General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000368407
Gene ID:	ENSG00000169242
Gene Name:	EFNA1
Sequence (UNICHARACTER ENCODING)	ЖGAUCUGUGAGCCCAGCGCUGACUGCGCCGCGGAGAAAGCCAGUGGGAACCCAGACCCAUAGGAGЖCCCGCGUCCCCGCUCGGCCUGGCCAGGCCCCGCGCUAUGGAGUUCCUCUGGGCCCCUCUCUUGGGUCUGUGCUGCAGUCUGGCCGCUGCUGAUCGCCACACCGUCUUCUGGAACAGUUCAAAUCCCAAGUUCCGGAAUGAGGACUACACCAUACЖUGUGCAGCUGAAUGACUACGUGGACAUCAUCUGUCCGCACUAUGAAGAUCACUCUGUGGCAGACGCUGCCAUGGAGCAGUACAUACUGUACCUGGUGGAGCAUGAGGAGUACCAGCUGUGCCAGCCCCAGUCCAAGGACCAAGUCCGCUGGCAGUGCAACCGGCCCAGUGCCAAGCAUGGCBCGGAGAAGCUGUCUGAGAAGUUCCAGCGCUUCACACCUUUCACCCUGGGCAAGGAGUUCAAAGAAGGACACAGCUACUACUACAUCUCCAAACCCAPCCACCAGCAUGAAGACCGCUGCUUGAGGUUGAAGGUGACUGUCAGUGGCAAAAUCACUCACAGUCCUCAGGCCCAUGACAAUCCACAGGAGAAGAGACUUGCAGCAGAUGACCCAGAGGUGCGGGUUCUACЖUAGCAUCGGUCACAGUGCUGCCCCACGCCUCUUCCCACUUGCCUGGЖCUGUGCUGCUCCUUCCACUUCUGCUGCUGCAAACCCCGUGAAGGUGUAUGCCACACCUGGCCUUAAAGAGGGЖCAGGCUGAAGAGAGGGACAGGCACUCCAAACCUGUCUUGGGGCCACUUUCAGAGCCCCCAGCCCUGGGAACCACUCCCACCACAGGCAUAAGCUAUCACCUAGCAGCCUCAAAACGGGUCAGUAUUAAGGUUUUCAACCGGAAGGAGGCCAACCAGCCCGACAGUGCCAPCCCCACCUUCACCUCGGAGGGAUGGAGAAAGAAGUGGAGACAGUCCUUUCCCACCAUUCCUGCCUPUAAGCCAAAGAAACAAGCUGUGCAGGCAUGGUCCCUUAAGGCACAGUGGGAGCUGAGCUGGAAGGGGCCACGUGGAUGGGCAAAGCUUGUCAAAGAUGCCCCCUCCAGGAGAGAGCCAGGAUGCCCAGAUGAЖCUGЖCUGAAGGAAAAGCAAGAAACAGUUUCUUGCUUGGAAGCCAGGUACAGGAGAGGCAGCAUGCUUGGGCUGACCCAGCAUCUCCCAGCAAGACCUCAUCUGUGGAGCUGCCACAGAGAAGUUUGUAGCCAGGUACUGCAUUCUCUCCCAPCCUGGGGCAGCACUCCCCAGAGCUGUGCCAGCAGGGGGGCUGUGCCAACCUGUUCUUAGAGUGUAGCUGUAAGGGCAGUGCCCAUGUGUACAUUCUGCCUAGAGUGUAGCCUAAAGGGCAGGGCCCACGUGUAUAGUAUCUGUAUAUAAGUUGCUGUGUGUCUGUCCUGAUUUCUACAACUGGAGUUUUUUUAUACAAUGUUCUUUGUCUCAAAAUAAAGCAAUGUGUUUUUUCGGACAUGCUUUUCUGCCACUCCAUAUUAAAACAUAUGACCAUUGA
Sequence (SHORT NAMES ENCODING)	m6AGAUCUGUGAGCCCAGCGCUGACUGCGCCGCGGAGAAAGCCAGUGGGAACCCAGACCCAUAGGAGm6ACCCGCGUCCCCGCUCGGCCUGGCCAGGCCCCGCGCUAUGGAGUUCCUCUGGGCCCCUCUCUUGGGUCUGUGCUGCAGUCUGGCCGCUGCUGAUCGCCACACCGUCUUCUGGAACAGUUCAAAUCCCAAGUUCCGGAAUGAGGACUACACCAUACm6AUGUGCAGCUGAAUGACUACGUGGACAUCAUCUGUCCGCACUAUGAAGAUCACUCUGUGGCAGACGCUGCCAUGGAGCAGUACAUACUGUACCUGGUGGAGCAUGAGGAGUACCAGCUGUGCCAGCCCCAGUCCAAGGACCAAGUCCGCUGGCAGUGCAACCGGCCCAGUGCCAAGCAUGGCCmCGGAGAAGCUGUCUGAGAAGUUCCAGCGCUUCACACCUUUCACCCUGGGCAAGGAGUUCAAAGAAGGACACAGCUACUACUACAUCUCCAAACCCAYCCACCAGCAUGAAGACCGCUGCUUGAGGUUGAAGGUGACUGUCAGUGGCAAAAUCACUCACAGUCCUCAGGCCCAUGACAAUCCACAGGAGAAGAGACUUGCAGCAGAUGACCCAGAGGUGCGGGUUCUACm6AUAGCAUCGGUCACAGUGCUGCCCCACGCCUCUUCCCACUUGCCUGGm6ACUGUGCUGCUCCUUCCACUUCUGCUGCUGCAAACCCCGUGAAGGUGUAUGCCACACCUGGCCUUAAAGAGGGm6ACAGGCUGAAGAGAGGGACAGGCACUCCAAACCUGUCUUGGGGCCACUUUCAGAGCCCCCAGCCCUGGGAACCACUCCCACCACAGGCAUAAGCUAUCACCUAGCAGCCUCAAAACGGGUCAGUAUUAAGGUUUUCAACCGGAAGGAGGCCAACCAGCCCGACAGUGCCAYCCCCACCUUCACCUCGGAGGGAUGGAGAAAGAAGUGGAGACAGUCCUUUCCCACCAUUCCUGCCUYUAAGCCAAAGAAACAAGCUGUGCAGGCAUGGUCCCUUAAGGCACAGUGGGAGCUGAGCUGGAAGGGGCCACGUGGAUGGGCAAAGCUUGUCAAAGAUGCCCCCUCCAGGAGAGAGCCAGGAUGCCCAGAUGAm6ACUGm6ACUGAAGGAAAAGCAAGAAACAGUUUCUUGCUUGGAAGCCAGGUACAGGAGAGGCAGCAUGCUUGGGCUGACCCAGCAUCUCCCAGCAAGACCUCAUCUGUGGAGCUGCCACAGAGAAGUUUGUAGCCAGGUACUGCAUUCUCUCCCAYCCUGGGGCAGCACUCCCCAGAGCUGUGCCAGCAGGGGGGCUGUGCCAACCUGUUCUUAGAGUGUAGCUGUAAGGGCAGUGCCCAUGUGUACAUUCUGCCUAGAGUGUAGCCUAAAGGGCAGGGCCCACGUGUAUAGUAUCUGUAUAUAAGUUGCUGUGUGUCUGUCCUGAUUUCUACAACUGGAGUUUUUUUAUACAAUGUUCUUUGUCUCAAAAUAAAGCAAUGUGUUUUUUCGGACAUGCUUUUCUGCCACUCCAUAUUAAAACAUAUGACCAUUGA
Sequence (MODOMICS CODE ENCODING)	2000000006AGAUCUGUGAGCCCAGCGCUGACUGCGCCGCGGAGAAAGCCAGUGGGAACCCAGACCCAUAGGAG2000000006ACCCGCGUCCCCGCUCGGCCUGGCCAGGCCCCGCGCUAUGGAGUUCCUCUGGGCCCCUCUCUUGGGUCUGUGCUGCAGUCUGGCCGCUGCUGAUCGCCACACCGUCUUCUGGAACAGUUCAAAUCCCAAGUUCCGGAAUGAGGACUACACCAUAC2000000006AUGUGCAGCUGAAUGACUACGUGGACAUCAUCUGUCCGCACUAUGAAGAUCACUCUGUGGCAGACGCUGCCAUGGAGCAGUACAUACUGUACCUGGUGGAGCAUGAGGAGUACCAGCUGUGCCAGCCCCAGUCCAAGGACCAAGUCCGCUGGCAGUGCAACCGGCCCAGUGCCAAGCAUGGC2000000090CCGGAGAAGCUGUCUGAGAAGUUCCAGCGCUUCACACCUUUCACCCUGGGCAAGGAGUUCAAAGAAGGACACAGCUACUACUACAUCUCCAAACCCA2000000009UCCACCAGCAUGAAGACCGCUGCUUGAGGUUGAAGGUGACUGUCAGUGGCAAAAUCACUCACAGUCCUCAGGCCCAUGACAAUCCACAGGAGAAGAGACUUGCAGCAGAUGACCCAGAGGUGCGGGUUCUAC2000000006AUAGCAUCGGUCACAGUGCUGCCCCACGCCUCUUCCCACUUGCCUGG2000000006ACUGUGCUGCUCCUUCCACUUCUGCUGCUGCAAACCCCGUGAAGGUGUAUGCCACACCUGGCCUUAAAGAGGG2000000006ACAGGCUGAAGAGAGGGACAGGCACUCCAAACCUGUCUUGGGGCCACUUUCAGAGCCCCCAGCCCUGGGAACCACUCCCACCACAGGCAUAAGCUAUCACCUAGCAGCCUCAAAACGGGUCAGUAUUAAGGUUUUCAACCGGAAGGAGGCCAACCAGCCCGACAGUGCCA2000000009UCCCCACCUUCACCUCGGAGGGAUGGAGAAAGAAGUGGAGACAGUCCUUUCCCACCAUUCCUGCCU2000000009UUAAGCCAAAGAAACAAGCUGUGCAGGCAUGGUCCCUUAAGGCACAGUGGGAGCUGAGCUGGAAGGGGCCACGUGGAUGGGCAAAGCUUGUCAAAGAUGCCCCCUCCAGGAGAGAGCCAGGAUGCCCAGAUGA2000000006ACUG2000000006ACUGAAGGAAAAGCAAGAAACAGUUUCUUGCUUGGAAGCCAGGUACAGGAGAGGCAGCAUGCUUGGGCUGACCCAGCAUCUCCCAGCAAGACCUCAUCUGUGGAGCUGCCACAGAGAAGUUUGUAGCCAGGUACUGCAUUCUCUCCCA2000000009UCCUGGGGCAGCACUCCCCAGAGCUGUGCCAGCAGGGGGGCUGUGCCAACCUGUUCUUAGAGUGUAGCUGUAAGGGCAGUGCCCAUGUGUACAUUCUGCCUAGAGUGUAGCCUAAAGGGCAGGGCCCACGUGUAUAGUAUCUGUAUAUAAGUUGCUGUGUGUCUGUCCUGAUUUCUACAACUGGAGUUUUUUUAUACAAUGUUCUUUGUCUCAAAAUAAAGCAAUGUGUUUUUUCGGACAUGCUUUUCUGCCACUCCAUAUUAAAACAUAUGACCAUUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1	66	221	403	500	632	679	752	922	988	1121	1125	1273
Modification Positions	m6A	m6A	m6A	Cm	Y	m6A	m6A	m6A	Y	Y	m6A	m6A	Y
Genomic Coordinates	1:155127876:+	1:155127941:+	1:155131365:+	1:155131547:+	1:155133512:+	1:155133979:+	1:155134026:+	1:155134099:+	1:155134269:+	1:155134335:+	1:155134468:+	1:155134472:+	1:155134620:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	dknfVe6BK8aP Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	jaSvBXBkn3xs YkSG92k4EHDM	dknfVe6BK8aP Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 dknfVe6BK8aP Yfn77uLS5tv8	dknfVe6BK8aP Mk6ShCGm6RBJ Yfn77uLS5tv8	dknfVe6BK8aP Mk6ShCGm6RBJ Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 nfCHyrYzE6fB CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ JkWoGWVwjNda Yfn77uLS5tv8	CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ JkWoGWVwjNda Yfn77uLS5tv8