General Data

RNA Type	tRNA
SOTerm	SO:0000261
Original Source	tdbR00000131
Secondary Structure	(((((((..((.(....[..).)).(((((.......)))))....(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GCABCAGUKGUCPAGDGGUAGAAUAGUACCCUGCCA?GGUACAGA???GGGUPCGѢUUCCCGGCUGGUGCACCA
Sequence (SHORT NAMES ENCODING)	GCApCmCAGUpm1GGUCpYAGpDGGUAGAAUAGUACCCUGCCApm5CGGUACAGApm5Cpm5Cpm5CGGGUpYCGpm1AUUCCCGGCUGGUGCACCA
Sequence (MODOMICS CODE ENCODING)	GCA2000090551CCAGU2000001551GGUC2000009551UAG2000008551UGGUAGAAUAGUACCCUGCCA2000005551CGGUACAGA2000005551C2000005551C2000005551CGGGU2000009551UCG2000001551AUUCCCGGCUGGUGCACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GCABCAGUKGUCPAGD--GGU--AGAAUAGUACCCUGCCA?GGUACAGA?--------------------??GGGUPCGѢUUCCCGGCUGGUGCACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	4	9	13	16	38	45B	49	50	55	58
Position in the sequence	4	9	13	16	37	46	47	48	53	56
Modification positions	Cm	m1G	Y	D	m5C	m5C	m5C	m5C	Y	m1A
Level of Experimental Evidence	5	5	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS