General Data

RNA Type	tRNA
SOTerm	None
Original Source	LC530715.1
Secondary Structure	(((((((..((((.........)))).(((((.......)))))....(((((.....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GUUUAUGUѢLCUUACCUCCUCAAAGCAAPACACUGAA*APGUUUAGA?GGGCUCACAUCACCCCAUAAACACCA
Sequence (SHORT NAMES ENCODING)	GUUUAUGUpm1Apm2GCUUACCUCCUCAAAGCAApYACACUGAApms2i6AApYGUUUAGApm5CGGGCUCACAUCACCCCAUAAACACCA
Sequence (MODOMICS CODE ENCODING)	GUUUAUGU2000001551A2000002551GCUUACCUCCUCAAAGCAA2000009551UACACUGAA2002161551AA2000009551UGUUUAGA2000005551CGGGCUCACAUCACCCCAUAAACACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GUUUAUGUѢLCUUACCUCCUCA--AAGCAAPACACUGAA*APGUUUAGA?--------------------GGGCUCACAU--CACCCCAUAAACACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	9	10	28	37	39
Position in the sequence	10	11	32	41	43
Modification positions	pm1A	pm2G	pY	pms2i6A	pY
Source	32859890	32859890	32859890	32859890	32859890

Modification Annotation

_{Table containing the data present in the literature relating to the modification positions present in the RNA sequences. Some of the modified residuals may differ from the modifications originally present in MODOMICS. It follows the same format as the previous table. The table reports the scores that have been associated to the modified nucleotides so to have an estimation of the reliability of their presence.}

Position in the alignment	9	10	28	37	39
Position in the sequence	10	11	32	41	43
Source: 32859890	N	G+	G+	G+	G+	G+	G+	G+	N	N	G+	G+	G+	G+	N	N	N	N	N	N	ms2t6A	N	N	N	N	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	N	G+	G+	G+	G+	G+	N	N	N	N	N	N	N	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	N	G+	G+	G+	G+	G+	N	N	m1Y	N	N	N	N	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	cmnm5Um	N	N	N	N
Level of Experimental Reliability	2	2	2	2	2	2	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None
Level of Experimental Evidence	2	2	2	2	2	2	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None