAACAAЖCUCAUUUCGGCCGAGGUCCCUUCGUACCAGAGGCUGGUCCCUGAGUCUUGUCCCGUUGAGAACCCUGAGGUUCCCGUCCCUGGAUAUUUUAGЖCUGAGUCAGACCUACGCCACCGGGAAAACCCAAGAGUACAAUAAUAGCCCCGAAGGCAGCUCCACUGUCAUGCUCCAGCUCAACCCUCGUGGCGCGGCCAAGCCGCAGCUCUCCGCUGCCCAGCUGCAGAUGGAAAAGAAGAUGAACGAGCCCGUGAGCGGCCAGGAGCCCACCAAAGUCUCCCAGGUGGAGAGCCCCGAGGCCAAAGGCGGCCUUCCCGAAGAGAGGAGCUGCCUGGCUGAGGUCUCCGUGUCCAGUCCCGAAGUGCAGGAGAAGGAAAGCAAAGAGGAAAUCAAGUCUGAUACACCAACCAGCAAUUGGCUCACUGCAAAGAGUGGCAGAAAGAAGAGGUGCCCUUACACUAAGCACCAAACGCUGGAAUUAGAAAAAGAGUUCUUGUUCAAUAUGUACCUCACCCGCGAGCGCCGCCUAGAGAUCAGUAAGAGCGUUAACCUCACCGACAGGCAGGUCAAGAUUUGGUUUCAAAACCGCCGAAUGAAACUCAAGAAGAUGAGCCGAGAGAACCGGAUCCGAGAЖCUGACCGCCAACCUCACGUUUUCUUAGGUCUGAGGCCGGUCUGAGGCCGGUCAGAGGCCAGGЖUUGGAGAGGGGGCACCGCGUUCCAGGGCCCAGUGCUGGAGGЖCUGGGAAAGCGGAAACAAAACCUUCACCGCUCUUUGUUUGUUGUUUUGUUGUAUUUUGUUUUCCUGCUAGAAUGUGЖCUUUGGGGUCAUUAUGUUCGUGCUGCAAGUGAUCUGUAAUCCCUAUGAGUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAAAAACUUAGCACGUGUAAUUUAUUAUUUUUUCAUCGUAAUGCAGGGUAACUAUUAUUGCGCAUUUUCAUUUGGGUCUUAЖCUUAUUGGAЖCUGUAGAGCAPCCAUCCAPCCAUCCAPCCAGCAAUGUGACUUUUUCAUGUCUUUCCUAЖCACAAAAGGUCUAUGUGUGUGGUUAGUCCAUGAЖCUCAUGGCAUUUUGAAUACAPCCAGUACUPUAAAAAUGACAUAUAUAUUUAAAAAAAAAAGAUUAAGAAAACCCACAAGUUGGAGGGAGGGGGACUUAAAAAGCACAUUACAAUGUAUCUUUUCACAAAUGAAUUUAGCAGUUGUCCUUGGUGAGAUGGGAUAUUGGCGAUUUAUGCCUUGUAGCCUUUCCCUUGUGGUGCAUCUGUGGUUUGGUAGAAGUACAACAGCAACCUGUCCUUUCUGUGCAUGUUCUGGUCGCAUGUAUAAUGCAAUAAACUCUGGAAAUGA
Sequence (SHORT NAMES ENCODING)	CUAGAGAUGUCAGCCUACAAAGGm6ACACAAUCUCUCUUCUUCAAAUUCUUCCCCAAAAUGUCCUUUCCCAACAGCUCUCCUGCUGCUAAUACUUUUUUAGUAGAUUCCUUGAUCAGUGCCUGCAGGAGUGm6ACAGUUUUUAUUCCAGCAGCGCCAGCAUGUACAUGCCACCACCUAGCGCAGACAUGGGGm6ACCUAUGGAAUGCAAACCUGUGGm6ACUGCUCCCGUCUCUGGCCAAAAGAGAAGUGAACCACCAAAAUAUGGGUAUGAAUGUGCAUCCUUAUAUACCUCAAGUAGm6ACAGUUGGm6ACAGAUCCGAACAGAUCUUGUCGAAUAGAGCAACCUGUUACACAGCAAGUCCCCACUUGCUCCUUCACCACCAACAUUAAGGAAGAAUCCAAUUGCUGCAUGUAUUCUGAUAAGCGCAACAAm6ACUCAUUUCGGCCGAGGUCCCUUCGUACCAGAGGCUGGUCCCUGAGUCUUGUCCCGUUGAGAACCCUGAGGUUCCCGUCCCUGGAUAUUUUAGm6ACUGAGUCAGACCUACGCCACCGGGAAAACCCAAGAGUACAAUAAUAGCCCCGAAGGCAGCUCCACUGUCAUGCUCCAGCUCAACCCUCGUGGCGCGGCCAAGCCGCAGCUCUCCGCUGCCCAGCUGCAGAUGGAAAAGAAGAUGAACGAGCCCGUGAGCGGCCAGGAGCCCACCAAAGUCUCCCAGGUGGAGAGCCCCGAGGCCAAAGGCGGCCUUCCCGAAGAGAGGAGCUGCCUGGCUGAGGUCUCCGUGUCCAGUCCCGAAGUGCAGGAGAAGGAAAGCAAAGAGGAAAUCAAGUCUGAUACACCAACCAGCAAUUGGCUCACUGCAAAGAGUGGCAGAAAGAAGAGGUGCCCUUACACUAAGCACCAAACGCUGGAAUUAGAAAAAGAGUUCUUGUUCAAUAUGUACCUCACCCGCGAGCGCCGCCUAGAGAUCAGUAAGAGCGUUAACCUCACCGACAGGCAGGUCAAGAUUUGGUUUCAAAACCGCCGAAUGAAACUCAAGAAGAUGAGCCGAGAGAACCGGAUCCGAGAm6ACUGACCGCCAACCUCACGUUUUCUUAGGUCUGAGGCCGGUCUGAGGCCGGUCAGAGGCCAGGm6AUUGGAGAGGGGGCACCGCGUUCCAGGGCCCAGUGCUGGAGGm6ACUGGGAAAGCGGAAACAAAACCUUCACCGCUCUUUGUUUGUUGUUUUGUUGUAUUUUGUUUUCCUGCUAGAAUGUGm6ACUUUGGGGUCAUUAUGUUCGUGCUGCAAGUGAUCUGUAAUCCCUAUGAGUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAAAAACUUAGCACGUGUAAUUUAUUAUUUUUUCAUCGUAAUGCAGGGUAACUAUUAUUGCGCAUUUUCAUUUGGGUCUUAm6ACUUAUUGGAm6ACUGUAGAGCAYCCAUCCAYCCAUCCAYCCAGCAAUGUGACUUUUUCAUGUCUUUCCUAm6ACACAAAAGGUCUAUGUGUGUGGUUAGUCCAUGAm6ACUCAUGGCAUUUUGAAUACAYCCAGUACUYUAAAAAUGACAUAUAUAUUUAAAAAAAAAAGAUUAAGAAAACCCACAAGUUGGAGGGAGGGGGACUUAAAAAGCACAUUACAAUGUAUCUUUUCACAAAUGAAUUUAGCAGUUGUCCUUGGUGAGAUGGGAUAUUGGCGAUUUAUGCCUUGUAGCCUUUCCCUUGUGGUGCAUCUGUGGUUUGGUAGAAGUACAACAGCAACCUGUCCUUUCUGUGCAUGUUCUGGUCGCAUGUAUAAUGCAAUAAACUCUGGAAAUGA
Sequence (MODOMICS CODE ENCODING)	CUAGAGAUGUCAGCCUACAAAGG2000000006ACACAAUCUCUCUUCUUCAAAUUCUUCCCCAAAAUGUCCUUUCCCAACAGCUCUCCUGCUGCUAAUACUUUUUUAGUAGAUUCCUUGAUCAGUGCCUGCAGGAGUG2000000006ACAGUUUUUAUUCCAGCAGCGCCAGCAUGUACAUGCCACCACCUAGCGCAGACAUGGGG2000000006ACCUAUGGAAUGCAAACCUGUGG2000000006ACUGCUCCCGUCUCUGGCCAAAAGAGAAGUGAACCACCAAAAUAUGGGUAUGAAUGUGCAUCCUUAUAUACCUCAAGUAG2000000006ACAGUUGG2000000006ACAGAUCCGAACAGAUCUUGUCGAAUAGAGCAACCUGUUACACAGCAAGUCCCCACUUGCUCCUUCACCACCAACAUUAAGGAAGAAUCCAAUUGCUGCAUGUAUUCUGAUAAGCGCAACAA2000000006ACUCAUUUCGGCCGAGGUCCCUUCGUACCAGAGGCUGGUCCCUGAGUCUUGUCCCGUUGAGAACCCUGAGGUUCCCGUCCCUGGAUAUUUUAG2000000006ACUGAGUCAGACCUACGCCACCGGGAAAACCCAAGAGUACAAUAAUAGCCCCGAAGGCAGCUCCACUGUCAUGCUCCAGCUCAACCCUCGUGGCGCGGCCAAGCCGCAGCUCUCCGCUGCCCAGCUGCAGAUGGAAAAGAAGAUGAACGAGCCCGUGAGCGGCCAGGAGCCCACCAAAGUCUCCCAGGUGGAGAGCCCCGAGGCCAAAGGCGGCCUUCCCGAAGAGAGGAGCUGCCUGGCUGAGGUCUCCGUGUCCAGUCCCGAAGUGCAGGAGAAGGAAAGCAAAGAGGAAAUCAAGUCUGAUACACCAACCAGCAAUUGGCUCACUGCAAAGAGUGGCAGAAAGAAGAGGUGCCCUUACACUAAGCACCAAACGCUGGAAUUAGAAAAAGAGUUCUUGUUCAAUAUGUACCUCACCCGCGAGCGCCGCCUAGAGAUCAGUAAGAGCGUUAACCUCACCGACAGGCAGGUCAAGAUUUGGUUUCAAAACCGCCGAAUGAAACUCAAGAAGAUGAGCCGAGAGAACCGGAUCCGAGA2000000006ACUGACCGCCAACCUCACGUUUUCUUAGGUCUGAGGCCGGUCUGAGGCCGGUCAGAGGCCAGG2000000006AUUGGAGAGGGGGCACCGCGUUCCAGGGCCCAGUGCUGGAGG2000000006ACUGGGAAAGCGGAAACAAAACCUUCACCGCUCUUUGUUUGUUGUUUUGUUGUAUUUUGUUUUCCUGCUAGAAUGUG2000000006ACUUUGGGGUCAUUAUGUUCGUGCUGCAAGUGAUCUGUAAUCCCUAUGAGUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAAAAACUUAGCACGUGUAAUUUAUUAUUUUUUCAUCGUAAUGCAGGGUAACUAUUAUUGCGCAUUUUCAUUUGGGUCUUA2000000006ACUUAUUGGA2000000006ACUGUAGAGCA2000000009UCCAUCCA2000000009UCCAUCCA2000000009UCCAGCAAUGUGACUUUUUCAUGUCUUUCCUA2000000006ACACAAAAGGUCUAUGUGUGUGGUUAGUCCAUGA2000000006ACUCAUGGCAUUUUGAAUACA2000000009UCCAGUACU2000000009UUAAAAAUGACAUAUAUAUUUAAAAAAAAAAGAUUAAGAAAACCCACAAGUUGGAGGGAGGGGGACUUAAAAAGCACAUUACAAUGUAUCUUUUCACAAAUGAAUUUAGCAGUUGUCCUUGGUGAGAUGGGAUAUUGGCGAUUUAUGCCUUGUAGCCUUUCCCUUGUGGUGCAUCUGUGGUUUGGUAGAAGUACAACAGCAACCUGUCCUUUCUGUGCAUGUUCUGGUCGCAUGUAUAAUGCAAUAAACUCUGGAAAUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	24	130	189	212	292	300	422	515	1052	1115	1157	1234	1393	1403	1414	1422	1430	1462	1496	1517	1526
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	Y	Y	m6A	m6A	Y	Y
Genomic Coordinates	2:176116801:+	2:176116907:+	2:176116966:+	2:176116989:+	2:176117069:+	2:176117077:+	2:176117199:+	2:176117292:+	2:176119204:+	2:176119267:+	2:176119309:+	2:176119386:+	2:176119545:+	2:176119555:+	2:176119566:+	2:176119574:+	2:176119582:+	2:176119614:+	2:176119648:+	2:176119669:+	2:176119678:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8