General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000417641
Gene ID:	ENSG00000028116
Gene Name:	VRK2
Sequence (UNICHARACTER ENCODING)	GGCUAUUCACACGCUUCAGUUCACAACUUCCAUCCAGAAUCCUACUUCUCUGAUUGUCCUCAUGGGGAAAGUAUGCUAUUUCCUUCAUCCUACAAGAUGCUUCUCACUGACUCUAUCCAUAUUCUUCUCAUCCUUCAAGAGCCAAGUCAAAUCUCUCUGCUUCCAAUAAGCCUUCCUUGCUACACUCAGAAAUGGAAUGAAUCCCCAAGAUGGCUUAAGGAUGCCCUUCUGUUUUGGAAUGCUUUCUCUUGGUGUAUAUCAAGGUUGGUUCAGUUUACCAGAGAAAAGAUGCCAGUGUCAUAAAGAAGAAUAUUUGAAGCUCUAUAAAUAUGUUGCUUUACGUGGCAAAAAGGACUUUACAGAUCUGAGUACACUGGAUUAUCUGGGUGGGCACAAUGUAAUCACAAGGGGCUUUCUAAGAAGGAAGAAGGAGGGUUCAAGGCAGAAAAACCGGAAGAAGUUAUAACAUUGGCUUUGAAGAUGGAAGAUGGGGACACAAGUCAAGGAAUUCAGGUGGCCUCUAGAAGCCUGAAAAGUCAAAGAAAUGAAUUCUCCCCUAGAGCCUCAAGAAGGAACACAGCCCUGCUGACAGCUUGAUUUUAGGAUUUCUGACCUCCAGACUAAGUGAUGCCACCAAAAAGAAAUGAAAAAUACAAACUUCCUAUUCCAUUUCCAGAAGGCAAGGUUCUGGAUGAUAUGGAAGGCAAUCAGUGGGUACUGGGCAAGAAGAUUGGCUCUGGAGGAUUUGGAUUGAUAUAUUUAGCUUUCCCCACAAAUAAACCAGAGAAAGAUGCAAGACAUGUAGUAAAAGUGGAAUAUCAAGAAAAUGGCCCGUUAUUUUCAGAACUUAAAUUUUAUCAGAGAGUUGCAAAAAAAGACUGUAUCAAAAAGUGGAUAGAACGCAAACAACUUGAUUAUUUAGGAAUUCCUCUGUUUUAUGGAUCUGGUCUGACUGAAUUCAAGGGAAGAAGUUACAGAUUUAUGGUAAUGGAAAGACUAGGAAUAGAUUUACAGAAGAUCUCAGGCCAGAAUGGUACCUPUAAAAAGUCAACUGUCCUGCAAUUAGGUAUCCGAAUGUUGGAUGUACUGGAAUAUAUACAUGAAAAUGAAUAUGUUCAUGGUGAUAUAAAAGCAGCAAAUCUACUUUUGGGUUACAAAAAUCCAGACCAGGUUUAUCUUGCAGAUUAUGGACUUUCCUACAGAUAUUGUCCCAAUGGGAACCACAAACAGUAUCAGGAAAAUCCUAGAAAAGGCCAUAAUGGGACAAUAGAGUUUACCAGCUUGGAUGCCCACAAGGGAGUAGCCUUGUCCAGACGAAGUGACGUUGAGAUCCUCGGCUACUGCAUGCUGCGGUGGUUGUGUGGGAAACUUCCCUGGGAACAGAACCUGAAGGACCCUGUGGCUGUGCAGACUGCUAAAACAAAUCUGUUGGACGAGCUCCCCCAGUCAGUGCUUAAAUGGGCUCCUUCUGGAAGCAGUUGCUGUGAAAUAGCCCAAUUUUUGGUAUGUGCUCAUAGUUUAGCAUAUGAUGAAAAGCCAAACUAUCAAGCCCUCAAGAAAAUUUUGAACCCUCAUGGAAUACCUPUAGGACCACUGGACUUUUCCACAAAAGGACAGAGUAUAAAUGUCCAUACUCCAAЖCAGUCAAAAAGUUGAUUCACAAAAGGCUGCAACAAAGCAAGUCAACAAGGCACACAAUAGGUUAAUCGAAAAAAAAGUCCACAGUGAGAGAAGCGCUGAGUCCUGUGCAACAUGGAAAGUGCAGAAAGAGGAGAAACUGAUUGGAUUGAUGAACAAUGAAGCAGCUCAGUUUAGGUAGAAGCUUAGGCUAUUGAUUUGAACCCACUAUUUUUUCUAAUGAAAGCACAAGGAGAAGACAGAAAUAUCAAGAGUCUCAAGAACCUUUGAAUGAAGUAAЖCAGUUUCCCACAAAAAAUCAGCUAUACACAAUUCCCAAACUCAUUUUAUGAGCCUCAUCAAGAUUUUACCAGUCCAGAUAUAUUCAAGAAGUCAAGAUCUCCAUCUUGGUAUAAAUACACUUCCACAGUCAGCACGGGGAUCACAGЖCUUAGAAAGUUCAACUGGЖCUUUGGCCUACAAUUUCCCAGUUUACUCUUAGUGAAGAGACAAACGCAGAUGUUUAUUAUUAUCGCAUCAUCAUACCUGUCCUUUUGAUGUUAGUAUUUCUUGCUPUAUUUUUUCUCUGAAGAUGAUACCAAAAUUCCUUUUGAUAAUUUUUUAAGUUUCCAGCUCUUCACCGAAAUGUUGUAUUCUUAUUUCAGUGUUUCCUUCCAGЖCAUUUUUAAGGUAAUUGGCUPUAAAAAGAGAACAUAUUUUAЖCAAAGUUUGUGGACACUCUAAAAAAUAAAAUUGCUUUGUACUAGAAA
Sequence (SHORT NAMES ENCODING)	GGCUAUUCACACGCUUCAGUUCACAACUUCCAUCCAGAAUCCUACUUCUCUGAUUGUCCUCAUGGGGAAAGUAUGCUAUUUCCUUCAUCCUACAAGAUGCUUCUCACUGACUCUAUCCAUAUUCUUCUCAUCCUUCAAGAGCCAAGUCAAAUCUCUCUGCUUCCAAUAAGCCUUCCUUGCUACACUCAGAAAUGGAAUGAAUCCCCAAGAUGGCUUAAGGAUGCCCUUCUGUUUUGGAAUGCUUUCUCUUGGUGUAUAUCAAGGUUGGUUCAGUUUACCAGAGAAAAGAUGCCAGUGUCAUAAAGAAGAAUAUUUGAAGCUCUAUAAAUAUGUUGCUUUACGUGGCAAAAAGGACUUUACAGAUCUGAGUACACUGGAUUAUCUGGGUGGGCACAAUGUAAUCACAAGGGGCUUUCUAAGAAGGAAGAAGGAGGGUUCAAGGCAGAAAAACCGGAAGAAGUUAUAACAUUGGCUUUGAAGAUGGAAGAUGGGGACACAAGUCAAGGAAUUCAGGUGGCCUCUAGAAGCCUGAAAAGUCAAAGAAAUGAAUUCUCCCCUAGAGCCUCAAGAAGGAACACAGCCCUGCUGACAGCUUGAUUUUAGGAUUUCUGACCUCCAGACUAAGUGAUGCCACCAAAAAGAAAUGAAAAAUACAAACUUCCUAUUCCAUUUCCAGAAGGCAAGGUUCUGGAUGAUAUGGAAGGCAAUCAGUGGGUACUGGGCAAGAAGAUUGGCUCUGGAGGAUUUGGAUUGAUAUAUUUAGCUUUCCCCACAAAUAAACCAGAGAAAGAUGCAAGACAUGUAGUAAAAGUGGAAUAUCAAGAAAAUGGCCCGUUAUUUUCAGAACUUAAAUUUUAUCAGAGAGUUGCAAAAAAAGACUGUAUCAAAAAGUGGAUAGAACGCAAACAACUUGAUUAUUUAGGAAUUCCUCUGUUUUAUGGAUCUGGUCUGACUGAAUUCAAGGGAAGAAGUUACAGAUUUAUGGUAAUGGAAAGACUAGGAAUAGAUUUACAGAAGAUCUCAGGCCAGAAUGGUACCUYUAAAAAGUCAACUGUCCUGCAAUUAGGUAUCCGAAUGUUGGAUGUACUGGAAUAUAUACAUGAAAAUGAAUAUGUUCAUGGUGAUAUAAAAGCAGCAAAUCUACUUUUGGGUUACAAAAAUCCAGACCAGGUUUAUCUUGCAGAUUAUGGACUUUCCUACAGAUAUUGUCCCAAUGGGAACCACAAACAGUAUCAGGAAAAUCCUAGAAAAGGCCAUAAUGGGACAAUAGAGUUUACCAGCUUGGAUGCCCACAAGGGAGUAGCCUUGUCCAGACGAAGUGACGUUGAGAUCCUCGGCUACUGCAUGCUGCGGUGGUUGUGUGGGAAACUUCCCUGGGAACAGAACCUGAAGGACCCUGUGGCUGUGCAGACUGCUAAAACAAAUCUGUUGGACGAGCUCCCCCAGUCAGUGCUUAAAUGGGCUCCUUCUGGAAGCAGUUGCUGUGAAAUAGCCCAAUUUUUGGUAUGUGCUCAUAGUUUAGCAUAUGAUGAAAAGCCAAACUAUCAAGCCCUCAAGAAAAUUUUGAACCCUCAUGGAAUACCUYUAGGACCACUGGACUUUUCCACAAAAGGACAGAGUAUAAAUGUCCAUACUCCAAm6ACAGUCAAAAAGUUGAUUCACAAAAGGCUGCAACAAAGCAAGUCAACAAGGCACACAAUAGGUUAAUCGAAAAAAAAGUCCACAGUGAGAGAAGCGCUGAGUCCUGUGCAACAUGGAAAGUGCAGAAAGAGGAGAAACUGAUUGGAUUGAUGAACAAUGAAGCAGCUCAGUUUAGGUAGAAGCUUAGGCUAUUGAUUUGAACCCACUAUUUUUUCUAAUGAAAGCACAAGGAGAAGACAGAAAUAUCAAGAGUCUCAAGAACCUUUGAAUGAAGUAAm6ACAGUUUCCCACAAAAAAUCAGCUAUACACAAUUCCCAAACUCAUUUUAUGAGCCUCAUCAAGAUUUUACCAGUCCAGAUAUAUUCAAGAAGUCAAGAUCUCCAUCUUGGUAUAAAUACACUUCCACAGUCAGCACGGGGAUCACAGm6ACUUAGAAAGUUCAACUGGm6ACUUUGGCCUACAAUUUCCCAGUUUACUCUUAGUGAAGAGACAAACGCAGAUGUUUAUUAUUAUCGCAUCAUCAUACCUGUCCUUUUGAUGUUAGUAUUUCUUGCUYUAUUUUUUCUCUGAAGAUGAUACCAAAAUUCCUUUUGAUAAUUUUUUAAGUUUCCAGCUCUUCACCGAAAUGUUGUAUUCUUAUUUCAGUGUUUCCUUCCAGm6ACAUUUUUAAGGUAAUUGGCUYUAAAAAGAGAACAUAUUUUAm6ACAAAGUUUGUGGACACUCUAAAAAAUAAAAUUGCUUUGUACUAGAAA
Sequence (MODOMICS CODE ENCODING)	GGCUAUUCACACGCUUCAGUUCACAACUUCCAUCCAGAAUCCUACUUCUCUGAUUGUCCUCAUGGGGAAAGUAUGCUAUUUCCUUCAUCCUACAAGAUGCUUCUCACUGACUCUAUCCAUAUUCUUCUCAUCCUUCAAGAGCCAAGUCAAAUCUCUCUGCUUCCAAUAAGCCUUCCUUGCUACACUCAGAAAUGGAAUGAAUCCCCAAGAUGGCUUAAGGAUGCCCUUCUGUUUUGGAAUGCUUUCUCUUGGUGUAUAUCAAGGUUGGUUCAGUUUACCAGAGAAAAGAUGCCAGUGUCAUAAAGAAGAAUAUUUGAAGCUCUAUAAAUAUGUUGCUUUACGUGGCAAAAAGGACUUUACAGAUCUGAGUACACUGGAUUAUCUGGGUGGGCACAAUGUAAUCACAAGGGGCUUUCUAAGAAGGAAGAAGGAGGGUUCAAGGCAGAAAAACCGGAAGAAGUUAUAACAUUGGCUUUGAAGAUGGAAGAUGGGGACACAAGUCAAGGAAUUCAGGUGGCCUCUAGAAGCCUGAAAAGUCAAAGAAAUGAAUUCUCCCCUAGAGCCUCAAGAAGGAACACAGCCCUGCUGACAGCUUGAUUUUAGGAUUUCUGACCUCCAGACUAAGUGAUGCCACCAAAAAGAAAUGAAAAAUACAAACUUCCUAUUCCAUUUCCAGAAGGCAAGGUUCUGGAUGAUAUGGAAGGCAAUCAGUGGGUACUGGGCAAGAAGAUUGGCUCUGGAGGAUUUGGAUUGAUAUAUUUAGCUUUCCCCACAAAUAAACCAGAGAAAGAUGCAAGACAUGUAGUAAAAGUGGAAUAUCAAGAAAAUGGCCCGUUAUUUUCAGAACUUAAAUUUUAUCAGAGAGUUGCAAAAAAAGACUGUAUCAAAAAGUGGAUAGAACGCAAACAACUUGAUUAUUUAGGAAUUCCUCUGUUUUAUGGAUCUGGUCUGACUGAAUUCAAGGGAAGAAGUUACAGAUUUAUGGUAAUGGAAAGACUAGGAAUAGAUUUACAGAAGAUCUCAGGCCAGAAUGGUACCU2000000009UUAAAAAGUCAACUGUCCUGCAAUUAGGUAUCCGAAUGUUGGAUGUACUGGAAUAUAUACAUGAAAAUGAAUAUGUUCAUGGUGAUAUAAAAGCAGCAAAUCUACUUUUGGGUUACAAAAAUCCAGACCAGGUUUAUCUUGCAGAUUAUGGACUUUCCUACAGAUAUUGUCCCAAUGGGAACCACAAACAGUAUCAGGAAAAUCCUAGAAAAGGCCAUAAUGGGACAAUAGAGUUUACCAGCUUGGAUGCCCACAAGGGAGUAGCCUUGUCCAGACGAAGUGACGUUGAGAUCCUCGGCUACUGCAUGCUGCGGUGGUUGUGUGGGAAACUUCCCUGGGAACAGAACCUGAAGGACCCUGUGGCUGUGCAGACUGCUAAAACAAAUCUGUUGGACGAGCUCCCCCAGUCAGUGCUUAAAUGGGCUCCUUCUGGAAGCAGUUGCUGUGAAAUAGCCCAAUUUUUGGUAUGUGCUCAUAGUUUAGCAUAUGAUGAAAAGCCAAACUAUCAAGCCCUCAAGAAAAUUUUGAACCCUCAUGGAAUACCU2000000009UUAGGACCACUGGACUUUUCCACAAAAGGACAGAGUAUAAAUGUCCAUACUCCAA2000000006ACAGUCAAAAAGUUGAUUCACAAAAGGCUGCAACAAAGCAAGUCAACAAGGCACACAAUAGGUUAAUCGAAAAAAAAGUCCACAGUGAGAGAAGCGCUGAGUCCUGUGCAACAUGGAAAGUGCAGAAAGAGGAGAAACUGAUUGGAUUGAUGAACAAUGAAGCAGCUCAGUUUAGGUAGAAGCUUAGGCUAUUGAUUUGAACCCACUAUUUUUUCUAAUGAAAGCACAAGGAGAAGACAGAAAUAUCAAGAGUCUCAAGAACCUUUGAAUGAAGUAA2000000006ACAGUUUCCCACAAAAAAUCAGCUAUACACAAUUCCCAAACUCAUUUUAUGAGCCUCAUCAAGAUUUUACCAGUCCAGAUAUAUUCAAGAAGUCAAGAUCUCCAUCUUGGUAUAAAUACACUUCCACAGUCAGCACGGGGAUCACAG2000000006ACUUAGAAAGUUCAACUGG2000000006ACUUUGGCCUACAAUUUCCCAGUUUACUCUUAGUGAAGAGACAAACGCAGAUGUUUAUUAUUAUCGCAUCAUCAUACCUGUCCUUUUGAUGUUAGUAUUUCUUGCU2000000009UUAUUUUUUCUCUGAAGAUGAUACCAAAAUUCCUUUUGAUAAUUUUUUAAGUUUCCAGCUCUUCACCGAAAUGUUGUAUUCUUAUUUCAGUGUUUCCUUCCAG2000000006ACAUUUUUAAGGUAAUUGGCU2000000009UUAAAAAGAGAACAUAUUUUA2000000006ACAAAGUUUGUGGACACUCUAAAAAAUAAAAUUGCUUUGUACUAGAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1040	1585	1640	1917	2064	2083	2189	2292	2313	2334
Modification Positions	Y	Y	m6A	m6A	m6A	m6A	Y	m6A	Y	m6A
Genomic Coordinates	2:58088409:+	2:58139767:+	2:58139822:+	2:58159407:+	2:58159554:+	2:58159573:+	2:58159679:+	2:58159782:+	2:58159803:+	2:58159824:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn nfCHyrYzE6fB BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8