General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000378034
Gene ID:	ENSG00000136108
Gene Name:	CKAP2
Sequence (UNICHARACTER ENCODING)	GGAGACGGCAGCCGCGCCGUCUGACGGCUUAGCCGCGGUGCAGACUGCGGCGGCGGUGGUCUGAGGAAGUUCUAUCUUGGCGCUAAAGCGGAGACGCAUCCCCCGACCCGAGGCUACGAUGAGCACACCGGCCGUGCCCCAGGACCUGCAGCUGCCCCCGAGUCAGAGGGCGCAGUCCGCAUUCAAAGAGCAAAGAAGACAAAAACUCAAGGAACAUCUGUUGAGAAGAAAAACGCUUUUUGCAUACAAGCAGGAAAAUGAGAUGUUAUCCAGUAGAGAUCAGAGAGUUGUGACAUCUGAGGACCAAGUUCAAGAAGGGACUAAAGUGCUGAAACUUAAAACAAAAAUGGCUGAUAAAGAAAACAUGAAGAGACCUGCAGAGAGCAAAAAUAAUACAGUGGUGGGGAAЖCAUUGUAUUCCUPUAAAACCUUCAAAUGAЖCUAACCAAUUCAACUGUAGUAAUUGACACACAUAAACCUAAGGAUAGUAAUCAAACUCCGCAUUUGUUACUAACUGAAGAUGAUCCCCAAAGUCAACAUAUGACAUUAAGCCAGGCAUUUCACCUUAAAAACAAUAGUAAAAAGAAACAAAUGACUACAGAAAAACAAAAGCAAGAUGCUAACAUGCCCAAGAAACCUGUGCUUGGAUCUUAUCGUGGCCAGAUUGUUCAGUCUAAGAUUAAUUCAUUUAGAAAACCUCUACAAGUCAAAGAUGAGAGUUCUGCAGCAACAAAGAAACUUUCAGCCACUAUACCUAAAGCCACAAAACCUCAGCCUGUAAЖCACCAGCAGUGUAACAGUGAAAAGUAAUAGAUCCUCCAAUAUGЖCUGCCACUACUAAAUUUGUGAGCACUACAUCUCAGAACACACAACUUGUGCGACCUCCUAUUAGAAGUCAUCACAGUAAUACCCGGGЖCACUGUGAAACAAGGCAUCAGUAGAACUUCUGCCAAUGUUACAAUCCGGAAAGGGCCUCAUGAAAAAGAЖCUAUUACAAUCAAAAACAGCUPUAUCUAGUGUCAAAACCAGUUCUUCUCAAGGUAUAAUAAGAAAUAAGЖCUCUAUCAAGAUCCAUAGCAUCUGAAGUUAUAGCCAGGCCUGCUUCAUUGUCUAAUGAUAAACUGAUGGAAAAGUCAGAGCCCGUUGACCAGCGAAGACAUACUGCAGGAAAAGCAAUUGUUGAUAGUAGAUCAGCUCAGCCCAAAGAAACCUCGGAAGAGAGAAAAGCUCGUCUGAGUGAGUGGAAAGCUGGCAAAGGAAGAGUGCUAAAAAGGCCCCCUAAUUCAGUAGUUACUCAGCAUGAGCCUGCAGGACAAAAUGAAAAACCAGUUGGGUCUUUUUGGACUACCAUGGCAGAAGAAGAUGAACAAAGAUUAUUUACUGAAAAAGUAAЖCAACACAUUUUCUGAAUGCCUGAACUUGAUUAAUGAGGGAUGUCCAAAAGAAGAUAUACUGGUCACACUGAAUGACCUGAUUAAAAAUAUUCCAGAUGCCAAAAAGCUUGUUAAGUAUUGGAUAUGUCUUGCACUUAUUGAACCAAUCACAAGUCCUAUUGAAAAUAUUAUUGCAAUCUAUGAGAAAGCCAUUCUGGCAGGGGCUCAGGUAAGAUAAAAAUUUACUGAUCUUUACAAUUACAGUGUAGUAGACAAUUCGGAAUUAAUUUGAAACACAUCACAACAUAACUUGAGAAAAUUUUCUUUGUAUAUGUAGUGGUAAUAAAUGUUUAAAGGCUGCAAGGAUUGCAUUAUAAAAGCUGUUUGUUGGCUUUCUAAGUCUUUUAUUCCUGUAUUGGGAAUAAUCAGAUUUUAGAAAAUGGAUAUAAGCUGAAAUGUAUAUUUAAUGAAACUUUCUGCAUGAAAUGUUUUAGCAUAUUAUUGUAUGCAUUUCCUGGUUGGAAGUUUACUGGGAGACUGAAUGUAAUAUUAAAAUUUGUUUAUUGAAUAUAAAGCAAAAGGGAUUAAAUUCGCUUUUUAAAUGUUA
Sequence (SHORT NAMES ENCODING)	GGAGACGGCAGCCGCGCCGUCUGACGGCUUAGCCGCGGUGCAGACUGCGGCGGCGGUGGUCUGAGGAAGUUCUAUCUUGGCGCUAAAGCGGAGACGCAUCCCCCGACCCGAGGCUACGAUGAGCACACCGGCCGUGCCCCAGGACCUGCAGCUGCCCCCGAGUCAGAGGGCGCAGUCCGCAUUCAAAGAGCAAAGAAGACAAAAACUCAAGGAACAUCUGUUGAGAAGAAAAACGCUUUUUGCAUACAAGCAGGAAAAUGAGAUGUUAUCCAGUAGAGAUCAGAGAGUUGUGACAUCUGAGGACCAAGUUCAAGAAGGGACUAAAGUGCUGAAACUUAAAACAAAAAUGGCUGAUAAAGAAAACAUGAAGAGACCUGCAGAGAGCAAAAAUAAUACAGUGGUGGGGAAm6ACAUUGUAUUCCUYUAAAACCUUCAAAUGAm6ACUAACCAAUUCAACUGUAGUAAUUGACACACAUAAACCUAAGGAUAGUAAUCAAACUCCGCAUUUGUUACUAACUGAAGAUGAUCCCCAAAGUCAACAUAUGACAUUAAGCCAGGCAUUUCACCUUAAAAACAAUAGUAAAAAGAAACAAAUGACUACAGAAAAACAAAAGCAAGAUGCUAACAUGCCCAAGAAACCUGUGCUUGGAUCUUAUCGUGGCCAGAUUGUUCAGUCUAAGAUUAAUUCAUUUAGAAAACCUCUACAAGUCAAAGAUGAGAGUUCUGCAGCAACAAAGAAACUUUCAGCCACUAUACCUAAAGCCACAAAACCUCAGCCUGUAAm6ACACCAGCAGUGUAACAGUGAAAAGUAAUAGAUCCUCCAAUAUGm6ACUGCCACUACUAAAUUUGUGAGCACUACAUCUCAGAACACACAACUUGUGCGACCUCCUAUUAGAAGUCAUCACAGUAAUACCCGGGm6ACACUGUGAAACAAGGCAUCAGUAGAACUUCUGCCAAUGUUACAAUCCGGAAAGGGCCUCAUGAAAAAGAm6ACUAUUACAAUCAAAAACAGCUYUAUCUAGUGUCAAAACCAGUUCUUCUCAAGGUAUAAUAAGAAAUAAGm6ACUCUAUCAAGAUCCAUAGCAUCUGAAGUUAUAGCCAGGCCUGCUUCAUUGUCUAAUGAUAAACUGAUGGAAAAGUCAGAGCCCGUUGACCAGCGAAGACAUACUGCAGGAAAAGCAAUUGUUGAUAGUAGAUCAGCUCAGCCCAAAGAAACCUCGGAAGAGAGAAAAGCUCGUCUGAGUGAGUGGAAAGCUGGCAAAGGAAGAGUGCUAAAAAGGCCCCCUAAUUCAGUAGUUACUCAGCAUGAGCCUGCAGGACAAAAUGAAAAACCAGUUGGGUCUUUUUGGACUACCAUGGCAGAAGAAGAUGAACAAAGAUUAUUUACUGAAAAAGUAAm6ACAACACAUUUUCUGAAUGCCUGAACUUGAUUAAUGAGGGAUGUCCAAAAGAAGAUAUACUGGUCACACUGAAUGACCUGAUUAAAAAUAUUCCAGAUGCCAAAAAGCUUGUUAAGUAUUGGAUAUGUCUUGCACUUAUUGAACCAAUCACAAGUCCUAUUGAAAAUAUUAUUGCAAUCUAUGAGAAAGCCAUUCUGGCAGGGGCUCAGGUAAGAUAAAAAUUUACUGAUCUUUACAAUUACAGUGUAGUAGACAAUUCGGAAUUAAUUUGAAACACAUCACAACAUAACUUGAGAAAAUUUUCUUUGUAUAUGUAGUGGUAAUAAAUGUUUAAAGGCUGCAAGGAUUGCAUUAUAAAAGCUGUUUGUUGGCUUUCUAAGUCUUUUAUUCCUGUAUUGGGAAUAAUCAGAUUUUAGAAAAUGGAUAUAAGCUGAAAUGUAUAUUUAAUGAAACUUUCUGCAUGAAAUGUUUUAGCAUAUUAUUGUAUGCAUUUCCUGGUUGGAAGUUUACUGGGAGACUGAAUGUAAUAUUAAAAUUUGUUUAUUGAAUAUAAAGCAAAAGGGAUUAAAUUCGCUUUUUAAAUGUUA
Sequence (MODOMICS CODE ENCODING)	GGAGACGGCAGCCGCGCCGUCUGACGGCUUAGCCGCGGUGCAGACUGCGGCGGCGGUGGUCUGAGGAAGUUCUAUCUUGGCGCUAAAGCGGAGACGCAUCCCCCGACCCGAGGCUACGAUGAGCACACCGGCCGUGCCCCAGGACCUGCAGCUGCCCCCGAGUCAGAGGGCGCAGUCCGCAUUCAAAGAGCAAAGAAGACAAAAACUCAAGGAACAUCUGUUGAGAAGAAAAACGCUUUUUGCAUACAAGCAGGAAAAUGAGAUGUUAUCCAGUAGAGAUCAGAGAGUUGUGACAUCUGAGGACCAAGUUCAAGAAGGGACUAAAGUGCUGAAACUUAAAACAAAAAUGGCUGAUAAAGAAAACAUGAAGAGACCUGCAGAGAGCAAAAAUAAUACAGUGGUGGGGAA2000000006ACAUUGUAUUCCU2000000009UUAAAACCUUCAAAUGA2000000006ACUAACCAAUUCAACUGUAGUAAUUGACACACAUAAACCUAAGGAUAGUAAUCAAACUCCGCAUUUGUUACUAACUGAAGAUGAUCCCCAAAGUCAACAUAUGACAUUAAGCCAGGCAUUUCACCUUAAAAACAAUAGUAAAAAGAAACAAAUGACUACAGAAAAACAAAAGCAAGAUGCUAACAUGCCCAAGAAACCUGUGCUUGGAUCUUAUCGUGGCCAGAUUGUUCAGUCUAAGAUUAAUUCAUUUAGAAAACCUCUACAAGUCAAAGAUGAGAGUUCUGCAGCAACAAAGAAACUUUCAGCCACUAUACCUAAAGCCACAAAACCUCAGCCUGUAA2000000006ACACCAGCAGUGUAACAGUGAAAAGUAAUAGAUCCUCCAAUAUG2000000006ACUGCCACUACUAAAUUUGUGAGCACUACAUCUCAGAACACACAACUUGUGCGACCUCCUAUUAGAAGUCAUCACAGUAAUACCCGGG2000000006ACACUGUGAAACAAGGCAUCAGUAGAACUUCUGCCAAUGUUACAAUCCGGAAAGGGCCUCAUGAAAAAGA2000000006ACUAUUACAAUCAAAAACAGCU2000000009UUAUCUAGUGUCAAAACCAGUUCUUCUCAAGGUAUAAUAAGAAAUAAG2000000006ACUCUAUCAAGAUCCAUAGCAUCUGAAGUUAUAGCCAGGCCUGCUUCAUUGUCUAAUGAUAAACUGAUGGAAAAGUCAGAGCCCGUUGACCAGCGAAGACAUACUGCAGGAAAAGCAAUUGUUGAUAGUAGAUCAGCUCAGCCCAAAGAAACCUCGGAAGAGAGAAAAGCUCGUCUGAGUGAGUGGAAAGCUGGCAAAGGAAGAGUGCUAAAAAGGCCCCCUAAUUCAGUAGUUACUCAGCAUGAGCCUGCAGGACAAAAUGAAAAACCAGUUGGGUCUUUUUGGACUACCAUGGCAGAAGAAGAUGAACAAAGAUUAUUUACUGAAAAAGUAA2000000006ACAACACAUUUUCUGAAUGCCUGAACUUGAUUAAUGAGGGAUGUCCAAAAGAAGAUAUACUGGUCACACUGAAUGACCUGAUUAAAAAUAUUCCAGAUGCCAAAAAGCUUGUUAAGUAUUGGAUAUGUCUUGCACUUAUUGAACCAAUCACAAGUCCUAUUGAAAAUAUUAUUGCAAUCUAUGAGAAAGCCAUUCUGGCAGGGGCUCAGGUAAGAUAAAAAUUUACUGAUCUUUACAAUUACAGUGUAGUAGACAAUUCGGAAUUAAUUUGAAACACAUCACAACAUAACUUGAGAAAAUUUUCUUUGUAUAUGUAGUGGUAAUAAAUGUUUAAAGGCUGCAAGGAUUGCAUUAUAAAAGCUGUUUGUUGGCUUUCUAAGUCUUUUAUUCCUGUAUUGGGAAUAAUCAGAUUUUAGAAAAUGGAUAUAAGCUGAAAUGUAUAUUUAAUGAAACUUUCUGCAUGAAAUGUUUUAGCAUAUUAUUGUAUGCAUUUCCUGGUUGGAAGUUUACUGGGAGACUGAAUGUAAUAUUAAAAUUUGUUUAUUGAAUAUAAAGCAAAAGGGAUUAAAUUCGCUUUUUAAAUGUUA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	409	422	439	780	824	912	982	1004	1052	1386
Modification Positions	m6A	Y	m6A	m6A	m6A	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	13:52461117:+	13:52461130:+	13:52461147:+	13:52461488:+	13:52461532:+	13:52461620:+	13:52461690:+	13:52461712:+	13:52461760:+	13:52462530:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 oZ9Kp5NX8Hv5 iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	VyCX26p5UBRL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL KENzb7mwdBd9 Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se nfCHyrYzE6fB Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8