RNA Type | snRNA |
---|---|
SOTerm | SO:0000395 |
Original Source | None |
Sequence (UNICHARACTER ENCODING) | ¶AGCCGUGUGAUGAUGACAUAGCGAACUAUJCUPUC#CCUJUPABPAAAGAAUACPCGUGUCAGCGUCACAAUUAGCGGCAUACGCUAGUUUUUGGAAGAGUUCUCAAUUUUGAGGGCUCUG |
Sequence (SHORT NAMES ENCODING) | m2,2,7GpppNAGCCGUGUGAUGAUGACAUAGCGAACUAUpUmCUpYUCpGmCCUpUmUpYApCmpYAAAGAAUACpYCGUGUCAGCGUCACAAUUAGCGGCAUACGCUAGUUUUUGGAAGAGUUCUCAAUUUUGAGGGCUCUG |
Sequence (MODOMICS CODE ENCODING) | 2002279553NAGCCGUGUGAUGAUGACAUAGCGAACUAU2000090551UCU2000009551UUC2000090551GCCU2000090551UU2000009551UA2000090551C2000009551UAAAGAAUAC2000009551UCGUGUCAGCGUCACAAUUAGCGGCAUACGCUAGUUUUUGGAAGAGUUCUCAAUUUUGAGGGCUCUG |
Method Classification | Score |
---|---|
Multiple direct experimental evidence | 1 |
Direct experimental evidence | 2 |
Inferred based on indirect experimental evidence | 3 |
Predicted computationally | 4 |
Evidence not yet annotated (Unknown) | 5 |
Irrelevant | 6 |
Position in the alignment | None | 40 | None | 43 | None | 46 | None | 50 | None | 52 | None | 54 | None | 55 | None | ~ | None |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Position in the sequence | 0 | 30 | 30 | 33 | 33 | 36 | 36 | 40 | 40 | 42 | 42 | 44 | 44 | 45 | 45 | 55 | 55 |
Modification positions | m2,2,7GpppN | pUm | pUm | pY | pY | pGm | pGm | pUm | pUm | pY | pY | pCm | pCm | pY | pY | pY | pY |
Level of Experimental Evidence | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 |
Level of Experimental Reliability | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 | None | 5 |
Source | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS | MODOMICS |