General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000436269
Gene ID:	ENSG00000115464
Gene Name:	USP34
Sequence (UNICHARACTER ENCODING)	GGGAAAAGCAAUAUUCGGCCUCCGCGCCCUGAACUCAAUAUGUGCCUCUUGCCCACAAUGGUGGAAACCAGUAAGUUCAUCCAUCUAUUAUGCCGAGUUGCAAUCAACUGUGAAAAAUUUACUGAAACAUUAGUUAAGCUGAGUGUCCUAGUUGCCUAUGAAGGUUUGCCACUUCAUCUUGCACUGUUCCCCAAACUUUGGACUGAGCUAUGCCAGACUCAGUCUGCUAUGUCAAAAAACUGCAUCAAGCUUUUGUGUGAAGAUCCUGUUUUCGCAGAAUAUAUUAAAUGUAUCCUAAUGGAUGAAAGAACUUUUUUAAACAACAACAUUGUCUACACGUUCAUGACACAUUUCCUUCUAAAGGUUCAAAGUCAAGUGUUUUCUGAAGCAAACUGUGCCAAUUUGAUCAGCACUCUUAUUACAAACUUGAUAAGCCAGUAUCAGAACCUACAGUCUGAUUUCUCCAACCGAGUUGAAAUUUCCAAAGCAAGUGCUUCUPUAAAUGGGGACCUGAGGGCACUCGCUUUGCUCCUGUCAGUACACACUCCCAAACAGUUAAACCCAGCUCUAAUUCCAACUCUGCAAGAGCUUUUAAGCAAAUGCAGGACUUGUCUGCAACAGAGAAACUCACUCCAAGAGCAAGAAGCCAAAGAAAGAAAAACUAAAGAUGAUGAAGGAGCAACUCCCAUUAAAAGGCGGCGUGUUAGCAGUGAUGAGGAGCACACUGUAGACAGCUGCAUCAGUGACAUGAAAACAGAAACCAGGGAGGUCCUGACCCCAACGAGCACUUCUGACAAUGAGACCAGAGЖCUCCUCAAUUAUUGAUCCAGGAЖCUGAGCAAGAUCUUCCUUCCCCUGAAAAUAGUUCUGUUAAAGAAUACCGAAUGGAAGUUCCAUCUUCGUUUUCAGAAGACAUGUCAAAUAUCAGGUCACAGCAUGCAGAAGAЖCAGUCCAACAAUGGUAGAUAUGACGAUUGUAAAGAAUUUAAAGACCUCCACUGUUCCAAGGAUUCUACCCUAGCUGAGGAAGAAUCUGAGUUCCCUUCUACUUCUAUCUCUGCAGUUCUGUCUGACUUAGCUGACUUGAGAAGCUGUGAUGGCCAAGCUUUGCCCUCCCAGGЖCCCUGAGGUUGCUPUAUCUCUCAGUUGUGGCCAUUCCAGAGGЖCUCUPUAGUCAUAUGCAGCAACAUGЖCAUUUUAGAUACCCUGUGUAGGACCAUUGAAUCUACAAUCCAUGUCGUCACAAGGAUAUCUGGCAAAGGAAACCAAGCUGCUUCUUGACAUUAGGUGUAGCAUGUCUACUUUUAAGUCCCUCACCCCCAACCCCCAUGCUGUUUGUAUAAGUUUUGCUUAUUUGUUUUUGUGCUUCAGUUUGUCCAGUGCUCUCUGCUUGAAUGGCAAGAUAGAUUUAUAGGCUUAAUUCUUGGUCAGGCAGAACUCCAGAUGAAAAAAACUUGCAUCUUCAGUAUACUUCCUAAAGGGCAAUCAGAUAAUGGAUAUGUUUUAUGUAAUUAAGAGUUCACUPUAGUGGCUUUCAUUUAAUAUGGCUGUCUGGGAAGAЖCAGGGUUGCCUAGCCCUGUACAAUGUAAUUUAAЖCUUACAGCAUUUUUACUGUGUAUGAUAUGGUGUCCUCUGUGCCAGUUUUGUACCUUAUAGAGGCAGAUUGCCUCCGAUCGCUGUGGUUCUUAUUAUCAAAAUUAAGUUUACUUGUAUACGGAACAACCACAAGAAAUUUGAUUCUGUAAAGAAUCCUCUPUAGCUGUGGCCUGGCAGUAUAUAAAUGGUGCUPUAUUUAЖCAGAAUACCUGUGGAGGAAAUAAAGCACACUUGAUGUA
Sequence (SHORT NAMES ENCODING)	GGGAAAAGCAAUAUUCGGCCUCCGCGCCCUGAACUCAAUAUGUGCCUCUUGCCCACAAUGGUGGAAACCAGUAAGUUCAUCCAUCUAUUAUGCCGAGUUGCAAUCAACUGUGAAAAAUUUACUGAAACAUUAGUUAAGCUGAGUGUCCUAGUUGCCUAUGAAGGUUUGCCACUUCAUCUUGCACUGUUCCCCAAACUUUGGACUGAGCUAUGCCAGACUCAGUCUGCUAUGUCAAAAAACUGCAUCAAGCUUUUGUGUGAAGAUCCUGUUUUCGCAGAAUAUAUUAAAUGUAUCCUAAUGGAUGAAAGAACUUUUUUAAACAACAACAUUGUCUACACGUUCAUGACACAUUUCCUUCUAAAGGUUCAAAGUCAAGUGUUUUCUGAAGCAAACUGUGCCAAUUUGAUCAGCACUCUUAUUACAAACUUGAUAAGCCAGUAUCAGAACCUACAGUCUGAUUUCUCCAACCGAGUUGAAAUUUCCAAAGCAAGUGCUUCUYUAAAUGGGGACCUGAGGGCACUCGCUUUGCUCCUGUCAGUACACACUCCCAAACAGUUAAACCCAGCUCUAAUUCCAACUCUGCAAGAGCUUUUAAGCAAAUGCAGGACUUGUCUGCAACAGAGAAACUCACUCCAAGAGCAAGAAGCCAAAGAAAGAAAAACUAAAGAUGAUGAAGGAGCAACUCCCAUUAAAAGGCGGCGUGUUAGCAGUGAUGAGGAGCACACUGUAGACAGCUGCAUCAGUGACAUGAAAACAGAAACCAGGGAGGUCCUGACCCCAACGAGCACUUCUGACAAUGAGACCAGAGm6ACUCCUCAAUUAUUGAUCCAGGAm6ACUGAGCAAGAUCUUCCUUCCCCUGAAAAUAGUUCUGUUAAAGAAUACCGAAUGGAAGUUCCAUCUUCGUUUUCAGAAGACAUGUCAAAUAUCAGGUCACAGCAUGCAGAAGAm6ACAGUCCAACAAUGGUAGAUAUGACGAUUGUAAAGAAUUUAAAGACCUCCACUGUUCCAAGGAUUCUACCCUAGCUGAGGAAGAAUCUGAGUUCCCUUCUACUUCUAUCUCUGCAGUUCUGUCUGACUUAGCUGACUUGAGAAGCUGUGAUGGCCAAGCUUUGCCCUCCCAGGm6ACCCUGAGGUUGCUYUAUCUCUCAGUUGUGGCCAUUCCAGAGGm6ACUCUYUAGUCAUAUGCAGCAACAUGm6ACAUUUUAGAUACCCUGUGUAGGACCAUUGAAUCUACAAUCCAUGUCGUCACAAGGAUAUCUGGCAAAGGAAACCAAGCUGCUUCUUGACAUUAGGUGUAGCAUGUCUACUUUUAAGUCCCUCACCCCCAACCCCCAUGCUGUUUGUAUAAGUUUUGCUUAUUUGUUUUUGUGCUUCAGUUUGUCCAGUGCUCUCUGCUUGAAUGGCAAGAUAGAUUUAUAGGCUUAAUUCUUGGUCAGGCAGAACUCCAGAUGAAAAAAACUUGCAUCUUCAGUAUACUUCCUAAAGGGCAAUCAGAUAAUGGAUAUGUUUUAUGUAAUUAAGAGUUCACUYUAGUGGCUUUCAUUUAAUAUGGCUGUCUGGGAAGAm6ACAGGGUUGCCUAGCCCUGUACAAUGUAAUUUAAm6ACUUACAGCAUUUUUACUGUGUAUGAUAUGGUGUCCUCUGUGCCAGUUUUGUACCUUAUAGAGGCAGAUUGCCUCCGAUCGCUGUGGUUCUUAUUAUCAAAAUUAAGUUUACUUGUAUACGGAACAACCACAAGAAAUUUGAUUCUGUAAAGAAUCCUCUYUAGCUGUGGCCUGGCAGUAUAUAAAUGGUGCUYUAUUUAm6ACAGAAUACCUGUGGAGGAAAUAAAGCACACUUGAUGUA
Sequence (MODOMICS CODE ENCODING)	GGGAAAAGCAAUAUUCGGCCUCCGCGCCCUGAACUCAAUAUGUGCCUCUUGCCCACAAUGGUGGAAACCAGUAAGUUCAUCCAUCUAUUAUGCCGAGUUGCAAUCAACUGUGAAAAAUUUACUGAAACAUUAGUUAAGCUGAGUGUCCUAGUUGCCUAUGAAGGUUUGCCACUUCAUCUUGCACUGUUCCCCAAACUUUGGACUGAGCUAUGCCAGACUCAGUCUGCUAUGUCAAAAAACUGCAUCAAGCUUUUGUGUGAAGAUCCUGUUUUCGCAGAAUAUAUUAAAUGUAUCCUAAUGGAUGAAAGAACUUUUUUAAACAACAACAUUGUCUACACGUUCAUGACACAUUUCCUUCUAAAGGUUCAAAGUCAAGUGUUUUCUGAAGCAAACUGUGCCAAUUUGAUCAGCACUCUUAUUACAAACUUGAUAAGCCAGUAUCAGAACCUACAGUCUGAUUUCUCCAACCGAGUUGAAAUUUCCAAAGCAAGUGCUUCU2000000009UUAAAUGGGGACCUGAGGGCACUCGCUUUGCUCCUGUCAGUACACACUCCCAAACAGUUAAACCCAGCUCUAAUUCCAACUCUGCAAGAGCUUUUAAGCAAAUGCAGGACUUGUCUGCAACAGAGAAACUCACUCCAAGAGCAAGAAGCCAAAGAAAGAAAAACUAAAGAUGAUGAAGGAGCAACUCCCAUUAAAAGGCGGCGUGUUAGCAGUGAUGAGGAGCACACUGUAGACAGCUGCAUCAGUGACAUGAAAACAGAAACCAGGGAGGUCCUGACCCCAACGAGCACUUCUGACAAUGAGACCAGAG2000000006ACUCCUCAAUUAUUGAUCCAGGA2000000006ACUGAGCAAGAUCUUCCUUCCCCUGAAAAUAGUUCUGUUAAAGAAUACCGAAUGGAAGUUCCAUCUUCGUUUUCAGAAGACAUGUCAAAUAUCAGGUCACAGCAUGCAGAAGA2000000006ACAGUCCAACAAUGGUAGAUAUGACGAUUGUAAAGAAUUUAAAGACCUCCACUGUUCCAAGGAUUCUACCCUAGCUGAGGAAGAAUCUGAGUUCCCUUCUACUUCUAUCUCUGCAGUUCUGUCUGACUUAGCUGACUUGAGAAGCUGUGAUGGCCAAGCUUUGCCCUCCCAGG2000000006ACCCUGAGGUUGCU2000000009UUAUCUCUCAGUUGUGGCCAUUCCAGAGG2000000006ACUCU2000000009UUAGUCAUAUGCAGCAACAUG2000000006ACAUUUUAGAUACCCUGUGUAGGACCAUUGAAUCUACAAUCCAUGUCGUCACAAGGAUAUCUGGCAAAGGAAACCAAGCUGCUUCUUGACAUUAGGUGUAGCAUGUCUACUUUUAAGUCCCUCACCCCCAACCCCCAUGCUGUUUGUAUAAGUUUUGCUUAUUUGUUUUUGUGCUUCAGUUUGUCCAGUGCUCUCUGCUUGAAUGGCAAGAUAGAUUUAUAGGCUUAAUUCUUGGUCAGGCAGAACUCCAGAUGAAAAAAACUUGCAUCUUCAGUAUACUUCCUAAAGGGCAAUCAGAUAAUGGAUAUGUUUUAUGUAAUUAAGAGUUCACU2000000009UUAGUGGCUUUCAUUUAAUAUGGCUGUCUGGGAAGA2000000006ACAGGGUUGCCUAGCCCUGUACAAUGUAAUUUAA2000000006ACUUACAGCAUUUUUACUGUGUAUGAUAUGGUGUCCUCUGUGCCAGUUUUGUACCUUAUAGAGGCAGAUUGCCUCCGAUCGCUGUGGUUCUUAUUAUCAAAAUUAAGUUUACUUGUAUACGGAACAACCACAAGAAAUUUGAUUCUGUAAAGAAUCCUCU2000000009UUAGCUGUGGCCUGGCAGUAUAUAAAUGGUGCU2000000009UUAUUUA2000000006ACAGAAUACCUGUGGAGGAAAUAAAGCACACUUGAUGUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	499	809	832	945	1118	1132	1161	1166	1187	1519	1555	1589	1749	1782	1789
Modification Positions	Y	m6A	m6A	m6A	m6A	Y	m6A	Y	m6A	Y	m6A	m6A	Y	Y	m6A
Genomic Coordinates	2:61190279:-	2:61188568:-	2:61188545:-	2:61188432:-	2:61188259:-	2:61188245:-	2:61188216:-	2:61188211:-	2:61188190:-	2:61187858:-	2:61187822:-	2:61187788:-	2:61187628:-	2:61187595:-	2:61187588:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	3TeAZFYFxgvp 6UuHp6YApVKv aivdrAsbdKEU jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se 93arJtwJmuS9 nfCHyrYzE6fB KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	3TeAZFYFxgvp 4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	6UuHp6YApVKv aivdrAsbdKEU jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ S9vNeQQYrhac JkWoGWVwjNda	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp