RNA Type | tRNA |
---|---|
Original Source | LC530726.1 |
Secondary Structure | (((((((..(((((..))))).(((((.......)))))....(((((.....)))))))))))).... |
Sequence (UNICHARACTER ENCODING) | GGUAAAAUKLCUGAGUGAAGCAPPGGACUQUA*APCUAAAGA?AGGGGUUAGGCCUCUUUUUACCACCA |
Sequence (SHORT NAMES ENCODING) | GGUAAAAUpm1Gpm2GCUGAGUGAAGCApYpYGGACUpQUApms2i6AApYCUAAAGApm5CAGGGGUUAGGCCUCUUUUUACCACCA |
Sequence (MODOMICS CODE ENCODING) | GGUAAAAU2000001551G2000002551GCUGAGUGAAGCA2000009551U2000009551UGGACU2000042551GUA2002161551AA2000009551UCUAAAGA2000005551CAGGGGUUAGGCCUCUUUUUACCACCA |
Consensus Secondary Structure | .(((((((..((((......[....)))).(((((.......)))))........................(((((..]....)))))))))))).... |
Alignment with Modification | -GGUAAAAUKLCUGAGU-------GAAGCAPPGGACUQUA*APCUAAAGA?--------------------AGGGGUUAGG--CCUCUUUUUACCACCA |
Method Classification | Score |
---|---|
Multiple direct experimental evidence | 1 |
Direct experimental evidence | 2 |
Inferred based on indirect experimental evidence | 3 |
Predicted computationally | 4 |
Evidence not yet annotated (Unknown) | 5 |
Irrelevant | 6 |
Position in the alignment | 9 | 10 | 27 | 28 | 34 | 37 | 39 | 45B |
---|---|---|---|---|---|---|---|---|
Position in the sequence | 9 | 10 | 23 | 24 | 30 | 33 | 35 | 43 |
Modification positions | m1G | m2G | Y | Y | Q | ms2i6A | Y | m5C |
Source | 32859890 | 32859890 | 32859890 | 32859890 | 32859890 | 32859890 | 32859890 | 32859890 |
Position in the alignment | 9 | 10 | 27 | 28 | 34 | 37 | 39 | 45B |
---|---|---|---|---|---|---|---|---|
Position in the sequence | 9 | 10 | 23 | 24 | 30 | 33 | 35 | 43 |
Source: 32859890 | m1G | m2G | Y | Y | Q | ms2i6A | Y | m5C |
Level of Experimental Reliability | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |
Level of Experimental Evidence | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 |