General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000337859
Gene ID:	ENSG00000065548
Gene Name:	ZC3H15
Sequence (UNICHARACTER ENCODING)	GACUCGCUUUCCGUGCGGUGCGGCGAGUGAGGCCCCGGUCUUCCPCCUCGUCCUGCCGCAGGGCCAGAACCCCUGACGGUAUUCAGCUGCGCGUAAGUCUGGCCGGUGCCAUCUGUCUCCGCAAUGCCCCCCAAGAAACAGGCUCAGGCCGGGGGCAGCAAAAAGGCGGAGCAAAAAAAGAAGGAGAAGAUUAUCGAAGACAAAACUUUCGGUUUGAAGAAUAAGAAAGGAGCAAAGCAACAGAAGUUUAUCAAGGCUGUCACACAUCAAGUUAAAUUUGGUCAACAAAAUCCACGUCAGGUAGCACAGAGUGAAGCUGAAAAGAAAUUGAAGAAGGAUGACAAGAAGAAAGAAUUGCAGGAGCUAAAUGAGCUGUUCAAACCUGUAGUUGCUGCUCAAAAAAUAAGUAAAGGUGCAGAUCCCAAGUCUGUAGUAUGUGCAUUCUUCAAGCAAGGACAGUGUACUAAAGGAGAUAAGUGUAAGUUCUCCCAUGACUUGACUCUGGAGAGAAAAUGUGAAAAGCGAAGUGUUUACAUUGAUGCAAGAGAUGAAGAACUUGAAAAAGAUACUAUGGAUAAUUGGGAUGAGAAAAAGCUGGAAGAAGUAGUGAACAAGAAGCACGGUGAGGCGGAAAAGAAAAAACCAAAAACUCAAAUAGUGUGCAAGCAUUUCCUGGAAGCUAUUGAAAACAACAAGUAUGGCUGGUUUUGGGUAUGCCCUGGAGGGGGUGAUAUUUGCAUGUAUCGUCAUGCACUUCCPCCUGGAUUUGUGUUGAAAAAAGAUAAAAAGAAAGAAGAGAAAGAAGAUGAAAUUUCAUUAGAAGAUCUAAUUGAGAGAGAGBGUUCUGCCCUAGGUCCAAAUGUUACCAAAAUCACUCUAGAAUCUUUUCUUGCCUGGAAGAAAAGGAAAAGACAAGAAAAGAUUGAUAAACUUGAACAAGAUAUGGAAAGAAGGAAAGCUGACUUCAAAGCAGGGAAAGCACUAGUGAUCAGUGGUCGUGAAGUGUUUGAAUUUCGUCCUGAACUGGUCAAUGAUGAUGAUGAGGAAGCAGAUGAUACCCGCUACACCCAGGGAЖCAGGUGGUGAUGAGGUUGAUGAUUCAGUGAGUGUAAAUGACAUAGAUUUAAGCCUGUACAPCCCAAGAGAUGUAGAUGAAACAGGUAUUACUGUAGCCAGUCUUGAAAGAUUCAGCACAUAUACUUCAGAUAAAGAUGAAAACAAAUUAAGUGAAGCUUCUGGAGGUAGGGCUGAAAAUGGUGAAAGAAGUGACUUGGAAGAGGACAACGAGAGGGAGGGAACGGAAAAUGGAGCCAUUGAUGCUGUUCCUGUUGAUGAAAAUCUUUUCACUGGAGAGGAUUUGGAUGAЖCUAGAAGAAGAAUUAAAUACЖCUUGAUUUAGAAGAAUGACACCAAACACAUCGCUGAAAAAAUUAAGUCAGCUCAGCACGAGUUGAAAUUGЖCUACЖUUAAUUUCUUUCCACCUAGAAUCAACAGGAUGUUUAUUUCCUAUGCUGAUUCUGGAGGAGUUAЖCCPCCUGCAAAAAAGGCAUCUUGUCCCUACAUCUUCUCUUCUGACUUUGGCUACAUCUCAUAGUAAGUUCAGAGUAGUUCAUGAUAAAUUGAAAAUAUAAUGGUCAUUGCAGAAAAUGAUUGAUGUUGUAЖCUGUCCACCCAAGUAAGAAGUGUAUCUGCCUUUCCAUCUUUUGGUUUUCAUUUGGGCAUGUGCUAUUACCAGAAACAACAAACUUAUAUUUAAAAUACCCUUCAUUUGACACAGUUUUUAAUGAGUGAUUUAAUUUCCUCUGUAUUUGUAUGUUUAGAAGЖCUGCCUAAAACAUGAGCACUGUACUUCAUAAAGGAAACUGCGUAUGCAGAUUCAGUAUUGUGUAUCUUUGGACAAUUAGAUGGЖCAUUUAAAAUGGAACUUCUUUUAUCUGACAGGAUCAGCUACAAUGCCCUGUGUUAAAUUGUUUAAAAGUUUCCCUUUUCUUUUUUGCCAAUAAAGUUGUAAAUAAAGACCAUCAUACAUUAAAAUCCAAA
Sequence (SHORT NAMES ENCODING)	GACUCGCUUUCCGUGCGGUGCGGCGAGUGAGGCCCCGGUCUUCCYCCUCGUCCUGCCGCAGGGCCAGAACCCCUGACGGUAUUCAGCUGCGCGUAAGUCUGGCCGGUGCCAUCUGUCUCCGCAAUGCCCCCCAAGAAACAGGCUCAGGCCGGGGGCAGCAAAAAGGCGGAGCAAAAAAAGAAGGAGAAGAUUAUCGAAGACAAAACUUUCGGUUUGAAGAAUAAGAAAGGAGCAAAGCAACAGAAGUUUAUCAAGGCUGUCACACAUCAAGUUAAAUUUGGUCAACAAAAUCCACGUCAGGUAGCACAGAGUGAAGCUGAAAAGAAAUUGAAGAAGGAUGACAAGAAGAAAGAAUUGCAGGAGCUAAAUGAGCUGUUCAAACCUGUAGUUGCUGCUCAAAAAAUAAGUAAAGGUGCAGAUCCCAAGUCUGUAGUAUGUGCAUUCUUCAAGCAAGGACAGUGUACUAAAGGAGAUAAGUGUAAGUUCUCCCAUGACUUGACUCUGGAGAGAAAAUGUGAAAAGCGAAGUGUUUACAUUGAUGCAAGAGAUGAAGAACUUGAAAAAGAUACUAUGGAUAAUUGGGAUGAGAAAAAGCUGGAAGAAGUAGUGAACAAGAAGCACGGUGAGGCGGAAAAGAAAAAACCAAAAACUCAAAUAGUGUGCAAGCAUUUCCUGGAAGCUAUUGAAAACAACAAGUAUGGCUGGUUUUGGGUAUGCCCUGGAGGGGGUGAUAUUUGCAUGUAUCGUCAUGCACUUCCYCCUGGAUUUGUGUUGAAAAAAGAUAAAAAGAAAGAAGAGAAAGAAGAUGAAAUUUCAUUAGAAGAUCUAAUUGAGAGAGAGCmGUUCUGCCCUAGGUCCAAAUGUUACCAAAAUCACUCUAGAAUCUUUUCUUGCCUGGAAGAAAAGGAAAAGACAAGAAAAGAUUGAUAAACUUGAACAAGAUAUGGAAAGAAGGAAAGCUGACUUCAAAGCAGGGAAAGCACUAGUGAUCAGUGGUCGUGAAGUGUUUGAAUUUCGUCCUGAACUGGUCAAUGAUGAUGAUGAGGAAGCAGAUGAUACCCGCUACACCCAGGGAm6ACAGGUGGUGAUGAGGUUGAUGAUUCAGUGAGUGUAAAUGACAUAGAUUUAAGCCUGUACAYCCCAAGAGAUGUAGAUGAAACAGGUAUUACUGUAGCCAGUCUUGAAAGAUUCAGCACAUAUACUUCAGAUAAAGAUGAAAACAAAUUAAGUGAAGCUUCUGGAGGUAGGGCUGAAAAUGGUGAAAGAAGUGACUUGGAAGAGGACAACGAGAGGGAGGGAACGGAAAAUGGAGCCAUUGAUGCUGUUCCUGUUGAUGAAAAUCUUUUCACUGGAGAGGAUUUGGAUGAm6ACUAGAAGAAGAAUUAAAUACm6ACUUGAUUUAGAAGAAUGACACCAAACACAUCGCUGAAAAAAUUAAGUCAGCUCAGCACGAGUUGAAAUUGm6ACUACm6AUUAAUUUCUUUCCACCUAGAAUCAACAGGAUGUUUAUUUCCUAUGCUGAUUCUGGAGGAGUUAm6ACCYCCUGCAAAAAAGGCAUCUUGUCCCUACAUCUUCUCUUCUGACUUUGGCUACAUCUCAUAGUAAGUUCAGAGUAGUUCAUGAUAAAUUGAAAAUAUAAUGGUCAUUGCAGAAAAUGAUUGAUGUUGUAm6ACUGUCCACCCAAGUAAGAAGUGUAUCUGCCUUUCCAUCUUUUGGUUUUCAUUUGGGCAUGUGCUAUUACCAGAAACAACAAACUUAUAUUUAAAAUACCCUUCAUUUGACACAGUUUUUAAUGAGUGAUUUAAUUUCCUCUGUAUUUGUAUGUUUAGAAGm6ACUGCCUAAAACAUGAGCACUGUACUUCAUAAAGGAAACUGCGUAUGCAGAUUCAGUAUUGUGUAUCUUUGGACAAUUAGAUGGm6ACAUUUAAAAUGGAACUUCUUUUAUCUGACAGGAUCAGCUACAAUGCCCUGUGUUAAAUUGUUUAAAAGUUUCCCUUUUCUUUUUUGCCAAUAAAGUUGUAAAUAAAGACCAUCAUACAUUAAAAUCCAAA
Sequence (MODOMICS CODE ENCODING)	GACUCGCUUUCCGUGCGGUGCGGCGAGUGAGGCCCCGGUCUUCC2000000009UCCUCGUCCUGCCGCAGGGCCAGAACCCCUGACGGUAUUCAGCUGCGCGUAAGUCUGGCCGGUGCCAUCUGUCUCCGCAAUGCCCCCCAAGAAACAGGCUCAGGCCGGGGGCAGCAAAAAGGCGGAGCAAAAAAAGAAGGAGAAGAUUAUCGAAGACAAAACUUUCGGUUUGAAGAAUAAGAAAGGAGCAAAGCAACAGAAGUUUAUCAAGGCUGUCACACAUCAAGUUAAAUUUGGUCAACAAAAUCCACGUCAGGUAGCACAGAGUGAAGCUGAAAAGAAAUUGAAGAAGGAUGACAAGAAGAAAGAAUUGCAGGAGCUAAAUGAGCUGUUCAAACCUGUAGUUGCUGCUCAAAAAAUAAGUAAAGGUGCAGAUCCCAAGUCUGUAGUAUGUGCAUUCUUCAAGCAAGGACAGUGUACUAAAGGAGAUAAGUGUAAGUUCUCCCAUGACUUGACUCUGGAGAGAAAAUGUGAAAAGCGAAGUGUUUACAUUGAUGCAAGAGAUGAAGAACUUGAAAAAGAUACUAUGGAUAAUUGGGAUGAGAAAAAGCUGGAAGAAGUAGUGAACAAGAAGCACGGUGAGGCGGAAAAGAAAAAACCAAAAACUCAAAUAGUGUGCAAGCAUUUCCUGGAAGCUAUUGAAAACAACAAGUAUGGCUGGUUUUGGGUAUGCCCUGGAGGGGGUGAUAUUUGCAUGUAUCGUCAUGCACUUCC2000000009UCCUGGAUUUGUGUUGAAAAAAGAUAAAAAGAAAGAAGAGAAAGAAGAUGAAAUUUCAUUAGAAGAUCUAAUUGAGAGAGAG2000000090CGUUCUGCCCUAGGUCCAAAUGUUACCAAAAUCACUCUAGAAUCUUUUCUUGCCUGGAAGAAAAGGAAAAGACAAGAAAAGAUUGAUAAACUUGAACAAGAUAUGGAAAGAAGGAAAGCUGACUUCAAAGCAGGGAAAGCACUAGUGAUCAGUGGUCGUGAAGUGUUUGAAUUUCGUCCUGAACUGGUCAAUGAUGAUGAUGAGGAAGCAGAUGAUACCCGCUACACCCAGGGA2000000006ACAGGUGGUGAUGAGGUUGAUGAUUCAGUGAGUGUAAAUGACAUAGAUUUAAGCCUGUACA2000000009UCCCAAGAGAUGUAGAUGAAACAGGUAUUACUGUAGCCAGUCUUGAAAGAUUCAGCACAUAUACUUCAGAUAAAGAUGAAAACAAAUUAAGUGAAGCUUCUGGAGGUAGGGCUGAAAAUGGUGAAAGAAGUGACUUGGAAGAGGACAACGAGAGGGAGGGAACGGAAAAUGGAGCCAUUGAUGCUGUUCCUGUUGAUGAAAAUCUUUUCACUGGAGAGGAUUUGGAUGA2000000006ACUAGAAGAAGAAUUAAAUAC2000000006ACUUGAUUUAGAAGAAUGACACCAAACACAUCGCUGAAAAAAUUAAGUCAGCUCAGCACGAGUUGAAAUUG2000000006ACUAC2000000006AUUAAUUUCUUUCCACCUAGAAUCAACAGGAUGUUUAUUUCCUAUGCUGAUUCUGGAGGAGUUA2000000006ACC2000000009UCCUGCAAAAAAGGCAUCUUGUCCCUACAUCUUCUCUUCUGACUUUGGCUACAUCUCAUAGUAAGUUCAGAGUAGUUCAUGAUAAAUUGAAAAUAUAAUGGUCAUUGCAGAAAAUGAUUGAUGUUGUA2000000006ACUGUCCACCCAAGUAAGAAGUGUAUCUGCCUUUCCAUCUUUUGGUUUUCAUUUGGGCAUGUGCUAUUACCAGAAACAACAAACUUAUAUUUAAAAUACCCUUCAUUUGACACAGUUUUUAAUGAGUGAUUUAAUUUCCUCUGUAUUUGUAUGUUUAGAAG2000000006ACUGCCUAAAACAUGAGCACUGUACUUCAUAAAGGAAACUGCGUAUGCAGAUUCAGUAUUGUGUAUCUUUGGACAAUUAGAUGG2000000006ACAUUUAAAAUGGAACUUCUUUUAUCUGACAGGAUCAGCUACAAUGCCCUGUGUUAAAUUGUUUAAAAGUUUCCCUUUUCUUUUUUGCCAAUAAAGUUGUAAAUAAAGACCAUCAUACAUUAAAAUCCAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	45	759	841	1075	1136	1365	1386	1457	1462	1526	1529	1657	1818	1902
Modification Positions	Y	Y	Cm	m6A	Y	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A	m6A
Genomic Coordinates	2:186486304:+	2:186504133:+	2:186505451:+	2:186505827:+	2:186506759:+	2:186508694:+	2:186508715:+	2:186508786:+	2:186508791:+	2:186508855:+	2:186508858:+	2:186508986:+	2:186509147:+	2:186509231:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	8cMbzB4aD5Se ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6UuHp6YApVKv msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw KTLz8piFYdwC nfCHyrYzE6fB BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 8cMbzB4aD5Se ArijeGVTwYBw BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8