General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000368009
Gene ID:	ENSG00000158793
Gene Name:	NIT1
Sequence (UNICHARACTER ENCODING)	ACUCGCUGCGGCGCUUCUGGCUCCAGACCGCCCUCCGGAUCGGACCCUGCGAAUGGUUUUGGCUAUAUCUUCAUGCUGGGCUUCAUCACCAGGCCUCCUCACAGAUUCCUGUCCCUUCUGUGUCCUGGACUCCGGAUACCUCAACUCUCAGUACUUUGUGCUCAGCCCAGGCCCAGAGCCAUGGCUAUCUCCUCUUCCUCCUGCGAACUGCCCCUGGUGGCUGUGUGCCAGGUAACAUCGACGCCAGACAAGCAACAGAACUPUAAAACAUGUGCUGAGCUGGUUCGAGAGGCUGCCAGACUGGGUGCCUGCCUGGCUUUCCUGCCUGAGGCAUUUGACUUCAUUGCACGGGACCCUGCAGAGACGCUACACCUGUCUGAACCACUGGGUGGGAAACUUUUGGAAGAAUACACCCAGCUUGCCAGGGAAUGUGGACUCUGGCUGUCCUUGGGUGGUUUCCAUGAGCGUGGCCAAGACUGGGAGCAGACUCAGAAAAUCUACAAUUGUCACGUGCUGCUGAЖCAGCAAAGGGGCAGUAGUGGCCACUUACAGGAAGACACAUCUGUGUGACGUAGAGAUUCCAGGGCAGGGGCCUAUGUGUGAAAGCAACUCUACCAUGCCUGGGCCCAGUCUUGAGUCACCUGUCAGCACACCAGCAGGCAAGAUUGGUCUAGCUGUCUGCUAUGACAUGCGGUUCCCUGAACUCUCUCUGGCAUUGGCUCAAGCUGGAGCЖGAGAUACUUACCUAUCCUUCAGCUUUUGGAUCCAUUACAGGCCCAGCCCACUGGGAGGUGUUGCUGCGGGCCCGUGCUAUCGAAACCCAGUGCUAUGUAGUGGCAGCAGCACAGUGUGGACGCCACCAUGAGAAGAGAGCAAGUUAUGGCCACAGCAUGGUGGUAGЖCCCCUGGGGAACAGUGGUGGCCCGCUGCUCUGAGGGGCCAGGCCUCUGCCUUGCCCGAAUAGACCUCAЖCUAUCUGCGACAGUUGCGCCGACACCUGCCUGUGUUCCAGCACCGCAGGCCUGACCUCUAUGGCAAUCUGGGUCACCCACUGUCUUAAGЖCUUGACUUCUGUGAGUUUAGЖCCUGCCCCUCCCACCCCCACCCUGCCACUAUGAGCUAGUGCUCAUGUGACUUGGAGGCAGGAUCCAGGCACAGCUCCCCUCACUUGGAGAACCUUGACUCUCUUGAUGGAACACAGAUGGGCUGCUUGGGAAAGAAACUUUCACCUGAGCUUCACCUGAGGUCAGACUGCAGUUUCAGAAAGGUGGAAUUUUAUAUAGUCAUUGUUUAUUUCAUGGAAACUGAAGUUCUGCUGAGGGCUGAGCAGCACUGGCAUUGAAAAAUAUAAUAAUCAUAAAGUCUGUGUCUGGACAUCGCCUUUGGGAACUAGAAGGGGAGUUGGUAUUGUACCAGCUGGACUAAGCUCCAGUUCUAGACCUCCUGGCUCAUUCAACAUGCCUCCCUACCUAAAUAAAAGUGCAACACUCA
Sequence (SHORT NAMES ENCODING)	ACUCGCUGCGGCGCUUCUGGCUCCAGACCGCCCUCCGGAUCGGACCCUGCGAAUGGUUUUGGCUAUAUCUUCAUGCUGGGCUUCAUCACCAGGCCUCCUCACAGAUUCCUGUCCCUUCUGUGUCCUGGACUCCGGAUACCUCAACUCUCAGUACUUUGUGCUCAGCCCAGGCCCAGAGCCAUGGCUAUCUCCUCUUCCUCCUGCGAACUGCCCCUGGUGGCUGUGUGCCAGGUAACAUCGACGCCAGACAAGCAACAGAACUYUAAAACAUGUGCUGAGCUGGUUCGAGAGGCUGCCAGACUGGGUGCCUGCCUGGCUUUCCUGCCUGAGGCAUUUGACUUCAUUGCACGGGACCCUGCAGAGACGCUACACCUGUCUGAACCACUGGGUGGGAAACUUUUGGAAGAAUACACCCAGCUUGCCAGGGAAUGUGGACUCUGGCUGUCCUUGGGUGGUUUCCAUGAGCGUGGCCAAGACUGGGAGCAGACUCAGAAAAUCUACAAUUGUCACGUGCUGCUGAm6ACAGCAAAGGGGCAGUAGUGGCCACUUACAGGAAGACACAUCUGUGUGACGUAGAGAUUCCAGGGCAGGGGCCUAUGUGUGAAAGCAACUCUACCAUGCCUGGGCCCAGUCUUGAGUCACCUGUCAGCACACCAGCAGGCAAGAUUGGUCUAGCUGUCUGCUAUGACAUGCGGUUCCCUGAACUCUCUCUGGCAUUGGCUCAAGCUGGAGCm6AGAGAUACUUACCUAUCCUUCAGCUUUUGGAUCCAUUACAGGCCCAGCCCACUGGGAGGUGUUGCUGCGGGCCCGUGCUAUCGAAACCCAGUGCUAUGUAGUGGCAGCAGCACAGUGUGGACGCCACCAUGAGAAGAGAGCAAGUUAUGGCCACAGCAUGGUGGUAGm6ACCCCUGGGGAACAGUGGUGGCCCGCUGCUCUGAGGGGCCAGGCCUCUGCCUUGCCCGAAUAGACCUCAm6ACUAUCUGCGACAGUUGCGCCGACACCUGCCUGUGUUCCAGCACCGCAGGCCUGACCUCUAUGGCAAUCUGGGUCACCCACUGUCUUAAGm6ACUUGACUUCUGUGAGUUUAGm6ACCUGCCCCUCCCACCCCCACCCUGCCACUAUGAGCUAGUGCUCAUGUGACUUGGAGGCAGGAUCCAGGCACAGCUCCCCUCACUUGGAGAACCUUGACUCUCUUGAUGGAACACAGAUGGGCUGCUUGGGAAAGAAACUUUCACCUGAGCUUCACCUGAGGUCAGACUGCAGUUUCAGAAAGGUGGAAUUUUAUAUAGUCAUUGUUUAUUUCAUGGAAACUGAAGUUCUGCUGAGGGCUGAGCAGCACUGGCAUUGAAAAAUAUAAUAAUCAUAAAGUCUGUGUCUGGACAUCGCCUUUGGGAACUAGAAGGGGAGUUGGUAUUGUACCAGCUGGACUAAGCUCCAGUUCUAGACCUCCUGGCUCAUUCAACAUGCCUCCCUACCUAAAUAAAAGUGCAACACUCA
Sequence (MODOMICS CODE ENCODING)	ACUCGCUGCGGCGCUUCUGGCUCCAGACCGCCCUCCGGAUCGGACCCUGCGAAUGGUUUUGGCUAUAUCUUCAUGCUGGGCUUCAUCACCAGGCCUCCUCACAGAUUCCUGUCCCUUCUGUGUCCUGGACUCCGGAUACCUCAACUCUCAGUACUUUGUGCUCAGCCCAGGCCCAGAGCCAUGGCUAUCUCCUCUUCCUCCUGCGAACUGCCCCUGGUGGCUGUGUGCCAGGUAACAUCGACGCCAGACAAGCAACAGAACU2000000009UUAAAACAUGUGCUGAGCUGGUUCGAGAGGCUGCCAGACUGGGUGCCUGCCUGGCUUUCCUGCCUGAGGCAUUUGACUUCAUUGCACGGGACCCUGCAGAGACGCUACACCUGUCUGAACCACUGGGUGGGAAACUUUUGGAAGAAUACACCCAGCUUGCCAGGGAAUGUGGACUCUGGCUGUCCUUGGGUGGUUUCCAUGAGCGUGGCCAAGACUGGGAGCAGACUCAGAAAAUCUACAAUUGUCACGUGCUGCUGA2000000006ACAGCAAAGGGGCAGUAGUGGCCACUUACAGGAAGACACAUCUGUGUGACGUAGAGAUUCCAGGGCAGGGGCCUAUGUGUGAAAGCAACUCUACCAUGCCUGGGCCCAGUCUUGAGUCACCUGUCAGCACACCAGCAGGCAAGAUUGGUCUAGCUGUCUGCUAUGACAUGCGGUUCCCUGAACUCUCUCUGGCAUUGGCUCAAGCUGGAGC2000000006AGAGAUACUUACCUAUCCUUCAGCUUUUGGAUCCAUUACAGGCCCAGCCCACUGGGAGGUGUUGCUGCGGGCCCGUGCUAUCGAAACCCAGUGCUAUGUAGUGGCAGCAGCACAGUGUGGACGCCACCAUGAGAAGAGAGCAAGUUAUGGCCACAGCAUGGUGGUAG2000000006ACCCCUGGGGAACAGUGGUGGCCCGCUGCUCUGAGGGGCCAGGCCUCUGCCUUGCCCGAAUAGACCUCA2000000006ACUAUCUGCGACAGUUGCGCCGACACCUGCCUGUGUUCCAGCACCGCAGGCCUGACCUCUAUGGCAAUCUGGGUCACCCACUGUCUUAAG2000000006ACUUGACUUCUGUGAGUUUAG2000000006ACCUGCCCCUCCCACCCCCACCCUGCCACUAUGAGCUAGUGCUCAUGUGACUUGGAGGCAGGAUCCAGGCACAGCUCCCCUCACUUGGAGAACCUUGACUCUCUUGAUGGAACACAGAUGGGCUGCUUGGGAAAGAAACUUUCACCUGAGCUUCACCUGAGGUCAGACUGCAGUUUCAGAAAGGUGGAAUUUUAUAUAGUCAUUGUUUAUUUCAUGGAAACUGAAGUUCUGCUGAGGGCUGAGCAGCACUGGCAUUGAAAAAUAUAAUAAUCAUAAAGUCUGUGUCUGGACAUCGCCUUUGGGAACUAGAAGGGGAGUUGGUAUUGUACCAGCUGGACUAAGCUCCAGUUCUAGACCUCCUGGCUCAUUCAACAUGCCUCCCUACCUAAAUAAAAGUGCAACACUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	263	521	732	899	968	1058	1079
Modification Positions	Y	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	1:161119226:+	1:161119604:+	1:161120175:+	1:161120608:+	1:161120677:+	1:161120767:+	1:161120788:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Yfn77uLS5tv8	dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL nfCHyrYzE6fB BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML dA7YoLwHrzgR ksEP666umrV9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8