General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000410055
Gene ID:	ENSG00000152256
Gene Name:	PDK1
Sequence (UNICHARACTER ENCODING)	GAUCCCCGCCCCUGCUGCCCGCCACGUCCCUCACGUACCACUCGGCAGAGGCGCGGGGAAACCUGGCGUACUGGCUGUGGCUUCUCUAGCGGGACUCGGCAUGAGGCUGGCGCGGCUGCUUCGCGGAGCCGCCUUGGCCGGCCCGGGCCCGGGGCUGCGCGCCGCCGGCUUCAGCCGCAGCUUCAGCUCGGACUCGGGCUCCAGCCCGGCGUCCGAGCGCGGCGUUCCGGGCCAGGUGGACUUCUACGCGCGCUUCUCGCCGUCCCCGCUCUCCAUGAAGCAGUUCCUGGACUUCGGAUCAGUGAAUGCUUGUGAAAAGACCUCAUUUAUGUUUCUGCGGCAAGAGUUGCCUGUCAGACUGGCAAAUAUAAUGAAAGAAAUAAGUCUCCUUCCAGAUAAUCUUCUCAGGACACCAUCCGUUCAAUUGGUACAAAGCUGGUAUAUCCAGAGUCUUCAGGAGCUUCUUGAUUUUAAGGACAAAAGUGCUGAGGAUGCUAAAGCUAUUUAUGACUUUACAGAUACUGUGAUACGGAUCAGAAACCGACACAAUGAUGUCAUUCCCACAAUGGCCCAGGGUGUGAUUGAAUACAAGGAGAGCUUUGGGGUGGAUCCUGUCACCAGCCAGAAUGUUCAGUACUUUUUGGAUCGAUUCUACAUGAGUCGCAUUUCAAUUAGAAUGUUACUCAAUCAGCACUCUUUAUUGUUUGGUGGAAAAGGCAAAGGAAGUCCAUCUCAUCGAAAACACAUUGGAAGCAUAAAUCCAAACUGCAAUGUACUUGAAGUUAUUAAAGAUGGCUAUGAAAAUGCUAGGCGUCUGUGUGAUUUGUAUUAUAUUAACUCUCCCGAACUAGAACUUGAAGAACUAAAUGCAAAAUCACCAGGACAGCCAAUACAAGUGGUUUAUGUACCAUCCCAUCUCUAUCACAUGGUGUUUGAACUUUUCAAGAAUGCAAUGAGAGCCACUAUGGAACACCAUGCCAACAGAGGUGUUUACCCCCCUAUUCAAGUUCAUGUCACGCUGGGUAAUGAGGAUUUGACUGUGAAGAUGAGUGACCGAGGAGGUGGCGUUCCUUUGAGGAAAAUUGACAGACUUUUCAACUACAUGUAUUCAACUGCACCAAGACCUCGUGUUGAGACCUCCCGCGCAGUGCCUCUGGCUGGUUUUGGUUAUGGAUUGCCCAUAUCACGUCUUUACGCACAAUACUUCCAAGGAGACCUGAAGCUGUAUUCCCUAGAGGGUUACGGGACAGAUGCAGUUAUCUACAUUAAGGCUCUGUCAACAGACUCAAUAGAAAGACUCCCAGUGUAUAACAAAGCUGCCUGGAAGCAUUACAACACCAACCACGAGGCUGAUGACUGGUGCGUCCCCAGCAGAGAACCCAAAGACAUGACGACGUUCCGCAGUGCCUAGACACACUUGGGACAUCGGAAAAUCCAAAUGUGGCUUUUGUAUUAAAUUUGGAAGUGUGGCCCAGAGUUGCUCAGAAUUGGAGCAGAGCCUGAGACGUAUCUGCAGAUCCUGUCAUCAGCUGGCAAGUCCAGGAGACUGUGUCAUUUAGAGЖCUGUGUUGUUAGUUAUCCCUCAACAUCUUCUAAGGUGGCAGGAAAUAAUAUUGGAAAUAACAUUUUAAAGUAAAAAUUUUAAAGUUUAAAGAAGAGUUUUGCCACUUAAACAGGGGAGCUUUGUCUGGAAAAUACACUGAGUUGAAACACUUCAPCCUUGGAAGGAUUAUAUAAGAUGAACAGUUGUGAUAAAUGUGUAGAUUAGAGGGAUGUGAAUGGGCAGUUAGUCCAGUGCCCUCAUUUAAGAGGCCAAGAUCCUGAUUCAGAGGAGGCAUCCUUUGCCCAGAGCUGCUUAGCUAAUCUGACCAAAUGUUGGGAAAAAUGUCUCACCUAACCCACUAUUCCUUAAUUAUGGAUUUUGUGAAAAACAAUAGAACAUGUUAAUGAGUAAUUUAUAUUAGUUCGAUGUAUUACAAUUUUUUAGCUPUAAAUUACAGUUUUCUUAUAAUGUUGAAAUGUUUUAGAAUCCUUUGAAUCUAAGUAUUUGUUUCCUAAAUGAAACAUUUGUACAACAUUUGAUGUUUUUACUUAUGAAAUAUUCUCCUCCCCCAAGAAAAUUUAAACUUUUUCUCUCUAUUUAAAAGCUAAGAAAUGUUUUAAAGGAAAAAUGAAAUUAUCUUCCUPUAGCUUAUUUUUAAGGUAAAЖCAGCUUUUUACUCUGUUAUUGUGGUAAUGGACAGAAUAUUACAUACAAAAAUAUUCUGGGAGAGCUUUUUCCUAGUUGGUUUUAAAUCAUUGUGCCACCUGAAAGGUUUUUAGAUUUUAUAGGAGCUAAUUUGUCCACCAGCAUUAAUGUAACACAGUGUAGUUAUGAAAAUAUAUUGAAGGACAGGAAGUGGACACGAAGUGAUUUUUGUAACCUGAGCAGUUAAUGAAUGUGCCAACAUUUUCUAGGAAGGGACAGCAAGAAUAUUCUGCUCUGUAGUUAAAAUACUGGCUGGCUUUUGAUGUCUUCAUGCUUAAUUGUGAUCACUUUCUUGCACUGUGAUGUUUUUACGUGAAUAUGUUGAAGUAGAAGUCUACCAUAUUAUUUUAUAAAAUGUUUUCUGUAUGGCAAUAAACUGAAAACAUGGAUCAACCCUUCUUUUGAAAAUAAACUGAGUCAAUUUAGCCUUUUAAAAAUAUAGUCAUCUCUUUUAAAUAGAAUCCUCUUCCACCAUCAAGGCUCAACAUUUUGUAAGCAUCCAAAAAAUUGGUAAUUAGGGGGCUUGCACUAAAUUUCACUAUCUUCAGUAGAGAGGAACUGUUUGGAACUUAGAUUUCCAAUGUGUAUAUUCUAAUGGAGAAAGCAAGAGGUAGAGUUUGUAUGUUUGACUUACCUUAGAUUUUUAUUUUCCAUACAUACUGCAAAUGAUUGACUUGUUGCAUAAAUGAAGAUCUUCUGUUGUGUGCUUUUCAAACACUGUAAAUAAAUUUGAAAUUUGAAUAA
Sequence (SHORT NAMES ENCODING)	GAUCCCCGCCCCUGCUGCCCGCCACGUCCCUCACGUACCACUCGGCAGAGGCGCGGGGAAACCUGGCGUACUGGCUGUGGCUUCUCUAGCGGGACUCGGCAUGAGGCUGGCGCGGCUGCUUCGCGGAGCCGCCUUGGCCGGCCCGGGCCCGGGGCUGCGCGCCGCCGGCUUCAGCCGCAGCUUCAGCUCGGACUCGGGCUCCAGCCCGGCGUCCGAGCGCGGCGUUCCGGGCCAGGUGGACUUCUACGCGCGCUUCUCGCCGUCCCCGCUCUCCAUGAAGCAGUUCCUGGACUUCGGAUCAGUGAAUGCUUGUGAAAAGACCUCAUUUAUGUUUCUGCGGCAAGAGUUGCCUGUCAGACUGGCAAAUAUAAUGAAAGAAAUAAGUCUCCUUCCAGAUAAUCUUCUCAGGACACCAUCCGUUCAAUUGGUACAAAGCUGGUAUAUCCAGAGUCUUCAGGAGCUUCUUGAUUUUAAGGACAAAAGUGCUGAGGAUGCUAAAGCUAUUUAUGACUUUACAGAUACUGUGAUACGGAUCAGAAACCGACACAAUGAUGUCAUUCCCACAAUGGCCCAGGGUGUGAUUGAAUACAAGGAGAGCUUUGGGGUGGAUCCUGUCACCAGCCAGAAUGUUCAGUACUUUUUGGAUCGAUUCUACAUGAGUCGCAUUUCAAUUAGAAUGUUACUCAAUCAGCACUCUUUAUUGUUUGGUGGAAAAGGCAAAGGAAGUCCAUCUCAUCGAAAACACAUUGGAAGCAUAAAUCCAAACUGCAAUGUACUUGAAGUUAUUAAAGAUGGCUAUGAAAAUGCUAGGCGUCUGUGUGAUUUGUAUUAUAUUAACUCUCCCGAACUAGAACUUGAAGAACUAAAUGCAAAAUCACCAGGACAGCCAAUACAAGUGGUUUAUGUACCAUCCCAUCUCUAUCACAUGGUGUUUGAACUUUUCAAGAAUGCAAUGAGAGCCACUAUGGAACACCAUGCCAACAGAGGUGUUUACCCCCCUAUUCAAGUUCAUGUCACGCUGGGUAAUGAGGAUUUGACUGUGAAGAUGAGUGACCGAGGAGGUGGCGUUCCUUUGAGGAAAAUUGACAGACUUUUCAACUACAUGUAUUCAACUGCACCAAGACCUCGUGUUGAGACCUCCCGCGCAGUGCCUCUGGCUGGUUUUGGUUAUGGAUUGCCCAUAUCACGUCUUUACGCACAAUACUUCCAAGGAGACCUGAAGCUGUAUUCCCUAGAGGGUUACGGGACAGAUGCAGUUAUCUACAUUAAGGCUCUGUCAACAGACUCAAUAGAAAGACUCCCAGUGUAUAACAAAGCUGCCUGGAAGCAUUACAACACCAACCACGAGGCUGAUGACUGGUGCGUCCCCAGCAGAGAACCCAAAGACAUGACGACGUUCCGCAGUGCCUAGACACACUUGGGACAUCGGAAAAUCCAAAUGUGGCUUUUGUAUUAAAUUUGGAAGUGUGGCCCAGAGUUGCUCAGAAUUGGAGCAGAGCCUGAGACGUAUCUGCAGAUCCUGUCAUCAGCUGGCAAGUCCAGGAGACUGUGUCAUUUAGAGm6ACUGUGUUGUUAGUUAUCCCUCAACAUCUUCUAAGGUGGCAGGAAAUAAUAUUGGAAAUAACAUUUUAAAGUAAAAAUUUUAAAGUUUAAAGAAGAGUUUUGCCACUUAAACAGGGGAGCUUUGUCUGGAAAAUACACUGAGUUGAAACACUUCAYCCUUGGAAGGAUUAUAUAAGAUGAACAGUUGUGAUAAAUGUGUAGAUUAGAGGGAUGUGAAUGGGCAGUUAGUCCAGUGCCCUCAUUUAAGAGGCCAAGAUCCUGAUUCAGAGGAGGCAUCCUUUGCCCAGAGCUGCUUAGCUAAUCUGACCAAAUGUUGGGAAAAAUGUCUCACCUAACCCACUAUUCCUUAAUUAUGGAUUUUGUGAAAAACAAUAGAACAUGUUAAUGAGUAAUUUAUAUUAGUUCGAUGUAUUACAAUUUUUUAGCUYUAAAUUACAGUUUUCUUAUAAUGUUGAAAUGUUUUAGAAUCCUUUGAAUCUAAGUAUUUGUUUCCUAAAUGAAACAUUUGUACAACAUUUGAUGUUUUUACUUAUGAAAUAUUCUCCUCCCCCAAGAAAAUUUAAACUUUUUCUCUCUAUUUAAAAGCUAAGAAAUGUUUUAAAGGAAAAAUGAAAUUAUCUUCCUYUAGCUUAUUUUUAAGGUAAAm6ACAGCUUUUUACUCUGUUAUUGUGGUAAUGGACAGAAUAUUACAUACAAAAAUAUUCUGGGAGAGCUUUUUCCUAGUUGGUUUUAAAUCAUUGUGCCACCUGAAAGGUUUUUAGAUUUUAUAGGAGCUAAUUUGUCCACCAGCAUUAAUGUAACACAGUGUAGUUAUGAAAAUAUAUUGAAGGACAGGAAGUGGACACGAAGUGAUUUUUGUAACCUGAGCAGUUAAUGAAUGUGCCAACAUUUUCUAGGAAGGGACAGCAAGAAUAUUCUGCUCUGUAGUUAAAAUACUGGCUGGCUUUUGAUGUCUUCAUGCUUAAUUGUGAUCACUUUCUUGCACUGUGAUGUUUUUACGUGAAUAUGUUGAAGUAGAAGUCUACCAUAUUAUUUUAUAAAAUGUUUUCUGUAUGGCAAUAAACUGAAAACAUGGAUCAACCCUUCUUUUGAAAAUAAACUGAGUCAAUUUAGCCUUUUAAAAAUAUAGUCAUCUCUUUUAAAUAGAAUCCUCUUCCACCAUCAAGGCUCAACAUUUUGUAAGCAUCCAAAAAAUUGGUAAUUAGGGGGCUUGCACUAAAUUUCACUAUCUUCAGUAGAGAGGAACUGUUUGGAACUUAGAUUUCCAAUGUGUAUAUUCUAAUGGAGAAAGCAAGAGGUAGAGUUUGUAUGUUUGACUUACCUUAGAUUUUUAUUUUCCAUACAUACUGCAAAUGAUUGACUUGUUGCAUAAAUGAAGAUCUUCUGUUGUGUGCUUUUCAAACACUGUAAAUAAAUUUGAAAUUUGAAUAA
Sequence (MODOMICS CODE ENCODING)	GAUCCCCGCCCCUGCUGCCCGCCACGUCCCUCACGUACCACUCGGCAGAGGCGCGGGGAAACCUGGCGUACUGGCUGUGGCUUCUCUAGCGGGACUCGGCAUGAGGCUGGCGCGGCUGCUUCGCGGAGCCGCCUUGGCCGGCCCGGGCCCGGGGCUGCGCGCCGCCGGCUUCAGCCGCAGCUUCAGCUCGGACUCGGGCUCCAGCCCGGCGUCCGAGCGCGGCGUUCCGGGCCAGGUGGACUUCUACGCGCGCUUCUCGCCGUCCCCGCUCUCCAUGAAGCAGUUCCUGGACUUCGGAUCAGUGAAUGCUUGUGAAAAGACCUCAUUUAUGUUUCUGCGGCAAGAGUUGCCUGUCAGACUGGCAAAUAUAAUGAAAGAAAUAAGUCUCCUUCCAGAUAAUCUUCUCAGGACACCAUCCGUUCAAUUGGUACAAAGCUGGUAUAUCCAGAGUCUUCAGGAGCUUCUUGAUUUUAAGGACAAAAGUGCUGAGGAUGCUAAAGCUAUUUAUGACUUUACAGAUACUGUGAUACGGAUCAGAAACCGACACAAUGAUGUCAUUCCCACAAUGGCCCAGGGUGUGAUUGAAUACAAGGAGAGCUUUGGGGUGGAUCCUGUCACCAGCCAGAAUGUUCAGUACUUUUUGGAUCGAUUCUACAUGAGUCGCAUUUCAAUUAGAAUGUUACUCAAUCAGCACUCUUUAUUGUUUGGUGGAAAAGGCAAAGGAAGUCCAUCUCAUCGAAAACACAUUGGAAGCAUAAAUCCAAACUGCAAUGUACUUGAAGUUAUUAAAGAUGGCUAUGAAAAUGCUAGGCGUCUGUGUGAUUUGUAUUAUAUUAACUCUCCCGAACUAGAACUUGAAGAACUAAAUGCAAAAUCACCAGGACAGCCAAUACAAGUGGUUUAUGUACCAUCCCAUCUCUAUCACAUGGUGUUUGAACUUUUCAAGAAUGCAAUGAGAGCCACUAUGGAACACCAUGCCAACAGAGGUGUUUACCCCCCUAUUCAAGUUCAUGUCACGCUGGGUAAUGAGGAUUUGACUGUGAAGAUGAGUGACCGAGGAGGUGGCGUUCCUUUGAGGAAAAUUGACAGACUUUUCAACUACAUGUAUUCAACUGCACCAAGACCUCGUGUUGAGACCUCCCGCGCAGUGCCUCUGGCUGGUUUUGGUUAUGGAUUGCCCAUAUCACGUCUUUACGCACAAUACUUCCAAGGAGACCUGAAGCUGUAUUCCCUAGAGGGUUACGGGACAGAUGCAGUUAUCUACAUUAAGGCUCUGUCAACAGACUCAAUAGAAAGACUCCCAGUGUAUAACAAAGCUGCCUGGAAGCAUUACAACACCAACCACGAGGCUGAUGACUGGUGCGUCCCCAGCAGAGAACCCAAAGACAUGACGACGUUCCGCAGUGCCUAGACACACUUGGGACAUCGGAAAAUCCAAAUGUGGCUUUUGUAUUAAAUUUGGAAGUGUGGCCCAGAGUUGCUCAGAAUUGGAGCAGAGCCUGAGACGUAUCUGCAGAUCCUGUCAUCAGCUGGCAAGUCCAGGAGACUGUGUCAUUUAGAG2000000006ACUGUGUUGUUAGUUAUCCCUCAACAUCUUCUAAGGUGGCAGGAAAUAAUAUUGGAAAUAACAUUUUAAAGUAAAAAUUUUAAAGUUUAAAGAAGAGUUUUGCCACUUAAACAGGGGAGCUUUGUCUGGAAAAUACACUGAGUUGAAACACUUCA2000000009UCCUUGGAAGGAUUAUAUAAGAUGAACAGUUGUGAUAAAUGUGUAGAUUAGAGGGAUGUGAAUGGGCAGUUAGUCCAGUGCCCUCAUUUAAGAGGCCAAGAUCCUGAUUCAGAGGAGGCAUCCUUUGCCCAGAGCUGCUUAGCUAAUCUGACCAAAUGUUGGGAAAAAUGUCUCACCUAACCCACUAUUCCUUAAUUAUGGAUUUUGUGAAAAACAAUAGAACAUGUUAAUGAGUAAUUUAUAUUAGUUCGAUGUAUUACAAUUUUUUAGCU2000000009UUAAAUUACAGUUUUCUUAUAAUGUUGAAAUGUUUUAGAAUCCUUUGAAUCUAAGUAUUUGUUUCCUAAAUGAAACAUUUGUACAACAUUUGAUGUUUUUACUUAUGAAAUAUUCUCCUCCCCCAAGAAAAUUUAAACUUUUUCUCUCUAUUUAAAAGCUAAGAAAUGUUUUAAAGGAAAAAUGAAAUUAUCUUCCU2000000009UUAGCUUAUUUUUAAGGUAAA2000000006ACAGCUUUUUACUCUGUUAUUGUGGUAAUGGACAGAAUAUUACAUACAAAAAUAUUCUGGGAGAGCUUUUUCCUAGUUGGUUUUAAAUCAUUGUGCCACCUGAAAGGUUUUUAGAUUUUAUAGGAGCUAAUUUGUCCACCAGCAUUAAUGUAACACAGUGUAGUUAUGAAAAUAUAUUGAAGGACAGGAAGUGGACACGAAGUGAUUUUUGUAACCUGAGCAGUUAAUGAAUGUGCCAACAUUUUCUAGGAAGGGACAGCAAGAAUAUUCUGCUCUGUAGUUAAAAUACUGGCUGGCUUUUGAUGUCUUCAUGCUUAAUUGUGAUCACUUUCUUGCACUGUGAUGUUUUUACGUGAAUAUGUUGAAGUAGAAGUCUACCAUAUUAUUUUAUAAAAUGUUUUCUGUAUGGCAAUAAACUGAAAACAUGGAUCAACCCUUCUUUUGAAAAUAAACUGAGUCAAUUUAGCCUUUUAAAAAUAUAGUCAUCUCUUUUAAAUAGAAUCCUCUUCCACCAUCAAGGCUCAACAUUUUGUAAGCAUCCAAAAAAUUGGUAAUUAGGGGGCUUGCACUAAAUUUCACUAUCUUCAGUAGAGAGGAACUGUUUGGAACUUAGAUUUCCAAUGUGUAUAUUCUAAUGGAGAAAGCAAGAGGUAGAGUUUGUAUGUUUGACUUACCUUAGAUUUUUAUUUUCCAUACAUACUGCAAAUGAUUGACUUGUUGCAUAAAUGAAGAUCUUCUGUUGUGUGCUUUUCAAACACUGUAAAUAAAUUUGAAAUUUGAAUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1562	1717	1989	2186	2207
Modification Positions	m6A	Y	Y	Y	m6A
Genomic Coordinates	2:172597709:+	2:172597864:+	2:172598136:+	2:172598333:+	2:172598354:+
Level of Experimental Evidence	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8