General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000392209
Gene ID:	ENSG00000163249
Gene Name:	CCNYL1
Sequence (UNICHARACTER ENCODING)	GAGGAGCUCCAGCCGCGCUCUCUCCCGGCAGUGGCUGUGCUUCACAGCGCUUGUUGGGUUCCCCACCCCUUUUAAAUAAGCCGGGCUGGUCACCGCCCUCGCAGACGAGUCAGCUUAAGGGAGGCGGCGGCAGCGCGGCGGUGGGGCCCCAAGCUGGGCCGGCGCGCGGGGUCGGCGGAGCUGUACUGCGCGUCCGACAUCUACGAGGCGGUGUCCGGGGACGCGGUGGCGGUAGCGCCCGCUGUGGUGGAGCCUGCCGAGUUGGAUUUCGGAGAGGGCGAGGGCCACCACCUGCAGCACAUCAGCGACCGCGAGAUGCCCGAAGAUUUAGCUUUGGAGUCAAACCCUUCUGACCAUCCAAGGGCAAGCACAAUUUUCCUGAGCAAAUCUCAAACGGAUGUGCGAGAAAAGAGGAAGAGCAACCAUUUGAACCAUGUAUCUCCAGGGCAGCUUACUAAAAAGUAUAGCUCAUGCUCAACAAUAUUUCUAGAUGACAGCACAGUCAGCCAGCCUAAUCUUAGAACCACAGUAAAAUGUGUGACCUUAGCAAUAUAUUACCACAUAAAGAACAGAGAUGCAAAUAGAUCCCUGGAUAUUUUUGAUGAGAGAUCACAUCCACUUACACGAGAAAAAGUUCCAGAGGAAUACUUUAAGCAUGAUCCUGAGCACAAAUUUAUUUACAGAUUUGUUCGUACUCUUUUUAGUGCUGCACAGCUAACAGCUGAAUGUGCAAUAGUAACUUUGGUUUACUUAGAAAGGCUUUUAACUUAUGCUGAAAUCGACAUUUGUCCCACCAACUGGAAAAGGAUUGUUCUGGGAGCCAUUCUUCUUGCCUCCAAGGUUUGGGACGAUCAGGCUGUAUGGAAUGUGGACUACUGCCAGAUCCUCAAGGACAUUACAGUUGAGGACAUGAAUGAAAUGGAAAGGCAUUUUCUGGAGCUUCUUCAGUUUAAUAUUAAUGUUCCUGCCAGUGUUUAUGCCAAAUACUACUUUGACCUUCGCUCCUUAGCAGAUGACAACAACCUGAAUUUUCUAUUUGCUCCUCUUAGCAAAGAAAGAGCACAGAACCUAGAGGCUAUUUCUAGAUUGUGUGAAGACAAAGЖCUUGUGUAGAGCCGCUAUGAGAAGGUCUUUCAGUGCUGAUAACUUCAUUGGUAUUCAGCGCUCUAAAGCCAUCCUCUCUUAAAAGGAGAAAUGAGGGGUUAUAACGUCAUGGGЖCCUUCAUCUACAAAGЖCUGGAGAAAUACCACCUUUCCUGCUCAAAAACCAGCAAAAUUAGUGUUUUCAUCAAAAGGAAAGAUCUCAAAUUCAAGAGЖCUCAUGGЖCAACAAGGAUUAUACUCCACAGGAAAGAAUGGGЖCCUUGUCAAUGCAACAAAACACUCUUCUGUCCUUUUUAAUGUAAACAGAGUUACAAAAACCACUCCAAAGUGAAGGCUCCCAUCCUACACACAGAUAUUUGCUUACUGUGUGGGCCGAUAGCUGUGAЖCUAUGUAAGGUUUUUUAAACAAUAGUUUAAAUUUUUAGACUUUAAAGACACUAACCAUAUAACUUUUAUGUUUCUUCCAGUUUCUCUCCCUCCCCCCGCAUUUUGCUGCAUAUGCCUUUAAAAUCAAUGCAGUAUUACCAUUAAAACAUGGGЖCUCUAACUAAAGCCACUUAGGAGCAGACAGCAGCGUUGUUAGGUACUGAAGGGUUCUUCCUCCCUACUGUUACCAUUGAAGCUGCUAGUCAUUGGCAAUCAUUUUAAACCAAAAAGCUGCUGGAUAACAUUUGUCAUUCAUAUUCUUUGCAAGCAUUACUUUAGCAUUUUAGCAUGUUUGGGGUCAUAAACAGAGGAAGUAUCAGUUAUUGAUAUCUACUUCUAUUGGAGUCCAUGUUGCAUUUCUUGUGAACUAUAAAUGGUGCUUCUCAUUUUCUGAUAAUUUUUCUCUUGCUAAAUAAAUGUAUUAAAAGAU
Sequence (SHORT NAMES ENCODING)	GAGGAGCUCCAGCCGCGCUCUCUCCCGGCAGUGGCUGUGCUUCACAGCGCUUGUUGGGUUCCCCACCCCUUUUAAAUAAGCCGGGCUGGUCACCGCCCUCGCAGACGAGUCAGCUUAAGGGAGGCGGCGGCAGCGCGGCGGUGGGGCCCCAAGCUGGGCCGGCGCGCGGGGUCGGCGGAGCUGUACUGCGCGUCCGACAUCUACGAGGCGGUGUCCGGGGACGCGGUGGCGGUAGCGCCCGCUGUGGUGGAGCCUGCCGAGUUGGAUUUCGGAGAGGGCGAGGGCCACCACCUGCAGCACAUCAGCGACCGCGAGAUGCCCGAAGAUUUAGCUUUGGAGUCAAACCCUUCUGACCAUCCAAGGGCAAGCACAAUUUUCCUGAGCAAAUCUCAAACGGAUGUGCGAGAAAAGAGGAAGAGCAACCAUUUGAACCAUGUAUCUCCAGGGCAGCUUACUAAAAAGUAUAGCUCAUGCUCAACAAUAUUUCUAGAUGACAGCACAGUCAGCCAGCCUAAUCUUAGAACCACAGUAAAAUGUGUGACCUUAGCAAUAUAUUACCACAUAAAGAACAGAGAUGCAAAUAGAUCCCUGGAUAUUUUUGAUGAGAGAUCACAUCCACUUACACGAGAAAAAGUUCCAGAGGAAUACUUUAAGCAUGAUCCUGAGCACAAAUUUAUUUACAGAUUUGUUCGUACUCUUUUUAGUGCUGCACAGCUAACAGCUGAAUGUGCAAUAGUAACUUUGGUUUACUUAGAAAGGCUUUUAACUUAUGCUGAAAUCGACAUUUGUCCCACCAACUGGAAAAGGAUUGUUCUGGGAGCCAUUCUUCUUGCCUCCAAGGUUUGGGACGAUCAGGCUGUAUGGAAUGUGGACUACUGCCAGAUCCUCAAGGACAUUACAGUUGAGGACAUGAAUGAAAUGGAAAGGCAUUUUCUGGAGCUUCUUCAGUUUAAUAUUAAUGUUCCUGCCAGUGUUUAUGCCAAAUACUACUUUGACCUUCGCUCCUUAGCAGAUGACAACAACCUGAAUUUUCUAUUUGCUCCUCUUAGCAAAGAAAGAGCACAGAACCUAGAGGCUAUUUCUAGAUUGUGUGAAGACAAAGm6ACUUGUGUAGAGCCGCUAUGAGAAGGUCUUUCAGUGCUGAUAACUUCAUUGGUAUUCAGCGCUCUAAAGCCAUCCUCUCUUAAAAGGAGAAAUGAGGGGUUAUAACGUCAUGGGm6ACCUUCAUCUACAAAGm6ACUGGAGAAAUACCACCUUUCCUGCUCAAAAACCAGCAAAAUUAGUGUUUUCAUCAAAAGGAAAGAUCUCAAAUUCAAGAGm6ACUCAUGGm6ACAACAAGGAUUAUACUCCACAGGAAAGAAUGGGm6ACCUUGUCAAUGCAACAAAACACUCUUCUGUCCUUUUUAAUGUAAACAGAGUUACAAAAACCACUCCAAAGUGAAGGCUCCCAUCCUACACACAGAUAUUUGCUUACUGUGUGGGCCGAUAGCUGUGAm6ACUAUGUAAGGUUUUUUAAACAAUAGUUUAAAUUUUUAGACUUUAAAGACACUAACCAUAUAACUUUUAUGUUUCUUCCAGUUUCUCUCCCUCCCCCCGCAUUUUGCUGCAUAUGCCUUUAAAAUCAAUGCAGUAUUACCAUUAAAACAUGGGm6ACUCUAACUAAAGCCACUUAGGAGCAGACAGCAGCGUUGUUAGGUACUGAAGGGUUCUUCCUCCCUACUGUUACCAUUGAAGCUGCUAGUCAUUGGCAAUCAUUUUAAACCAAAAAGCUGCUGGAUAACAUUUGUCAUUCAUAUUCUUUGCAAGCAUUACUUUAGCAUUUUAGCAUGUUUGGGGUCAUAAACAGAGGAAGUAUCAGUUAUUGAUAUCUACUUCUAUUGGAGUCCAUGUUGCAUUUCUUGUGAACUAUAAAUGGUGCUUCUCAUUUUCUGAUAAUUUUUCUCUUGCUAAAUAAAUGUAUUAAAAGAU
Sequence (MODOMICS CODE ENCODING)	GAGGAGCUCCAGCCGCGCUCUCUCCCGGCAGUGGCUGUGCUUCACAGCGCUUGUUGGGUUCCCCACCCCUUUUAAAUAAGCCGGGCUGGUCACCGCCCUCGCAGACGAGUCAGCUUAAGGGAGGCGGCGGCAGCGCGGCGGUGGGGCCCCAAGCUGGGCCGGCGCGCGGGGUCGGCGGAGCUGUACUGCGCGUCCGACAUCUACGAGGCGGUGUCCGGGGACGCGGUGGCGGUAGCGCCCGCUGUGGUGGAGCCUGCCGAGUUGGAUUUCGGAGAGGGCGAGGGCCACCACCUGCAGCACAUCAGCGACCGCGAGAUGCCCGAAGAUUUAGCUUUGGAGUCAAACCCUUCUGACCAUCCAAGGGCAAGCACAAUUUUCCUGAGCAAAUCUCAAACGGAUGUGCGAGAAAAGAGGAAGAGCAACCAUUUGAACCAUGUAUCUCCAGGGCAGCUUACUAAAAAGUAUAGCUCAUGCUCAACAAUAUUUCUAGAUGACAGCACAGUCAGCCAGCCUAAUCUUAGAACCACAGUAAAAUGUGUGACCUUAGCAAUAUAUUACCACAUAAAGAACAGAGAUGCAAAUAGAUCCCUGGAUAUUUUUGAUGAGAGAUCACAUCCACUUACACGAGAAAAAGUUCCAGAGGAAUACUUUAAGCAUGAUCCUGAGCACAAAUUUAUUUACAGAUUUGUUCGUACUCUUUUUAGUGCUGCACAGCUAACAGCUGAAUGUGCAAUAGUAACUUUGGUUUACUUAGAAAGGCUUUUAACUUAUGCUGAAAUCGACAUUUGUCCCACCAACUGGAAAAGGAUUGUUCUGGGAGCCAUUCUUCUUGCCUCCAAGGUUUGGGACGAUCAGGCUGUAUGGAAUGUGGACUACUGCCAGAUCCUCAAGGACAUUACAGUUGAGGACAUGAAUGAAAUGGAAAGGCAUUUUCUGGAGCUUCUUCAGUUUAAUAUUAAUGUUCCUGCCAGUGUUUAUGCCAAAUACUACUUUGACCUUCGCUCCUUAGCAGAUGACAACAACCUGAAUUUUCUAUUUGCUCCUCUUAGCAAAGAAAGAGCACAGAACCUAGAGGCUAUUUCUAGAUUGUGUGAAGACAAAG2000000006ACUUGUGUAGAGCCGCUAUGAGAAGGUCUUUCAGUGCUGAUAACUUCAUUGGUAUUCAGCGCUCUAAAGCCAUCCUCUCUUAAAAGGAGAAAUGAGGGGUUAUAACGUCAUGGG2000000006ACCUUCAUCUACAAAG2000000006ACUGGAGAAAUACCACCUUUCCUGCUCAAAAACCAGCAAAAUUAGUGUUUUCAUCAAAAGGAAAGAUCUCAAAUUCAAGAG2000000006ACUCAUGG2000000006ACAACAAGGAUUAUACUCCACAGGAAAGAAUGGG2000000006ACCUUGUCAAUGCAACAAAACACUCUUCUGUCCUUUUUAAUGUAAACAGAGUUACAAAAACCACUCCAAAGUGAAGGCUCCCAUCCUACACACAGAUAUUUGCUUACUGUGUGGGCCGAUAGCUGUGA2000000006ACUAUGUAAGGUUUUUUAAACAAUAGUUUAAAUUUUUAGACUUUAAAGACACUAACCAUAUAACUUUUAUGUUUCUUCCAGUUUCUCUCCCUCCCCCCGCAUUUUGCUGCAUAUGCCUUUAAAAUCAAUGCAGUAUUACCAUUAAAACAUGGG2000000006ACUCUAACUAAAGCCACUUAGGAGCAGACAGCAGCGUUGUUAGGUACUGAAGGGUUCUUCCUCCCUACUGUUACCAUUGAAGCUGCUAGUCAUUGGCAAUCAUUUUAAACCAAAAAGCUGCUGGAUAACAUUUGUCAUUCAUAUUCUUUGCAAGCAUUACUUUAGCAUUUUAGCAUGUUUGGGGUCAUAAACAGAGGAAGUAUCAGUUAUUGAUAUCUACUUCUAUUGGAGUCCAUGUUGCAUUUCUUGUGAACUAUAAAUGGUGCUUCUCAUUUUCUGAUAAUUUUUCUCUUGCUAAAUAAAUGUAUUAAAAGAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1103	1217	1233	1314	1322	1356	1484	1637
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	2:207753616:+	2:207753730:+	2:207753746:+	2:207753827:+	2:207753835:+	2:207753869:+	2:207753997:+	2:207754150:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL	6AyXsheySjfx VL7zkHvkfkoB WdHxkJGRmFxn nfCHyrYzE6fB	msuJfBpJvM5H VL7zkHvkfkoB WdHxkJGRmFxn aJksAshEgQ8U nfCHyrYzE6fB	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9	6AyXsheySjfx 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G