General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000324266
Gene ID:	ENSG00000171853
Gene Name:	TRAPPC12
Sequence (UNICHARACTER ENCODING)	GCCUCGGGUUCCUGCAUCGGGCCUGAGCAGAACUAGGCGCGCCGCGGCCCGGCACGCGCAGGCGUACAGAGCUCCCCGGGGGUGCCAGUUCCUCUCCGAUUCCCGGCUUCUGUCACCUUCCUCACGGACCUUGGUCACGGCCGCAGGUGACCCCUUAGCCCAGCUCCAGUGGGCGGGUGGCAGGGUCAUGGAGGACGCUGGCGGCGGCGAGGAGЖCCCCGGCCCCGGAGGCCCCGCACCCCCCUCAGCUCGCGCCUCCGGAGGAGCAGGGGUUGCUCUUCCAGGAGGAAACCAUCGAUCUUGGCGGAGAUGAGUUUGGAUCCGAAGAGAACGAGACCGCAUCGGAAGGCUCGAGUCCUCUCGCGGACAAGCUGAACGAЖCACAUGAUGGAGAGCGUCCUCAUCUCUGACUCCCCCAACAGCGAGGGCGACGCGGGCGACCUGGGCCGAGUGCGGGACGAAGCUGAGCCCGGAGGGGAAGGCGACCCAGGCCCGGAGCCCGCGGGCACCCCGAGUCCCAGCGGCGAGGCCGACGGCGACUGUGCCCCCGAGGACGCGGCACCCAGUAGCGGAGGGGCCCCGAGGCAGGACGCGGCCCGCGAGGUCCCAGGCAGCGAAGCCGCGCGCCCGGAGCAGGAGCCUCCCGUUGCGGAGCCGGUCCCGGUGUGCACCAUCUUCAGCCAGCGCGCGCCCCCAGCCUCCGGGGACGGCUUCGAGCCGCAGAUGGUGAAGUCGCCCAGCUUCGGUGGCGCCAGCGAGGCCUCGGCCAGGACACCGCCCCAGGUCGUGCAGCCCAGCCCCAGCCUCAGCACGUUCUUCGGAGACACGGCCGCCAGCCACUCCUUGGCCUCGGЖCUUCUUCGACUCCUPUACUACCUCCGCCUUCAUUUCCGUCAGCAAUCCCGGCGCGGGCUCCCCGGCCCCCGCCAGCCCGCCUCCCCUCGCUGUGCCCGGGACCGAGGGGCGCCCCGAACCCGUGGCCAUGCGAGGGCCCCAGGCAGCUGCGCCCCCGGCGUCGCCAGAGCCUUUCGCGCACAPCCAGGCAGUGUUUGCAGGGAGUGACGACCCCUUUGCCACCGCCCUGAGCAUGAGCGAGAUGGЖCCGGAGGAACGACGCCUGGCUUCCCGGCGAGGCUACGCGUGGAGUCCUGCGGGCCGUGGCCACCCAGCAGCGCGGCGCCGUGUUCGUGGACAAGGAGAACCUCACCAUGCCGGGCCUCAGGUUCGACAACAPCCAGGGAGAUGCAGUUAAAGACUUGAUGCUUCGCUUUCUGGGUGAAAAAGCUGCAGCAAAGAGACAAGUCCUAAAUGCCGACUCAGUGGAACAAUCUUUUGUUGGAUUGAAACAGCUAAUCAGCUGCAGAAACUGGAGGGCAGCAGUGGACCUGUGCGGACGUCUCCUCACAGCCCACGGCCAGGGCUACGGCAAGAGCGGGCUGCUCACCAGCCACACGACAGAUUCACUGCAGCUCUGGUUUGUCAGGCUGGCACUACUAGUGAAGUUGGGCCUUUUCCAGAAUGCUGAGAUGGAAUUUGAACCCUUCGGAAAUCUUGAUCAGCCAGAUCUPUAUUACGAGUACUACCCGCACGUGUACCCUGGGCGCAGGGGCUCCAUGGUCCCCUUCUCGAUGCGCAUCUUGCACGCGGAGCUUCAGCAGUACCUGGGGAACCCACAGGAGUCGCUGGAUAGACUGCACAAGGUGAAGACUGUCUGCAGCAAGAUCCUGGCCAAUUUGGAGCAAGGCUUAGCAGAAGACGGCGGCAUGAGCAGCGUGACUCAGGAGGGCAGACAAGCCUCUAUCCGGCUGUGGAGGUCACGUCUGGGCCGGGUGAUGUACUCCAUGGCAAACUGUCUGCUCCUGAUGAAGGAUUAUGUGCUGGCCGUGGAGGCGUAUCAUUCGGUUAUCAAGUAUUACCCAGAGCAAGAGCCCCAGCUGCUCAGCGGCAUCGGCCGGAUUUCCCUGCAGAUUGGAGACAUAAAAACAGCUGAAAAGUAUUUUCAAGACGUUGAGAAAGUAACACAGAAAUUAGAUGGACUACAGGGUAAAAUCAUGGUUUUGAUGAACAGCGCGUUCCUUCACCUCGGGCAGAAUAЖCUUUGCAGAAGCCCACAGGUUCUUCACAGAGAUCUUAAGGAUGGAUCCAAGAAACGCAGUGGCCAACAACAACGCUGCCGUGUGUCUGCUCUACCUGGGCAAGCUCAAGGЖCUCCCUGCGGCAGCUGGAGGCCAUGGUCCAGCAGGACCCCAGGCACUACCUGCACGAGAGCGUGCUCUUCAACCUGACCACCAUGUACGAGCUGGAGUCCUCACGGAGCAUGCAGAAGAAACЖGGCCCUGCUGGAGGCUGUCGCCGGCAAGGAGGGGGACAGCUUCAACACACAGUGCCUCAAGCUGGCCUAGCUGCCUCCAACACACUACGUCAGAAGGACCCGGGUCUUUGAAACUGUGUCUUGAAGCUAAUGUAUUAAUGUGACAUGGAGGAACUCAAUAAAACUCCUGCUUCA
Sequence (SHORT NAMES ENCODING)	GCCUCGGGUUCCUGCAUCGGGCCUGAGCAGAACUAGGCGCGCCGCGGCCCGGCACGCGCAGGCGUACAGAGCUCCCCGGGGGUGCCAGUUCCUCUCCGAUUCCCGGCUUCUGUCACCUUCCUCACGGACCUUGGUCACGGCCGCAGGUGACCCCUUAGCCCAGCUCCAGUGGGCGGGUGGCAGGGUCAUGGAGGACGCUGGCGGCGGCGAGGAGm6ACCCCGGCCCCGGAGGCCCCGCACCCCCCUCAGCUCGCGCCUCCGGAGGAGCAGGGGUUGCUCUUCCAGGAGGAAACCAUCGAUCUUGGCGGAGAUGAGUUUGGAUCCGAAGAGAACGAGACCGCAUCGGAAGGCUCGAGUCCUCUCGCGGACAAGCUGAACGAm6ACACAUGAUGGAGAGCGUCCUCAUCUCUGACUCCCCCAACAGCGAGGGCGACGCGGGCGACCUGGGCCGAGUGCGGGACGAAGCUGAGCCCGGAGGGGAAGGCGACCCAGGCCCGGAGCCCGCGGGCACCCCGAGUCCCAGCGGCGAGGCCGACGGCGACUGUGCCCCCGAGGACGCGGCACCCAGUAGCGGAGGGGCCCCGAGGCAGGACGCGGCCCGCGAGGUCCCAGGCAGCGAAGCCGCGCGCCCGGAGCAGGAGCCUCCCGUUGCGGAGCCGGUCCCGGUGUGCACCAUCUUCAGCCAGCGCGCGCCCCCAGCCUCCGGGGACGGCUUCGAGCCGCAGAUGGUGAAGUCGCCCAGCUUCGGUGGCGCCAGCGAGGCCUCGGCCAGGACACCGCCCCAGGUCGUGCAGCCCAGCCCCAGCCUCAGCACGUUCUUCGGAGACACGGCCGCCAGCCACUCCUUGGCCUCGGm6ACUUCUUCGACUCCUYUACUACCUCCGCCUUCAUUUCCGUCAGCAAUCCCGGCGCGGGCUCCCCGGCCCCCGCCAGCCCGCCUCCCCUCGCUGUGCCCGGGACCGAGGGGCGCCCCGAACCCGUGGCCAUGCGAGGGCCCCAGGCAGCUGCGCCCCCGGCGUCGCCAGAGCCUUUCGCGCACAYCCAGGCAGUGUUUGCAGGGAGUGACGACCCCUUUGCCACCGCCCUGAGCAUGAGCGAGAUGGm6ACCGGAGGAACGACGCCUGGCUUCCCGGCGAGGCUACGCGUGGAGUCCUGCGGGCCGUGGCCACCCAGCAGCGCGGCGCCGUGUUCGUGGACAAGGAGAACCUCACCAUGCCGGGCCUCAGGUUCGACAACAYCCAGGGAGAUGCAGUUAAAGACUUGAUGCUUCGCUUUCUGGGUGAAAAAGCUGCAGCAAAGAGACAAGUCCUAAAUGCCGACUCAGUGGAACAAUCUUUUGUUGGAUUGAAACAGCUAAUCAGCUGCAGAAACUGGAGGGCAGCAGUGGACCUGUGCGGACGUCUCCUCACAGCCCACGGCCAGGGCUACGGCAAGAGCGGGCUGCUCACCAGCCACACGACAGAUUCACUGCAGCUCUGGUUUGUCAGGCUGGCACUACUAGUGAAGUUGGGCCUUUUCCAGAAUGCUGAGAUGGAAUUUGAACCCUUCGGAAAUCUUGAUCAGCCAGAUCUYUAUUACGAGUACUACCCGCACGUGUACCCUGGGCGCAGGGGCUCCAUGGUCCCCUUCUCGAUGCGCAUCUUGCACGCGGAGCUUCAGCAGUACCUGGGGAACCCACAGGAGUCGCUGGAUAGACUGCACAAGGUGAAGACUGUCUGCAGCAAGAUCCUGGCCAAUUUGGAGCAAGGCUUAGCAGAAGACGGCGGCAUGAGCAGCGUGACUCAGGAGGGCAGACAAGCCUCUAUCCGGCUGUGGAGGUCACGUCUGGGCCGGGUGAUGUACUCCAUGGCAAACUGUCUGCUCCUGAUGAAGGAUUAUGUGCUGGCCGUGGAGGCGUAUCAUUCGGUUAUCAAGUAUUACCCAGAGCAAGAGCCCCAGCUGCUCAGCGGCAUCGGCCGGAUUUCCCUGCAGAUUGGAGACAUAAAAACAGCUGAAAAGUAUUUUCAAGACGUUGAGAAAGUAACACAGAAAUUAGAUGGACUACAGGGUAAAAUCAUGGUUUUGAUGAACAGCGCGUUCCUUCACCUCGGGCAGAAUAm6ACUUUGCAGAAGCCCACAGGUUCUUCACAGAGAUCUUAAGGAUGGAUCCAAGAAACGCAGUGGCCAACAACAACGCUGCCGUGUGUCUGCUCUACCUGGGCAAGCUCAAGGm6ACUCCCUGCGGCAGCUGGAGGCCAUGGUCCAGCAGGACCCCAGGCACUACCUGCACGAGAGCGUGCUCUUCAACCUGACCACCAUGUACGAGCUGGAGUCCUCACGGAGCAUGCAGAAGAAACm6AGGCCCUGCUGGAGGCUGUCGCCGGCAAGGAGGGGGACAGCUUCAACACACAGUGCCUCAAGCUGGCCUAGCUGCCUCCAACACACUACGUCAGAAGGACCCGGGUCUUUGAAACUGUGUCUUGAAGCUAAUGUAUUAAUGUGACAUGGAGGAACUCAAUAAAACUCCUGCUUCA
Sequence (MODOMICS CODE ENCODING)	GCCUCGGGUUCCUGCAUCGGGCCUGAGCAGAACUAGGCGCGCCGCGGCCCGGCACGCGCAGGCGUACAGAGCUCCCCGGGGGUGCCAGUUCCUCUCCGAUUCCCGGCUUCUGUCACCUUCCUCACGGACCUUGGUCACGGCCGCAGGUGACCCCUUAGCCCAGCUCCAGUGGGCGGGUGGCAGGGUCAUGGAGGACGCUGGCGGCGGCGAGGAG2000000006ACCCCGGCCCCGGAGGCCCCGCACCCCCCUCAGCUCGCGCCUCCGGAGGAGCAGGGGUUGCUCUUCCAGGAGGAAACCAUCGAUCUUGGCGGAGAUGAGUUUGGAUCCGAAGAGAACGAGACCGCAUCGGAAGGCUCGAGUCCUCUCGCGGACAAGCUGAACGA2000000006ACACAUGAUGGAGAGCGUCCUCAUCUCUGACUCCCCCAACAGCGAGGGCGACGCGGGCGACCUGGGCCGAGUGCGGGACGAAGCUGAGCCCGGAGGGGAAGGCGACCCAGGCCCGGAGCCCGCGGGCACCCCGAGUCCCAGCGGCGAGGCCGACGGCGACUGUGCCCCCGAGGACGCGGCACCCAGUAGCGGAGGGGCCCCGAGGCAGGACGCGGCCCGCGAGGUCCCAGGCAGCGAAGCCGCGCGCCCGGAGCAGGAGCCUCCCGUUGCGGAGCCGGUCCCGGUGUGCACCAUCUUCAGCCAGCGCGCGCCCCCAGCCUCCGGGGACGGCUUCGAGCCGCAGAUGGUGAAGUCGCCCAGCUUCGGUGGCGCCAGCGAGGCCUCGGCCAGGACACCGCCCCAGGUCGUGCAGCCCAGCCCCAGCCUCAGCACGUUCUUCGGAGACACGGCCGCCAGCCACUCCUUGGCCUCGG2000000006ACUUCUUCGACUCCU2000000009UUACUACCUCCGCCUUCAUUUCCGUCAGCAAUCCCGGCGCGGGCUCCCCGGCCCCCGCCAGCCCGCCUCCCCUCGCUGUGCCCGGGACCGAGGGGCGCCCCGAACCCGUGGCCAUGCGAGGGCCCCAGGCAGCUGCGCCCCCGGCGUCGCCAGAGCCUUUCGCGCACA2000000009UCCAGGCAGUGUUUGCAGGGAGUGACGACCCCUUUGCCACCGCCCUGAGCAUGAGCGAGAUGG2000000006ACCGGAGGAACGACGCCUGGCUUCCCGGCGAGGCUACGCGUGGAGUCCUGCGGGCCGUGGCCACCCAGCAGCGCGGCGCCGUGUUCGUGGACAAGGAGAACCUCACCAUGCCGGGCCUCAGGUUCGACAACA2000000009UCCAGGGAGAUGCAGUUAAAGACUUGAUGCUUCGCUUUCUGGGUGAAAAAGCUGCAGCAAAGAGACAAGUCCUAAAUGCCGACUCAGUGGAACAAUCUUUUGUUGGAUUGAAACAGCUAAUCAGCUGCAGAAACUGGAGGGCAGCAGUGGACCUGUGCGGACGUCUCCUCACAGCCCACGGCCAGGGCUACGGCAAGAGCGGGCUGCUCACCAGCCACACGACAGAUUCACUGCAGCUCUGGUUUGUCAGGCUGGCACUACUAGUGAAGUUGGGCCUUUUCCAGAAUGCUGAGAUGGAAUUUGAACCCUUCGGAAAUCUUGAUCAGCCAGAUCU2000000009UUAUUACGAGUACUACCCGCACGUGUACCCUGGGCGCAGGGGCUCCAUGGUCCCCUUCUCGAUGCGCAUCUUGCACGCGGAGCUUCAGCAGUACCUGGGGAACCCACAGGAGUCGCUGGAUAGACUGCACAAGGUGAAGACUGUCUGCAGCAAGAUCCUGGCCAAUUUGGAGCAAGGCUUAGCAGAAGACGGCGGCAUGAGCAGCGUGACUCAGGAGGGCAGACAAGCCUCUAUCCGGCUGUGGAGGUCACGUCUGGGCCGGGUGAUGUACUCCAUGGCAAACUGUCUGCUCCUGAUGAAGGAUUAUGUGCUGGCCGUGGAGGCGUAUCAUUCGGUUAUCAAGUAUUACCCAGAGCAAGAGCCCCAGCUGCUCAGCGGCAUCGGCCGGAUUUCCCUGCAGAUUGGAGACAUAAAAACAGCUGAAAAGUAUUUUCAAGACGUUGAGAAAGUAACACAGAAAUUAGAUGGACUACAGGGUAAAAUCAUGGUUUUGAUGAACAGCGCGUUCCUUCACCUCGGGCAGAAUA2000000006ACUUUGCAGAAGCCCACAGGUUCUUCACAGAGAUCUUAAGGAUGGAUCCAAGAAACGCAGUGGCCAACAACAACGCUGCCGUGUGUCUGCUCUACCUGGGCAAGCUCAAGG2000000006ACUCCCUGCGGCAGCUGGAGGCCAUGGUCCAGCAGGACCCCAGGCACUACCUGCACGAGAGCGUGCUCUUCAACCUGACCACCAUGUACGAGCUGGAGUCCUCACGGAGCAUGCAGAAGAAAC2000000006AGGCCCUGCUGGAGGCUGUCGCCGGCAAGGAGGGGGACAGCUUCAACACACAGUGCCUCAAGCUGGCCUAGCUGCCUCCAACACACUACGUCAGAAGGACCCGGGUCUUUGAAACUGUGUCUUGAAGCUAAUGUAUUAAUGUGACAUGGAGGAACUCAAUAAAACUCCUGCUUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	215	379	852	867	1035	1098	1230	1564	2091	2202	2325
Modification Positions	m6A	m6A	m6A	Y	Y	m6A	Y	Y	m6A	m6A	m6A
Genomic Coordinates	2:3387651:+	2:3387815:+	2:3388288:+	2:3388303:+	2:3388471:+	2:3388534:+	2:3388666:+	2:3424623:+	2:3478872:+	2:3479268:+	2:3479391:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	WiQcrNTGZHPT bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 nfCHyrYzE6fB BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB 834aFpha8RvT ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC 834aFpha8RvT ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	834aFpha8RvT ksEP666umrV9