General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000409973
Gene ID:	ENSG00000180398
Gene Name:	MCFD2
Sequence (UNICHARACTER ENCODING)	GGGGCGAAGCCGAGGAAGAGCGUUUUGGGGACGGGGGCUGGUGAGGCUCACGUUGGAGGGCUUCGCGUCUGCUUCGGAGACCGUAAGGAGAUGGGGGUCUGACUGUGUUGUCUAGGCUGAUCUCAAACUCCUGGCCUCAAGUGAUCCUCCUGCCUCAGCCUCCCAAAGUGCUGGGAUUACAGAUAUUGAUGACCAUGAGAUCCCUGCUCAGAACCCCCUUCCUGUGUGGCCUGCUCUGGGCCUUUUGUGCCCCAGGCGCCAGGGCUGAGGAGCCUGCAGCCAGCUUCUCCCAACCCGGCAGCAUGGGCCUGGAUAAGAACACAGUGCACGACCAAGAGCAUAUCAUGGAGCAUCUAGAAGGUGUCAUCAACAAACCAGAGGCGGAGAUGUCGCCACAAGAAUUGCAGCUCCAUUACUUCAAAAUGCAUGAUUAUGAUGGCAAUAAUUUGCUUGAUGGCUUAGAACUCUCCACAGCCAUCACUCAUGUCCAPAAGGAGGAAGGGAGUGAЖCAGGCACCACUAAUGAGUGAAGAUGAЖCUGAUUAЖCAUAAUAGAUGGUGUUUUGAGAGAUGAUGACAAGAACAAUGAUGGAUACAUUGACUAUGCUGAAUUUGCAAAAUCACUGCAGUAGAUGUUAUUUGGCCAUCUCCUGGUUAUAUACЖAAUGUGACCCGUGAUAAUGUGAUUGAЖCACUPUAGUAAUGCAAAAUAЖCUCAUUUCCAACUACUGCUGCAGCAUUUUGGUAAAAACCUGUAGCGAUUCGUUACACUGGGGUGAGAAGAGAUAAGAGAAAUGAAAGAGAAGAGAAAUGGGACAUCUAAUAGU
Sequence (SHORT NAMES ENCODING)	GGGGCGAAGCCGAGGAAGAGCGUUUUGGGGACGGGGGCUGGUGAGGCUCACGUUGGAGGGCUUCGCGUCUGCUUCGGAGACCGUAAGGAGAUGGGGGUCUGACUGUGUUGUCUAGGCUGAUCUCAAACUCCUGGCCUCAAGUGAUCCUCCUGCCUCAGCCUCCCAAAGUGCUGGGAUUACAGAUAUUGAUGACCAUGAGAUCCCUGCUCAGAACCCCCUUCCUGUGUGGCCUGCUCUGGGCCUUUUGUGCCCCAGGCGCCAGGGCUGAGGAGCCUGCAGCCAGCUUCUCCCAACCCGGCAGCAUGGGCCUGGAUAAGAACACAGUGCACGACCAAGAGCAUAUCAUGGAGCAUCUAGAAGGUGUCAUCAACAAACCAGAGGCGGAGAUGUCGCCACAAGAAUUGCAGCUCCAUUACUUCAAAAUGCAUGAUUAUGAUGGCAAUAAUUUGCUUGAUGGCUUAGAACUCUCCACAGCCAUCACUCAUGUCCAYAAGGAGGAAGGGAGUGAm6ACAGGCACCACUAAUGAGUGAAGAUGAm6ACUGAUUAm6ACAUAAUAGAUGGUGUUUUGAGAGAUGAUGACAAGAACAAUGAUGGAUACAUUGACUAUGCUGAAUUUGCAAAAUCACUGCAGUAGAUGUUAUUUGGCCAUCUCCUGGUUAUAUACm6AAAUGUGACCCGUGAUAAUGUGAUUGAm6ACACUYUAGUAAUGCAAAAUAm6ACUCAUUUCCAACUACUGCUGCAGCAUUUUGGUAAAAACCUGUAGCGAUUCGUUACACUGGGGUGAGAAGAGAUAAGAGAAAUGAAAGAGAAGAGAAAUGGGACAUCUAAUAGU
Sequence (MODOMICS CODE ENCODING)	GGGGCGAAGCCGAGGAAGAGCGUUUUGGGGACGGGGGCUGGUGAGGCUCACGUUGGAGGGCUUCGCGUCUGCUUCGGAGACCGUAAGGAGAUGGGGGUCUGACUGUGUUGUCUAGGCUGAUCUCAAACUCCUGGCCUCAAGUGAUCCUCCUGCCUCAGCCUCCCAAAGUGCUGGGAUUACAGAUAUUGAUGACCAUGAGAUCCCUGCUCAGAACCCCCUUCCUGUGUGGCCUGCUCUGGGCCUUUUGUGCCCCAGGCGCCAGGGCUGAGGAGCCUGCAGCCAGCUUCUCCCAACCCGGCAGCAUGGGCCUGGAUAAGAACACAGUGCACGACCAAGAGCAUAUCAUGGAGCAUCUAGAAGGUGUCAUCAACAAACCAGAGGCGGAGAUGUCGCCACAAGAAUUGCAGCUCCAUUACUUCAAAAUGCAUGAUUAUGAUGGCAAUAAUUUGCUUGAUGGCUUAGAACUCUCCACAGCCAUCACUCAUGUCCA2000000009UAAGGAGGAAGGGAGUGA2000000006ACAGGCACCACUAAUGAGUGAAGAUGA2000000006ACUGAUUA2000000006ACAUAAUAGAUGGUGUUUUGAGAGAUGAUGACAAGAACAAUGAUGGAUACAUUGACUAUGCUGAAUUUGCAAAAUCACUGCAGUAGAUGUUAUUUGGCCAUCUCCUGGUUAUAUAC2000000006AAAUGUGACCCGUGAUAAUGUGAUUGA2000000006ACACU2000000009UUAGUAAUGCAAAAUA2000000006ACUCAUUUCCAACUACUGCUGCAGCAUUUUGGUAAAAACCUGUAGCGAUUCGUUACACUGGGGUGAGAAGAGAUAAGAGAAAUGAAAGAGAAGAGAAAUGGGACAUCUAAUAGU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	491	509	536	544	660	687	692	708
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	2:46907816:-	2:46905583:-	2:46905556:-	2:46905548:-	2:46905432:-	2:46905405:-	2:46905400:-	2:46905384:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm gZuvgwMuBfgh msuJfBpJvM5H QmcpiJ88DBDn VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8