General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000479408
Gene ID:	ENSG00000178104
Gene Name:	PDE4DIP
Sequence (UNICHARACTER ENCODING)	AGAACCCAGGCGGGGCGGGGCCGGGAAAGGUGAGGCUGCUGGCGGGAAGCGGGGGCGGCGCGCAGCGGUACCUAGCGGCGCUGCCCCGCUGGCAGCCGGAGGACGUGGCACUGUCCGAGAAUGCAGGGAGGGGAUUCGUCUUUCUCCUCCCCGCGAGGAGGAGCCUCGACAUCCUGCAGAGGCGGGAGGAUCCUUGAGGGCACUGGUGCGACUUUCAGCCCAUGACUGAAGAGUUGCUGAAACAACAAAAGCUGAAUUCACAUGAGACCACUAUAACUCAGCAGUCUGUAUCUGAUUCCCACUUGGCAGAACUCCAGGAAAAAAUCCAGCAAACAGAGGCCACCAACAAGAUUCUUCAAGAGAAACUUAAUGAAAUGAGCUAUGAACUAAAGUGUGCUCAGGAGUCGUCUCAAAAGCAAGAUGGUACAAUUCAGAACCUCAAGGAAACUCUGAAAAGCAGGGAACGUGAGACUGAGGAGUUGUACCAGGUAAUUGAAGGUCAAAAUGACACAAUGGCAAAGCUUCGAGAAAUGCUGCACCAAAGCCAGCUUGGACAACUUCACAGCUCAGAGGGUACUUCUCCAGCUCAGCAACAGGUAGCUCUGCUUGAUCUUCAGAGUGCUPUAUUCUGCAGCCAACUUGAAAUACAGAAGCUCCAGAGGGUGGUACGACAGAAAGAGCGCCAACUGGCUGAUGCCAAACAAUGUGUGCAAUUUGUAGAGGCUGCAGCACACGAGAGUGAACAGCAGAAAGAGGCUUCUUGGAAACAUAACCAGGAAUUGCGAAAAGCCUUGCAGCAGCUACAAGAAGAAUUGCAGAAUAAGAGCCAACAGCUUCGUGCCUGGGAGGCUGAAAAAUACAAUGAGAUUCGAACCCAGGAACAAAACAUCCAGCACCUAAACCAUAGUCUGAGUCACAAGGAGCAGUUGCUUCAGGAAUUUCGGGAGCUCCUACAGUAUCGAGAUAACUCAGACAAAACCCUUGAAGCAAAUGAAAUGUUGCUUGAGAAACUUCGCCAGCGAAUACAUGAUAAAGCUGUUGCUCUGGAGCGGGCUAUAGAUGAAAAAUUCUCUGCUCUAGAAGAGAAAGAAAAAGAACUGCGCCAGCUUCGUCUUGCUGUGAGAGAGCGAGAUCAUGACUUAGAGAGACUGCGCGAUGUCCUCUCCUCCAAUGAAGCUACUAUGCAAAGUAUGGAGAGUCUCCUGAGGGCCAAAGGCCUGGAAGUGGAACAGUUAUCUACUACCUGUCAAAACCUCCAGUGGCUGAAAGAAGAAAUGGAAACCAAAUUUAGCCGUUGGCAGAAGGAACAAGAGAGUAUCAUUCAGCAGUUACAGACGUCUCUUCAUGAUAGGAACAAAGAAGUGGAGGAUCUUAGUGCAACACUGCUCUGCAAACUUGGACCAGGGCAGAGUGAGAUAGCAGAGGAGCUGUGCCAGCGUCUACAGCGAAAGGAAAGGAUGCUGCAGGACCUUCUAAGUGAUCGAAAUAAACAAGUGCUGGAACAUGAAAUGGAGAUUCAAGGCCUGCUUCAGUCUGUGAGCACCAGGGAGCAGGAAAGCCAAGCUGCUGCAGAGAAGUUGGUGCAAGCCUUAAUGGAAAGAAAUUCAGAAUUACAGGCCCUGCGCCAAUAUUUAGGAGGGAGAGACUCCCUGAUGUCCCAAGCACCCAUCUCUAACCAACAAGCUGAAGUUACCCCCACUGGCCGUCUUGGAAAACAGACUGAUCAAGGUUCAAUGCAGAUACCUUCCAGAGAUGAUAGCACUUCAUUGACUGCCAAAGAGGAUGUCAGCAUACCCAGAUCCACAUUAGGAGACUUGGACACAGUUGCAGGGCUGGAAAAAGAACUGAGUAAUGCCAAAGAGGAACUUGAACUCAUGGCUAAAAAAGAAAGAGAAAGUCAGAUGGAACUUUCUGCUCUACAGUCCAUGAUGGCUGUGCAGGAAGAAGAGCUGCAGGUGCAGGCUGCUGAUAUGGAGUCUCUGACCAGGAACAUACAGAUUAAAGAAGAUCUCAUAAAGGACCUGCAAAUGCAACUGGUUGAUCCUGAAGACAUACCAGCUAUGGAACGCCUGACCCAGGAAGUCUUACUUCUUCGGGAAAAAGUUGCUUCAGUAGAAUCCCAGGGUCAAGAAAUUUCAGGAAACCGAAGACAACAGUUGCUGCUGAUGCUAGAAGGACUAGUAGAUGAACGGAGUCGGCUCAAUGAGGCCUUACAAGCAGAGAGACAGCUCUAUAGCAGUCUGGUGAAGUUCCAUGCCCAPCCAGAGAGCUCUGAGAGAGЖCCGAACUCUGCAGGUGGAACUGGAAGGGGCUCAGGUGUUACGCAGUCGGCUAGAAGAAGUUCUUGGAAGAAGCUUGGAGCGCUUAAЖCAGGCUGGAGЖCCCUGGCCGCCAUUGGAGGUGGGGAЖCUGGAAAGUGUGCGAAUUCAUCACAAGCAUGCCUACUGAGCACUGGCGGGUCAGЖCUGCAGCCCAGGAUGGAAAACCUUGUUUGCACUAACCAGAAAGAUCCUUGUCUGAUUUUGGCAGAAUUAAACGGUGЖCUUACUAAUGAUAGAЖCUGGUACAAGUAGCAUCAACUACAAAGUGAAACUCACUPUAGCCUACAUGGAUCUCACUGUACAUACAUAUCAAUCCCUAAAUUGAAUGGUGGAGGUUGCAAAGUGUAUUUGCACAUUUUAAAUCAUUCUGUUUUAGUUUUUCCACUUUUAUUCAUUCUUAUCCCUAGCCCCUUCUCGUUCCCUCAPCCCUUC
Sequence (SHORT NAMES ENCODING)	AGAACCCAGGCGGGGCGGGGCCGGGAAAGGUGAGGCUGCUGGCGGGAAGCGGGGGCGGCGCGCAGCGGUACCUAGCGGCGCUGCCCCGCUGGCAGCCGGAGGACGUGGCACUGUCCGAGAAUGCAGGGAGGGGAUUCGUCUUUCUCCUCCCCGCGAGGAGGAGCCUCGACAUCCUGCAGAGGCGGGAGGAUCCUUGAGGGCACUGGUGCGACUUUCAGCCCAUGACUGAAGAGUUGCUGAAACAACAAAAGCUGAAUUCACAUGAGACCACUAUAACUCAGCAGUCUGUAUCUGAUUCCCACUUGGCAGAACUCCAGGAAAAAAUCCAGCAAACAGAGGCCACCAACAAGAUUCUUCAAGAGAAACUUAAUGAAAUGAGCUAUGAACUAAAGUGUGCUCAGGAGUCGUCUCAAAAGCAAGAUGGUACAAUUCAGAACCUCAAGGAAACUCUGAAAAGCAGGGAACGUGAGACUGAGGAGUUGUACCAGGUAAUUGAAGGUCAAAAUGACACAAUGGCAAAGCUUCGAGAAAUGCUGCACCAAAGCCAGCUUGGACAACUUCACAGCUCAGAGGGUACUUCUCCAGCUCAGCAACAGGUAGCUCUGCUUGAUCUUCAGAGUGCUYUAUUCUGCAGCCAACUUGAAAUACAGAAGCUCCAGAGGGUGGUACGACAGAAAGAGCGCCAACUGGCUGAUGCCAAACAAUGUGUGCAAUUUGUAGAGGCUGCAGCACACGAGAGUGAACAGCAGAAAGAGGCUUCUUGGAAACAUAACCAGGAAUUGCGAAAAGCCUUGCAGCAGCUACAAGAAGAAUUGCAGAAUAAGAGCCAACAGCUUCGUGCCUGGGAGGCUGAAAAAUACAAUGAGAUUCGAACCCAGGAACAAAACAUCCAGCACCUAAACCAUAGUCUGAGUCACAAGGAGCAGUUGCUUCAGGAAUUUCGGGAGCUCCUACAGUAUCGAGAUAACUCAGACAAAACCCUUGAAGCAAAUGAAAUGUUGCUUGAGAAACUUCGCCAGCGAAUACAUGAUAAAGCUGUUGCUCUGGAGCGGGCUAUAGAUGAAAAAUUCUCUGCUCUAGAAGAGAAAGAAAAAGAACUGCGCCAGCUUCGUCUUGCUGUGAGAGAGCGAGAUCAUGACUUAGAGAGACUGCGCGAUGUCCUCUCCUCCAAUGAAGCUACUAUGCAAAGUAUGGAGAGUCUCCUGAGGGCCAAAGGCCUGGAAGUGGAACAGUUAUCUACUACCUGUCAAAACCUCCAGUGGCUGAAAGAAGAAAUGGAAACCAAAUUUAGCCGUUGGCAGAAGGAACAAGAGAGUAUCAUUCAGCAGUUACAGACGUCUCUUCAUGAUAGGAACAAAGAAGUGGAGGAUCUUAGUGCAACACUGCUCUGCAAACUUGGACCAGGGCAGAGUGAGAUAGCAGAGGAGCUGUGCCAGCGUCUACAGCGAAAGGAAAGGAUGCUGCAGGACCUUCUAAGUGAUCGAAAUAAACAAGUGCUGGAACAUGAAAUGGAGAUUCAAGGCCUGCUUCAGUCUGUGAGCACCAGGGAGCAGGAAAGCCAAGCUGCUGCAGAGAAGUUGGUGCAAGCCUUAAUGGAAAGAAAUUCAGAAUUACAGGCCCUGCGCCAAUAUUUAGGAGGGAGAGACUCCCUGAUGUCCCAAGCACCCAUCUCUAACCAACAAGCUGAAGUUACCCCCACUGGCCGUCUUGGAAAACAGACUGAUCAAGGUUCAAUGCAGAUACCUUCCAGAGAUGAUAGCACUUCAUUGACUGCCAAAGAGGAUGUCAGCAUACCCAGAUCCACAUUAGGAGACUUGGACACAGUUGCAGGGCUGGAAAAAGAACUGAGUAAUGCCAAAGAGGAACUUGAACUCAUGGCUAAAAAAGAAAGAGAAAGUCAGAUGGAACUUUCUGCUCUACAGUCCAUGAUGGCUGUGCAGGAAGAAGAGCUGCAGGUGCAGGCUGCUGAUAUGGAGUCUCUGACCAGGAACAUACAGAUUAAAGAAGAUCUCAUAAAGGACCUGCAAAUGCAACUGGUUGAUCCUGAAGACAUACCAGCUAUGGAACGCCUGACCCAGGAAGUCUUACUUCUUCGGGAAAAAGUUGCUUCAGUAGAAUCCCAGGGUCAAGAAAUUUCAGGAAACCGAAGACAACAGUUGCUGCUGAUGCUAGAAGGACUAGUAGAUGAACGGAGUCGGCUCAAUGAGGCCUUACAAGCAGAGAGACAGCUCUAUAGCAGUCUGGUGAAGUUCCAUGCCCAYCCAGAGAGCUCUGAGAGAGm6ACCGAACUCUGCAGGUGGAACUGGAAGGGGCUCAGGUGUUACGCAGUCGGCUAGAAGAAGUUCUUGGAAGAAGCUUGGAGCGCUUAAm6ACAGGCUGGAGm6ACCCUGGCCGCCAUUGGAGGUGGGGAm6ACUGGAAAGUGUGCGAAUUCAUCACAAGCAUGCCUACUGAGCACUGGCGGGUCAGm6ACUGCAGCCCAGGAUGGAAAACCUUGUUUGCACUAACCAGAAAGAUCCUUGUCUGAUUUUGGCAGAAUUAAACGGUGm6ACUUACUAAUGAUAGAm6ACUGGUACAAGUAGCAUCAACUACAAAGUGAAACUCACUYUAGCCUACAUGGAUCUCACUGUACAUACAUAUCAAUCCCUAAAUUGAAUGGUGGAGGUUGCAAAGUGUAUUUGCACAUUUUAAAUCAUUCUGUUUUAGUUUUUCCACUUUUAUUCAUUCUUAUCCCUAGCCCCUUCUCGUUCCCUCAYCCCUUC
Sequence (MODOMICS CODE ENCODING)	AGAACCCAGGCGGGGCGGGGCCGGGAAAGGUGAGGCUGCUGGCGGGAAGCGGGGGCGGCGCGCAGCGGUACCUAGCGGCGCUGCCCCGCUGGCAGCCGGAGGACGUGGCACUGUCCGAGAAUGCAGGGAGGGGAUUCGUCUUUCUCCUCCCCGCGAGGAGGAGCCUCGACAUCCUGCAGAGGCGGGAGGAUCCUUGAGGGCACUGGUGCGACUUUCAGCCCAUGACUGAAGAGUUGCUGAAACAACAAAAGCUGAAUUCACAUGAGACCACUAUAACUCAGCAGUCUGUAUCUGAUUCCCACUUGGCAGAACUCCAGGAAAAAAUCCAGCAAACAGAGGCCACCAACAAGAUUCUUCAAGAGAAACUUAAUGAAAUGAGCUAUGAACUAAAGUGUGCUCAGGAGUCGUCUCAAAAGCAAGAUGGUACAAUUCAGAACCUCAAGGAAACUCUGAAAAGCAGGGAACGUGAGACUGAGGAGUUGUACCAGGUAAUUGAAGGUCAAAAUGACACAAUGGCAAAGCUUCGAGAAAUGCUGCACCAAAGCCAGCUUGGACAACUUCACAGCUCAGAGGGUACUUCUCCAGCUCAGCAACAGGUAGCUCUGCUUGAUCUUCAGAGUGCU2000000009UUAUUCUGCAGCCAACUUGAAAUACAGAAGCUCCAGAGGGUGGUACGACAGAAAGAGCGCCAACUGGCUGAUGCCAAACAAUGUGUGCAAUUUGUAGAGGCUGCAGCACACGAGAGUGAACAGCAGAAAGAGGCUUCUUGGAAACAUAACCAGGAAUUGCGAAAAGCCUUGCAGCAGCUACAAGAAGAAUUGCAGAAUAAGAGCCAACAGCUUCGUGCCUGGGAGGCUGAAAAAUACAAUGAGAUUCGAACCCAGGAACAAAACAUCCAGCACCUAAACCAUAGUCUGAGUCACAAGGAGCAGUUGCUUCAGGAAUUUCGGGAGCUCCUACAGUAUCGAGAUAACUCAGACAAAACCCUUGAAGCAAAUGAAAUGUUGCUUGAGAAACUUCGCCAGCGAAUACAUGAUAAAGCUGUUGCUCUGGAGCGGGCUAUAGAUGAAAAAUUCUCUGCUCUAGAAGAGAAAGAAAAAGAACUGCGCCAGCUUCGUCUUGCUGUGAGAGAGCGAGAUCAUGACUUAGAGAGACUGCGCGAUGUCCUCUCCUCCAAUGAAGCUACUAUGCAAAGUAUGGAGAGUCUCCUGAGGGCCAAAGGCCUGGAAGUGGAACAGUUAUCUACUACCUGUCAAAACCUCCAGUGGCUGAAAGAAGAAAUGGAAACCAAAUUUAGCCGUUGGCAGAAGGAACAAGAGAGUAUCAUUCAGCAGUUACAGACGUCUCUUCAUGAUAGGAACAAAGAAGUGGAGGAUCUUAGUGCAACACUGCUCUGCAAACUUGGACCAGGGCAGAGUGAGAUAGCAGAGGAGCUGUGCCAGCGUCUACAGCGAAAGGAAAGGAUGCUGCAGGACCUUCUAAGUGAUCGAAAUAAACAAGUGCUGGAACAUGAAAUGGAGAUUCAAGGCCUGCUUCAGUCUGUGAGCACCAGGGAGCAGGAAAGCCAAGCUGCUGCAGAGAAGUUGGUGCAAGCCUUAAUGGAAAGAAAUUCAGAAUUACAGGCCCUGCGCCAAUAUUUAGGAGGGAGAGACUCCCUGAUGUCCCAAGCACCCAUCUCUAACCAACAAGCUGAAGUUACCCCCACUGGCCGUCUUGGAAAACAGACUGAUCAAGGUUCAAUGCAGAUACCUUCCAGAGAUGAUAGCACUUCAUUGACUGCCAAAGAGGAUGUCAGCAUACCCAGAUCCACAUUAGGAGACUUGGACACAGUUGCAGGGCUGGAAAAAGAACUGAGUAAUGCCAAAGAGGAACUUGAACUCAUGGCUAAAAAAGAAAGAGAAAGUCAGAUGGAACUUUCUGCUCUACAGUCCAUGAUGGCUGUGCAGGAAGAAGAGCUGCAGGUGCAGGCUGCUGAUAUGGAGUCUCUGACCAGGAACAUACAGAUUAAAGAAGAUCUCAUAAAGGACCUGCAAAUGCAACUGGUUGAUCCUGAAGACAUACCAGCUAUGGAACGCCUGACCCAGGAAGUCUUACUUCUUCGGGAAAAAGUUGCUUCAGUAGAAUCCCAGGGUCAAGAAAUUUCAGGAAACCGAAGACAACAGUUGCUGCUGAUGCUAGAAGGACUAGUAGAUGAACGGAGUCGGCUCAAUGAGGCCUUACAAGCAGAGAGACAGCUCUAUAGCAGUCUGGUGAAGUUCCAUGCCCA2000000009UCCAGAGAGCUCUGAGAGAG2000000006ACCGAACUCUGCAGGUGGAACUGGAAGGGGCUCAGGUGUUACGCAGUCGGCUAGAAGAAGUUCUUGGAAGAAGCUUGGAGCGCUUAA2000000006ACAGGCUGGAG2000000006ACCCUGGCCGCCAUUGGAGGUGGGGA2000000006ACUGGAAAGUGUGCGAAUUCAUCACAAGCAUGCCUACUGAGCACUGGCGGGUCAG2000000006ACUGCAGCCCAGGAUGGAAAACCUUGUUUGCACUAACCAGAAAGAUCCUUGUCUGAUUUUGGCAGAAUUAAACGGUG2000000006ACUUACUAAUGAUAGA2000000006ACUGGUACAAGUAGCAUCAACUACAAAGUGAAACUCACU2000000009UUAGCCUACAUGGAUCUCACUGUACAUACAUAUCAAUCCCUAAAUUGAAUGGUGGAGGUUGCAAAGUGUAUUUGCACAUUUUAAAUCAUUCUGUUUUAGUUUUUCCACUUUUAUUCAUUCUUAUCCCUAGCCCCUUCUCGUUCCCUCA2000000009UCCCUUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	624	2261	2281	2368	2379	2405	2460	2537	2553	2592	2740
Modification Positions	Y	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	Y
Genomic Coordinates	1:148962488:+	1:148979841:+	1:148981281:+	1:148981368:+	1:148981379:+	1:148981405:+	1:148981460:+	1:148981537:+	1:148981553:+	1:148981592:+	1:148981740:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv msuJfBpJvM5H UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8