General Data

RNA Type	rRNA
SOTerm	S0:0001000
Original Source	X52322
Sequence (UNICHARACTER ENCODING)	UACCUGGUUGAUCCUGCCAGUAGUCAUʍUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUGUAAGUAUGAACGAAUUCAGACUGUGAAACUGCGAAUGGCUCAUUAAAUCAGPUAUAGUUUGUUUGAUGGUAACUACUACUCGGAUAACCGUAGUAAUUCUAGʍGCUAAUACGUGCAACAAACCCCGACUUAUGGAAGGGACGCAUUUAUUAGAUAAAAGGUCGACGCGGGCUCUGGCUUGCUCUGAUGAUUCAUGAUAACUCGACGGAUCGCAUGGCCUCUGUGCUGGCGACGCAUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUGGUAACGGGPGACGGAGAAUUAGGGUUCGAUUCCGGAGA##GAGCCUGAGAAACGGCUACCACAUBCAAGGAAGGCAGCAGGCGCGCʍAAUUACCCAAUCCUGACACGGGGAGGUʍGUGABAAUAAAUAACAAUACCGGGCUCUUUCGAGUCUGGUAAUUGGAAUGAGUACAAUCUAAAUCCCUUAACGAGGʍUCCAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGJAAUUCCAGCUCCAAUA#CGUAUAPUUAA#UUGUUGCAGUUʍAAAAGCUCGUAGPUGAACCUUGGGAUGGGUCGGCCGGUCCGCCUUUGGUGUGCAUUGGUCGGCUUGUCCCUUCGGUCGGCGAUACGCUCCUGGUCUUAAUUGGCCGGGUCGUGCCUCCGGCGCUGUUACUUUGAAGAAAPUAGAGUGCUCAAAGCAAGCCUACGCUCUGGAUACAUUʍGCAUGGGAUAACAUCAUAGGAUUUCGAUCCUAUUGUGUUGGCUUCGGGAUCGGAGUAAUGAUUAACAGGGACAGUCGGGGGCAUUCGUAUUUCAUAGUCAGAGGUGAAAUUCUUGGAUUUAUGAAAGACGAACAACUGCGAAAGCAUUPGCCAAGGAUGUUUUCAUUAAUCAAGAʍCGAAAGUUGGGGGCUCGAAGACGAPCAGAUACCGJBCUAGUCUCAACCAUAAACGAUGCCGACCAGGGAUCAGCGGAUGUUGCUUAUAGGACUCCGCUGGCACCUUAUGAGAAAUCAAAGUUUUUGGGUUCCGGG#GGAGUAPGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGGAAACUUACCAGGUCCAGACAUAGUAAGGAJUGACAGACUGAGAGCUCUUUCUUGAUUCUAJGGGUGGJ##UGCAUGGCCGUUCUUAGUUGGUGGAGCGAUUUGUCUGGUUAAUUCCGUUAACGAʍCGAGACCUCAGCCUGCUAACUAGCUACGUGGAGGCAUCCCUUCACGGCCGGCUJCUUAGAGGGACUAUGGCCGUUUAGGCCAAGGAAGUUUGAGGCAAUAACA#GUCUGUGAUGCCCJUAGAUGUUCUGGGCCGCACGCGCGCUACACUGAUGUAUUCAACGAGUUCACACCUUGCCGACAGGCCCGGGUAAUCUUUGAAAUUUCAUCGUGAUGGGGAUAGAUCAUUGCAAUUGUUGGUCUUCAACGAGGAAUUCCUAGUAAGCGCGAGUCAUCAGCUCGCGUUGACUACGUCCCUGCBCUUUGUACACACCGBCCGUCGCUCCUACCGAUUGAAUGAUCCGGUGAAGUGUUCGGAUCGCGGCGACGUGGGUGGUUCGCCGCCCGCGACGUCGCGAGAAGUCCACUAAACCUUAUCAUUUAGAGGAʍGGAGAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUG
Sequence (SHORT NAMES ENCODING)	UACCUGGUUGAUCCUGCCAGUAGUCAUpAmUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUGUAAGUAUGAACGAAUUCAGACUGUGAAACUGCGAAUGGCUCAUUAAAUCAGpYUAUAGUUUGUUUGAUGGUAACUACUACUCGGAUAACCGUAGUAAUUCUAGpAmGCUAAUACGUGCAACAAACCCCGACUUAUGGAAGGGACGCAUUUAUUAGAUAAAAGGUCGACGCGGGCUCUGGCUUGCUCUGAUGAUUCAUGAUAACUCGACGGAUCGCAUGGCCUCUGUGCUGGCGACGCAUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUGGUAACGGGpYGACGGAGAAUUAGGGUUCGAUUCCGGAGApGmpGmGAGCCUGAGAAACGGCUACCACAUpCmCAAGGAAGGCAGCAGGCGCGCpAmAAUUACCCAAUCCUGACACGGGGAGGUpAmGUGApCmAAUAAAUAACAAUACCGGGCUCUUUCGAGUCUGGUAAUUGGAAUGAGUACAAUCUAAAUCCCUUAACGAGGpAmUCCAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGpUmAAUUCCAGCUCCAAUApGmCGUAUApYUUAApGmUUGUUGCAGUUpAmAAAAGCUCGUAGpYUGAACCUUGGGAUGGGUCGGCCGGUCCGCCUUUGGUGUGCAUUGGUCGGCUUGUCCCUUCGGUCGGCGAUACGCUCCUGGUCUUAAUUGGCCGGGUCGUGCCUCCGGCGCUGUUACUUUGAAGAAApYUAGAGUGCUCAAAGCAAGCCUACGCUCUGGAUACAUUpAmGCAUGGGAUAACAUCAUAGGAUUUCGAUCCUAUUGUGUUGGCUUCGGGAUCGGAGUAAUGAUUAACAGGGACAGUCGGGGGCAUUCGUAUUUCAUAGUCAGAGGUGAAAUUCUUGGAUUUAUGAAAGACGAACAACUGCGAAAGCAUUpYGCCAAGGAUGUUUUCAUUAAUCAAGApAmCGAAAGUUGGGGGCUCGAAGACGApYCAGAUACCGpUmpCmCUAGUCUCAACCAUAAACGAUGCCGACCAGGGAUCAGCGGAUGUUGCUUAUAGGACUCCGCUGGCACCUUAUGAGAAAUCAAAGUUUUUGGGUUCCGGGpGmGGAGUApYGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGGAAACUUACCAGGUCCAGACAUAGUAAGGApUmUGACAGACUGAGAGCUCUUUCUUGAUUCUApUmGGGUGGpUmpGmpGmUGCAUGGCCGUUCUUAGUUGGUGGAGCGAUUUGUCUGGUUAAUUCCGUUAACGApAmCGAGACCUCAGCCUGCUAACUAGCUACGUGGAGGCAUCCCUUCACGGCCGGCUpUmCUUAGAGGGACUAUGGCCGUUUAGGCCAAGGAAGUUUGAGGCAAUAACApGmGUCUGUGAUGCCCpUmUAGAUGUUCUGGGCCGCACGCGCGCUACACUGAUGUAUUCAACGAGUUCACACCUUGCCGACAGGCCCGGGUAAUCUUUGAAAUUUCAUCGUGAUGGGGAUAGAUCAUUGCAAUUGUUGGUCUUCAACGAGGAAUUCCUAGUAAGCGCGAGUCAUCAGCUCGCGUUGACUACGUCCCUGCpCmCUUUGUACACACCGpCmCCGUCGCUCCUACCGAUUGAAUGAUCCGGUGAAGUGUUCGGAUCGCGGCGACGUGGGUGGUUCGCCGCCCGCGACGUCGCGAGAAGUCCACUAAACCUUAUCAUUUAGAGGApAmGGAGAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUG
Sequence (MODOMICS CODE ENCODING)	UACCUGGUUGAUCCUGCCAGUAGUCAU2000090551AUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUGUAAGUAUGAACGAAUUCAGACUGUGAAACUGCGAAUGGCUCAUUAAAUCAG2000009551UUAUAGUUUGUUUGAUGGUAACUACUACUCGGAUAACCGUAGUAAUUCUAG2000090551AGCUAAUACGUGCAACAAACCCCGACUUAUGGAAGGGACGCAUUUAUUAGAUAAAAGGUCGACGCGGGCUCUGGCUUGCUCUGAUGAUUCAUGAUAACUCGACGGAUCGCAUGGCCUCUGUGCUGGCGACGCAUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUGGUAACGGG2000009551UGACGGAGAAUUAGGGUUCGAUUCCGGAGA2000090551G2000090551GGAGCCUGAGAAACGGCUACCACAU2000090551CCAAGGAAGGCAGCAGGCGCGC2000090551AAAUUACCCAAUCCUGACACGGGGAGGU2000090551AGUGA2000090551CAAUAAAUAACAAUACCGGGCUCUUUCGAGUCUGGUAAUUGGAAUGAGUACAAUCUAAAUCCCUUAACGAGG2000090551AUCCAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGG2000090551UAAUUCCAGCUCCAAUA2000090551GCGUAUA2000009551UUUAA2000090551GUUGUUGCAGUU2000090551AAAAAGCUCGUAG2000009551UUGAACCUUGGGAUGGGUCGGCCGGUCCGCCUUUGGUGUGCAUUGGUCGGCUUGUCCCUUCGGUCGGCGAUACGCUCCUGGUCUUAAUUGGCCGGGUCGUGCCUCCGGCGCUGUUACUUUGAAGAAA2000009551UUAGAGUGCUCAAAGCAAGCCUACGCUCUGGAUACAUU2000090551AGCAUGGGAUAACAUCAUAGGAUUUCGAUCCUAUUGUGUUGGCUUCGGGAUCGGAGUAAUGAUUAACAGGGACAGUCGGGGGCAUUCGUAUUUCAUAGUCAGAGGUGAAAUUCUUGGAUUUAUGAAAGACGAACAACUGCGAAAGCAUU2000009551UGCCAAGGAUGUUUUCAUUAAUCAAGA2000090551ACGAAAGUUGGGGGCUCGAAGACGA2000009551UCAGAUACCG2000090551U2000090551CCUAGUCUCAACCAUAAACGAUGCCGACCAGGGAUCAGCGGAUGUUGCUUAUAGGACUCCGCUGGCACCUUAUGAGAAAUCAAAGUUUUUGGGUUCCGGG2000090551GGGAGUA2000009551UGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGGAAACUUACCAGGUCCAGACAUAGUAAGGA2000090551UUGACAGACUGAGAGCUCUUUCUUGAUUCUA2000090551UGGGUGG2000090551U2000090551G2000090551GUGCAUGGCCGUUCUUAGUUGGUGGAGCGAUUUGUCUGGUUAAUUCCGUUAACGA2000090551ACGAGACCUCAGCCUGCUAACUAGCUACGUGGAGGCAUCCCUUCACGGCCGGCU2000090551UCUUAGAGGGACUAUGGCCGUUUAGGCCAAGGAAGUUUGAGGCAAUAACA2000090551GGUCUGUGAUGCCC2000090551UUAGAUGUUCUGGGCCGCACGCGCGCUACACUGAUGUAUUCAACGAGUUCACACCUUGCCGACAGGCCCGGGUAAUCUUUGAAAUUUCAUCGUGAUGGGGAUAGAUCAUUGCAAUUGUUGGUCUUCAACGAGGAAUUCCUAGUAAGCGCGAGUCAUCAGCUCGCGUUGACUACGUCCCUGC2000090551CCUUUGUACACACCG2000090551CCCGUCGCUCCUACCGAUUGAAUGAUCCGGUGAAGUGUUCGGAUCGCGGCGACGUGGGUGGUUCGCCGCCCGCGACGUCGCGAGAAGUCCACUAAACCUUAUCAUUUAGAGGA2000090551AGGAGAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	28	110	164	358	388	389	414	436	464	469	541	578	595	602	607	619	632	758	796	947	974	999	1009	1010	1110	1117	1231	1262	1269	1270	1271	1326	1378	1428	1442	1624	1639	1750
Position in the sequence	28	111	162	360	390	391	416	438	466	471	543	580	597	604	609	621	634	761	799	948	975	1000	1010	1011	1111	1118	1232	1263	1270	1271	1272	1327	1381	1431	1445	1626	1641	1754
Modification positions	pAm	pY	pAm	pY	pGm	pGm	pCm	pAm	pAm	pCm	pAm	pUm	pGm	pY	pGm	pAm	pY	pY	pAm	pY	pAm	pY	pUm	pCm	pGm	pY	pUm	pUm	pUm	pGm	pGm	pAm	pUm	pGm	pUm	pCm	pCm	pAm
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS