General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000370952
Gene ID:	ENSG00000066557
Gene Name:	LRRC40
Sequence (UNICHARACTER ENCODING)	ACGGGUGGGGCUGCAGCUUCUGGACCUAGGACUUUGAACAUGUCGCGCCUGAAGCGGAUAGCGGGGCAGGAUCUCCGCGCUGGUUUCAAAGCAGGUGGAAGAGACUGCGGUACCUCGGUACCCCAAGGGCUGUUGAAGGCAGCGAGGAAGAGCGGCCAGUUAAACCUGUCGGGUAGAAACCUCAGUGAAGUGCCGCAGUGUGUCUGGAGAAUAAAUGUGGAUAUCCCUGAGGAAGCUAAUCAGAAUCUUUCGUUUGGUGCUACUGAAAGAUGGUGGGAGCAGACAGAUUUGACCAAACUAAUAAUAUCAAACAAUAAACUUCAGUCACUUACAGAUGACCUGCGACUCUUGCCUGCACUGACUGUUCUUGAUAUACAUGAUAAUCAGUUGACAUCCCUUCCUUCUGCUAUAAGAGAGCUAGAAAAUCUUCAGAAACUUAAUGUCAGCCAUAAUAAACUGAAAAUACUCCCUGAAGAAAUUACAAACCUAAGAAACCUGAAGUGCCUGUAUCUCCAGCAUAAUGAAUUAACCUGCAUAUCAGAGGGAUPUGAACAACUUUCCAAUUUAGAAGAUUUAGAUCUUUCAAACAAUCAUCUUACAACUGUUCCUGCUAGUUUUUCUUCUCUGUCCAGUCUGGUGCGACUCAAUCUUUCUAGUAAUGAACUGAAGAGUUUGCCAGCAGAAAUAAAUAGAAUGAAAAGGUUGAAGCAUUUGGAUUGUAAUUCAAAUCUCUUGGAAACUAUACCUCCUGAAUUGGCUGGCAUGGAAUCACUAGAAUUGCUPUAUUUGCGGAGGAAUAAAUUACGUUUUCUACCAGAAUUUCCUUCUUGUAGUCUAUUGAAGGAAUUGCACGUAGGUGAAAACCAGAUUGAAAUGUUAGAGGCAGAACAUCUUAAACAUCUGAAUUCAAUUCUUGUGCUAGЖCCUGAGGGAUAACAAGUUAAAAUCUGUUCCAGAUGAAAUUAUACUACUACGGUCCUUGGAAAGGCUUGACCUAAGCAACAAUGAUAUUAGUAGUCUUCCCUAUUCAUUGGGGAACCUUCAUUUGAAAUUUUUGGCAUUAGAAGGAAAUCCUUUGAGAACAAUUCGAAGAGAAAUUAUAAGUAAAGGAACACAAGAAGUCCUAAAAUAUCUACGAAGCAAGAUCAAAGAUGAUGGACCUAGCCAAAGUGAGUCUGCUACUGAGACUGCCAUGACACUACCAAGUGAAUCCAGAGUCAAUAUACAUGCCAUCAUUACAUUAAAAAUAUUAGACUAUAGUGAUAAЖCAAGCAACUUUGAUUCCUGAUGAGGUGUUUGAUGCAGUAAAAAGCAACAUCGUCACUUCUAUUAACUUCAGUAAGAAUCAACUAUGUGAAAUUCCAAAAAGGAUGGUAGAACUGAAGGAAAUGGUUUCUGAUGUCGAUCUCAGUUUUAAUAAACUUUCCUPUAUAUCCUUGGAGUUAUGUGUGCUUCAGAAAUUGACUUUUUUAGAUCUCAGGAACAAUUUUUUAAAUUCUUUGCCAGAAGAAAUGGAAUCACUGGUAAGACUGCAAACGAUCAAUCUUUCCUPUAAUAGGUUUAAAAUGCUACCUGAAGUUCUAUAUCGUAUCUUCACACUUGAAACAAUUCUGAUUAGUAAUAAUCAGGUUGGAUCUGUGGACCCUCAGAAAAUGAAGAUGAUGGAAAAUCUGACCACGUUGGACCUUCAAAAUAAUGACCUCUUACAAAUUCCACCAGAGCUCGGUAAUUGUGUAAACUUAAGAACAUUACUACUGGAUGGAAAUCCAUUCCGAGUUCCUCGAGCAGCCAUAUUAAUGAAAGGAACAGCUGCUAUACUUGAAUAUUUGAGAGЖCCGAAUUCCUACUUAЖCAUGGAGUUGCUPUAUAACCCUUGUCAUGUAUUAUUAACCCUGGUUAAUUCUAAGGAGGAUGUAACAUUUGUUUUAGUAUCAUCUUAAAAGGUGAUUAUUGUAAUUGAUCUUGUAGUUUCCCAGUAUCACCUACCUGUUGGUAUAAUUAGCCUGGGCCAUAUUCACUGCCAGUAAAUAUUUUUACAUUUUUAUUUAAGAUUUUUGUAAGGUGUUGUAUACAUUUGUAAUGGUGAUAACCACAAUGUGUUCAUACAUUUGUUCUAAAUGUUUUGCUUAUGAUUUAUCCUGCUAЖCUUUCAUUUUCUUAUAGCAAGCAGUUUUUUCAAAAAUGAAUUUUUAUUUAAUGUGGUUCAGUAUUAUAAUAACAAAGCAUUUUUGUAGAACUGGUUUUUUUUCUCAUUUAUUUUUGUAUUCCAUACAAUGUGACCAAUUGACUUGAAUAUGACUAGCCAGUUUCUAUGUUUUUGUUAGAUAUAAAAUUAAAUCGAAUUUUGUUGAAUACUGUUCUUUGGCAUUUAAAAAAUAAGACCUUCUUAUCUUGGGCCACAUGUCAAAAGAAAAAGGAAACAAAAAUAUAUUAAAAAUAAGACUUUUCAUUACCCAUGAUAGGACUUUUGUGAUAUGGCUAAUCUCAGUACACAUUUCAACUUAAAACCUUUUUAUUUACAGCACCAUAAUUUUAAAAUUUACUUGCAAUCUUGGUAAGACUAAACUUGCAGUGUUUUUCUAAAAGGGAAUUUGAUAGGUAAACUUGAUUUAAUAAAAAUUAAAUAUCAUUUUUGUUUACACCAAAAUUAUCAGAAGUAGGUUGAUUAGUCAUUAUAЖCACUUACCAUAUGAUUCUAUUAAGAAGUCAAUUCAGUAGCAUGUAUAUCAAUUUAUAUAGAUAGGUAGAUAGCUUUUGGAUGAUUGAGGCAUGCUUAUAUUAUGAAAAAAAUUGCUAAUAAAGAUAAAUACUACAUGUUCAGAAUAAAAGUUACAUUUUUCAAAUAUUGA
Sequence (SHORT NAMES ENCODING)	ACGGGUGGGGCUGCAGCUUCUGGACCUAGGACUUUGAACAUGUCGCGCCUGAAGCGGAUAGCGGGGCAGGAUCUCCGCGCUGGUUUCAAAGCAGGUGGAAGAGACUGCGGUACCUCGGUACCCCAAGGGCUGUUGAAGGCAGCGAGGAAGAGCGGCCAGUUAAACCUGUCGGGUAGAAACCUCAGUGAAGUGCCGCAGUGUGUCUGGAGAAUAAAUGUGGAUAUCCCUGAGGAAGCUAAUCAGAAUCUUUCGUUUGGUGCUACUGAAAGAUGGUGGGAGCAGACAGAUUUGACCAAACUAAUAAUAUCAAACAAUAAACUUCAGUCACUUACAGAUGACCUGCGACUCUUGCCUGCACUGACUGUUCUUGAUAUACAUGAUAAUCAGUUGACAUCCCUUCCUUCUGCUAUAAGAGAGCUAGAAAAUCUUCAGAAACUUAAUGUCAGCCAUAAUAAACUGAAAAUACUCCCUGAAGAAAUUACAAACCUAAGAAACCUGAAGUGCCUGUAUCUCCAGCAUAAUGAAUUAACCUGCAUAUCAGAGGGAUYUGAACAACUUUCCAAUUUAGAAGAUUUAGAUCUUUCAAACAAUCAUCUUACAACUGUUCCUGCUAGUUUUUCUUCUCUGUCCAGUCUGGUGCGACUCAAUCUUUCUAGUAAUGAACUGAAGAGUUUGCCAGCAGAAAUAAAUAGAAUGAAAAGGUUGAAGCAUUUGGAUUGUAAUUCAAAUCUCUUGGAAACUAUACCUCCUGAAUUGGCUGGCAUGGAAUCACUAGAAUUGCUYUAUUUGCGGAGGAAUAAAUUACGUUUUCUACCAGAAUUUCCUUCUUGUAGUCUAUUGAAGGAAUUGCACGUAGGUGAAAACCAGAUUGAAAUGUUAGAGGCAGAACAUCUUAAACAUCUGAAUUCAAUUCUUGUGCUAGm6ACCUGAGGGAUAACAAGUUAAAAUCUGUUCCAGAUGAAAUUAUACUACUACGGUCCUUGGAAAGGCUUGACCUAAGCAACAAUGAUAUUAGUAGUCUUCCCUAUUCAUUGGGGAACCUUCAUUUGAAAUUUUUGGCAUUAGAAGGAAAUCCUUUGAGAACAAUUCGAAGAGAAAUUAUAAGUAAAGGAACACAAGAAGUCCUAAAAUAUCUACGAAGCAAGAUCAAAGAUGAUGGACCUAGCCAAAGUGAGUCUGCUACUGAGACUGCCAUGACACUACCAAGUGAAUCCAGAGUCAAUAUACAUGCCAUCAUUACAUUAAAAAUAUUAGACUAUAGUGAUAAm6ACAAGCAACUUUGAUUCCUGAUGAGGUGUUUGAUGCAGUAAAAAGCAACAUCGUCACUUCUAUUAACUUCAGUAAGAAUCAACUAUGUGAAAUUCCAAAAAGGAUGGUAGAACUGAAGGAAAUGGUUUCUGAUGUCGAUCUCAGUUUUAAUAAACUUUCCUYUAUAUCCUUGGAGUUAUGUGUGCUUCAGAAAUUGACUUUUUUAGAUCUCAGGAACAAUUUUUUAAAUUCUUUGCCAGAAGAAAUGGAAUCACUGGUAAGACUGCAAACGAUCAAUCUUUCCUYUAAUAGGUUUAAAAUGCUACCUGAAGUUCUAUAUCGUAUCUUCACACUUGAAACAAUUCUGAUUAGUAAUAAUCAGGUUGGAUCUGUGGACCCUCAGAAAAUGAAGAUGAUGGAAAAUCUGACCACGUUGGACCUUCAAAAUAAUGACCUCUUACAAAUUCCACCAGAGCUCGGUAAUUGUGUAAACUUAAGAACAUUACUACUGGAUGGAAAUCCAUUCCGAGUUCCUCGAGCAGCCAUAUUAAUGAAAGGAACAGCUGCUAUACUUGAAUAUUUGAGAGm6ACCGAAUUCCUACUUAm6ACAUGGAGUUGCUYUAUAACCCUUGUCAUGUAUUAUUAACCCUGGUUAAUUCUAAGGAGGAUGUAACAUUUGUUUUAGUAUCAUCUUAAAAGGUGAUUAUUGUAAUUGAUCUUGUAGUUUCCCAGUAUCACCUACCUGUUGGUAUAAUUAGCCUGGGCCAUAUUCACUGCCAGUAAAUAUUUUUACAUUUUUAUUUAAGAUUUUUGUAAGGUGUUGUAUACAUUUGUAAUGGUGAUAACCACAAUGUGUUCAUACAUUUGUUCUAAAUGUUUUGCUUAUGAUUUAUCCUGCUAm6ACUUUCAUUUUCUUAUAGCAAGCAGUUUUUUCAAAAAUGAAUUUUUAUUUAAUGUGGUUCAGUAUUAUAAUAACAAAGCAUUUUUGUAGAACUGGUUUUUUUUCUCAUUUAUUUUUGUAUUCCAUACAAUGUGACCAAUUGACUUGAAUAUGACUAGCCAGUUUCUAUGUUUUUGUUAGAUAUAAAAUUAAAUCGAAUUUUGUUGAAUACUGUUCUUUGGCAUUUAAAAAAUAAGACCUUCUUAUCUUGGGCCACAUGUCAAAAGAAAAAGGAAACAAAAAUAUAUUAAAAAUAAGACUUUUCAUUACCCAUGAUAGGACUUUUGUGAUAUGGCUAAUCUCAGUACACAUUUCAACUUAAAACCUUUUUAUUUACAGCACCAUAAUUUUAAAAUUUACUUGCAAUCUUGGUAAGACUAAACUUGCAGUGUUUUUCUAAAAGGGAAUUUGAUAGGUAAACUUGAUUUAAUAAAAAUUAAAUAUCAUUUUUGUUUACACCAAAAUUAUCAGAAGUAGGUUGAUUAGUCAUUAUAm6ACACUUACCAUAUGAUUCUAUUAAGAAGUCAAUUCAGUAGCAUGUAUAUCAAUUUAUAUAGAUAGGUAGAUAGCUUUUGGAUGAUUGAGGCAUGCUUAUAUUAUGAAAAAAAUUGCUAAUAAAGAUAAAUACUACAUGUUCAGAAUAAAAGUUACAUUUUUCAAAUAUUGA
Sequence (MODOMICS CODE ENCODING)	ACGGGUGGGGCUGCAGCUUCUGGACCUAGGACUUUGAACAUGUCGCGCCUGAAGCGGAUAGCGGGGCAGGAUCUCCGCGCUGGUUUCAAAGCAGGUGGAAGAGACUGCGGUACCUCGGUACCCCAAGGGCUGUUGAAGGCAGCGAGGAAGAGCGGCCAGUUAAACCUGUCGGGUAGAAACCUCAGUGAAGUGCCGCAGUGUGUCUGGAGAAUAAAUGUGGAUAUCCCUGAGGAAGCUAAUCAGAAUCUUUCGUUUGGUGCUACUGAAAGAUGGUGGGAGCAGACAGAUUUGACCAAACUAAUAAUAUCAAACAAUAAACUUCAGUCACUUACAGAUGACCUGCGACUCUUGCCUGCACUGACUGUUCUUGAUAUACAUGAUAAUCAGUUGACAUCCCUUCCUUCUGCUAUAAGAGAGCUAGAAAAUCUUCAGAAACUUAAUGUCAGCCAUAAUAAACUGAAAAUACUCCCUGAAGAAAUUACAAACCUAAGAAACCUGAAGUGCCUGUAUCUCCAGCAUAAUGAAUUAACCUGCAUAUCAGAGGGAU2000000009UUGAACAACUUUCCAAUUUAGAAGAUUUAGAUCUUUCAAACAAUCAUCUUACAACUGUUCCUGCUAGUUUUUCUUCUCUGUCCAGUCUGGUGCGACUCAAUCUUUCUAGUAAUGAACUGAAGAGUUUGCCAGCAGAAAUAAAUAGAAUGAAAAGGUUGAAGCAUUUGGAUUGUAAUUCAAAUCUCUUGGAAACUAUACCUCCUGAAUUGGCUGGCAUGGAAUCACUAGAAUUGCU2000000009UUAUUUGCGGAGGAAUAAAUUACGUUUUCUACCAGAAUUUCCUUCUUGUAGUCUAUUGAAGGAAUUGCACGUAGGUGAAAACCAGAUUGAAAUGUUAGAGGCAGAACAUCUUAAACAUCUGAAUUCAAUUCUUGUGCUAG2000000006ACCUGAGGGAUAACAAGUUAAAAUCUGUUCCAGAUGAAAUUAUACUACUACGGUCCUUGGAAAGGCUUGACCUAAGCAACAAUGAUAUUAGUAGUCUUCCCUAUUCAUUGGGGAACCUUCAUUUGAAAUUUUUGGCAUUAGAAGGAAAUCCUUUGAGAACAAUUCGAAGAGAAAUUAUAAGUAAAGGAACACAAGAAGUCCUAAAAUAUCUACGAAGCAAGAUCAAAGAUGAUGGACCUAGCCAAAGUGAGUCUGCUACUGAGACUGCCAUGACACUACCAAGUGAAUCCAGAGUCAAUAUACAUGCCAUCAUUACAUUAAAAAUAUUAGACUAUAGUGAUAA2000000006ACAAGCAACUUUGAUUCCUGAUGAGGUGUUUGAUGCAGUAAAAAGCAACAUCGUCACUUCUAUUAACUUCAGUAAGAAUCAACUAUGUGAAAUUCCAAAAAGGAUGGUAGAACUGAAGGAAAUGGUUUCUGAUGUCGAUCUCAGUUUUAAUAAACUUUCCU2000000009UUAUAUCCUUGGAGUUAUGUGUGCUUCAGAAAUUGACUUUUUUAGAUCUCAGGAACAAUUUUUUAAAUUCUUUGCCAGAAGAAAUGGAAUCACUGGUAAGACUGCAAACGAUCAAUCUUUCCU2000000009UUAAUAGGUUUAAAAUGCUACCUGAAGUUCUAUAUCGUAUCUUCACACUUGAAACAAUUCUGAUUAGUAAUAAUCAGGUUGGAUCUGUGGACCCUCAGAAAAUGAAGAUGAUGGAAAAUCUGACCACGUUGGACCUUCAAAAUAAUGACCUCUUACAAAUUCCACCAGAGCUCGGUAAUUGUGUAAACUUAAGAACAUUACUACUGGAUGGAAAUCCAUUCCGAGUUCCUCGAGCAGCCAUAUUAAUGAAAGGAACAGCUGCUAUACUUGAAUAUUUGAGAG2000000006ACCGAAUUCCUACUUA2000000006ACAUGGAGUUGCU2000000009UUAUAACCCUUGUCAUGUAUUAUUAACCCUGGUUAAUUCUAAGGAGGAUGUAACAUUUGUUUUAGUAUCAUCUUAAAAGGUGAUUAUUGUAAUUGAUCUUGUAGUUUCCCAGUAUCACCUACCUGUUGGUAUAAUUAGCCUGGGCCAUAUUCACUGCCAGUAAAUAUUUUUACAUUUUUAUUUAAGAUUUUUGUAAGGUGUUGUAUACAUUUGUAAUGGUGAUAACCACAAUGUGUUCAUACAUUUGUUCUAAAUGUUUUGCUUAUGAUUUAUCCUGCUA2000000006ACUUUCAUUUUCUUAUAGCAAGCAGUUUUUUCAAAAAUGAAUUUUUAUUUAAUGUGGUUCAGUAUUAUAAUAACAAAGCAUUUUUGUAGAACUGGUUUUUUUUCUCAUUUAUUUUUGUAUUCCAUACAAUGUGACCAAUUGACUUGAAUAUGACUAGCCAGUUUCUAUGUUUUUGUUAGAUAUAAAAUUAAAUCGAAUUUUGUUGAAUACUGUUCUUUGGCAUUUAAAAAAUAAGACCUUCUUAUCUUGGGCCACAUGUCAAAAGAAAAAGGAAACAAAAAUAUAUUAAAAAUAAGACUUUUCAUUACCCAUGAUAGGACUUUUGUGAUAUGGCUAAUCUCAGUACACAUUUCAACUUAAAACCUUUUUAUUUACAGCACCAUAAUUUUAAAAUUUACUUGCAAUCUUGGUAAGACUAAACUUGCAGUGUUUUUCUAAAAGGGAAUUUGAUAGGUAAACUUGAUUUAAUAAAAAUUAAAUAUCAUUUUUGUUUACACCAAAAUUAUCAGAAGUAGGUUGAUUAGUCAUUAUA2000000006ACACUUACCAUAUGAUUCUAUUAAGAAGUCAAUUCAGUAGCAUGUAUAUCAAUUUAUAUAGAUAGGUAGAUAGCUUUUGGAUGAUUGAGGCAUGCUUAUAUUAUGAAAAAAAUUGCUAAUAAAGAUAAAUACUACAUGUUCAGAAUAAAAGUUACAUUUUUCAAAUAUUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	548	783	923	1266	1427	1550	1832	1848	1861	2141	2673
Modification Positions	Y	Y	m6A	m6A	Y	Y	m6A	m6A	Y	m6A	m6A
Genomic Coordinates	1:70184813:-	1:70178911:-	1:70175903:-	1:70155790:-	1:70152484:-	1:70151134:-	1:70145816:-	1:70145800:-	1:70145787:-	1:70145507:-	1:70144975:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 Yfn77uLS5tv8	4HMi5ykupT9V jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8