General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000367482
Gene ID:	ENSG00000116690
Gene Name:	PRG4
Sequence (UNICHARACTER ENCODING)	AUCUAUCCUUUACGGCAAGGGUACCUACGGUACCUGAAAACAACGAUGGCAUGGAAAACACUUCCCAUUUACCUGUUGUUGCUGCUGUCUGUUUUCGUGAUUCAGCAAGUUUCAUCUCAAGAGCUUUCCUGUAAAGGCCGCUGCUUUGAGUCCUUCGAGAGAGGGAGGGAGUGUGACUGCGACGCCCAAUGUAAGAAGUAUGACAAGUGCUGUCCCGAUUAUGAGAGUUUCUGUGCAGAAGUAAAAGAUAACAAGAAGAACAGAACUAAAAAGAAACCUACCCCCAAACCACCAGUUGUAGAUGAAGCUGGAAGUGGAUUGGЖCAAUGGUGACUUCAAGGUCACAACUCCUGACACGUCUACCACCCAACACAAUAAAGUCAGCACAUCUCCCAAGAUCACAACAGCAAAACCAAUAAAUCCCAGACCCAGUCUUCCACCUAAUUCUGAUACAUCUAAAGAGACGUCUUUGACAGUGAAUAAAGAGACAACAGUUGAAACUAAAGAAACUACUACAACAAAUAAACAGACUUCAACUGAUGGAAAAGAGAAGACUACUUCCGCUAAAGAGACACAAAGUAUAGAGAAAACAUCUGCUAAAGAUUUAGCACCCACAUCUAAAGUGCUGGCUAAACCUACACCCAAAGCUGAAACUACAACCAAAGGCCCUGCUCUCACCACUCCCAAGGAGCCCACGCCCACCACUCCCAAGGAGCCUGCAUCUACCACACCCAAAGAGCCCACACCUACCACCAUCAAGUCUGCACCCACCACCCCCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUACACCCACCACUCCCAAGGAGCCUGCACCCACCACCAAGGAGCCUGCACCCACCACUCCCAAAGAGCCUGCACCCACUGCCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUUCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUACCAAGGAGCCUGCACCCACCACUACCAAGUCUGCACCCACCACUCCCAAGGAGCCUUCACCCACCACCACCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAACCUGCACCCACCACCACCAAGAAGCCUGCACCCACCACUCCCAAAGAGCCUGCCCCAACUACCCCCAAGGAGЖCUGCACCCACCACCCCCAAGAAGCUCACGCCCACCACCCCCGAGAAGCUCGCACCCACCACCCCUGAGAAGCCCGCACCCACCACCCCUGAGGAGCUCGCACCCACCACCCCUGAGGAGCCCACACCCACCACCCCUGAGGAGCCUGCUCCCACCACUCCCAAGGCAGCGGCUCCCAACACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGЖCUGCUCCAACUACCCCUAAAGGGЖCUGCUCCAACUACCCUCAAGGAACCUGCACCCACUACUCCCAAGAAGCCUGCCCCCAAGGAGCUUGCACCCACCACCACCAAGGAGCCCACAUCCACCACCUCUGACAAGCCCGCUCCAACUACCCCUAAGGGGЖCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGGGЖCUGCUCCAACUACCCUCAAGGAACCUGCACCCACUACUCCCAAGAAGCCUGCCCCCAAGGAGCUUGCACCCACCACCACCAAGGGGCCCACAUCCACCACCUCUGACAAGCCUGCUCCAACUACACCUAAGGAGACUGCUCCAACUACCCCCAAGGAGCCUGCACCCACUACCCCCAAGAAGCCUGCUCCAACUACUCCUGAGACACCUCCUCCAACCACUUCAGAGGUCUCUACUCCAACUACCACCAAGGAGCCUACCACUAUCCACAAAAGCCCUGAUGAAUCAACUCCUGAGCUUUCUGCAGAACCCACACCAAAAGCUCUUGAAAACAGUCCCAAGGAACCUGGUGUACCUACAACUAAGACUCCUGCAGCGACUAAACCUGAAAUGACUACAACAGCUAAAGACAAGACAACAGAAAGAGЖCUUACGUACUACACCUGAAACUACAACUGCUGCACCUAAGAUGACAAAAGAGACAGCAACUACAACAGAAAAAACUACCGAAUCCAAAAUAACAGCUACAACCACACAAGUAACAUCUACCACAACUCAAGAUACCACACCAUUCAAAAUUACUACUCUUAAAACAACUACUCUUGCACCCAAAGUAACUACAAC
Sequence (SHORT NAMES ENCODING)	AUCUAUCCUUUACGGCAAGGGUACCUACGGUACCUGAAAACAACGAUGGCAUGGAAAACACUUCCCAUUUACCUGUUGUUGCUGCUGUCUGUUUUCGUGAUUCAGCAAGUUUCAUCUCAAGAGCUUUCCUGUAAAGGCCGCUGCUUUGAGUCCUUCGAGAGAGGGAGGGAGUGUGACUGCGACGCCCAAUGUAAGAAGUAUGACAAGUGCUGUCCCGAUUAUGAGAGUUUCUGUGCAGAAGUAAAAGAUAACAAGAAGAACAGAACUAAAAAGAAACCUACCCCCAAACCACCAGUUGUAGAUGAAGCUGGAAGUGGAUUGGm6ACAAUGGUGACUUCAAGGUCACAACUCCUGACACGUCUACCACCCAACACAAUAAAGUCAGCACAUCUCCCAAGAUCACAACAGCAAAACCAAUAAAUCCCAGACCCAGUCUUCCACCUAAUUCUGAUACAUCUAAAGAGACGUCUUUGACAGUGAAUAAAGAGACAACAGUUGAAACUAAAGAAACUACUACAACAAAUAAACAGACUUCAACUGAUGGAAAAGAGAAGACUACUUCCGCUAAAGAGACACAAAGUAUAGAGAAAACAUCUGCUAAAGAUUUAGCACCCACAUCUAAAGUGCUGGCUAAACCUACACCCAAAGCUGAAACUACAACCAAAGGCCCUGCUCUCACCACUCCCAAGGAGCCCACGCCCACCACUCCCAAGGAGCCUGCAUCUACCACACCCAAAGAGCCCACACCUACCACCAUCAAGUCUGCACCCACCACCCCCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUACACCCACCACUCCCAAGGAGCCUGCACCCACCACCAAGGAGCCUGCACCCACCACUCCCAAAGAGCCUGCACCCACUGCCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUUCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUACCAAGGAGCCUGCACCCACCACUACCAAGUCUGCACCCACCACUCCCAAGGAGCCUUCACCCACCACCACCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAACCUGCACCCACCACCACCAAGAAGCCUGCACCCACCACUCCCAAAGAGCCUGCCCCAACUACCCCCAAGGAGm6ACUGCACCCACCACCCCCAAGAAGCUCACGCCCACCACCCCCGAGAAGCUCGCACCCACCACCCCUGAGAAGCCCGCACCCACCACCCCUGAGGAGCUCGCACCCACCACCCCUGAGGAGCCCACACCCACCACCCCUGAGGAGCCUGCUCCCACCACUCCCAAGGCAGCGGCUCCCAACACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGm6ACUGCUCCAACUACCCCUAAAGGGm6ACUGCUCCAACUACCCUCAAGGAACCUGCACCCACUACUCCCAAGAAGCCUGCCCCCAAGGAGCUUGCACCCACCACCACCAAGGAGCCCACAUCCACCACCUCUGACAAGCCCGCUCCAACUACCCCUAAGGGGm6ACUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGGGm6ACUGCUCCAACUACCCUCAAGGAACCUGCACCCACUACUCCCAAGAAGCCUGCCCCCAAGGAGCUUGCACCCACCACCACCAAGGGGCCCACAUCCACCACCUCUGACAAGCCUGCUCCAACUACACCUAAGGAGACUGCUCCAACUACCCCCAAGGAGCCUGCACCCACUACCCCCAAGAAGCCUGCUCCAACUACUCCUGAGACACCUCCUCCAACCACUUCAGAGGUCUCUACUCCAACUACCACCAAGGAGCCUACCACUAUCCACAAAAGCCCUGAUGAAUCAACUCCUGAGCUUUCUGCAGAACCCACACCAAAAGCUCUUGAAAACAGUCCCAAGGAACCUGGUGUACCUACAACUAAGACUCCUGCAGCGACUAAACCUGAAAUGACUACAACAGCUAAAGACAAGACAACAGAAAGAGm6ACUUACGUACUACACCUGAAACUACAACUGCUGCACCUAAGAUGACAAAAGAGACAGCAACUACAACAGAAAAAACUACCGAAUCCAAAAUAACAGCUACAACCACACAAGUAACAUCUACCACAACUCAAGAUACCACACCAUUCAAAAUUACUACUCUUAAAACAACUACUCUUGCACCCAAAGUAACUACAAC
Sequence (MODOMICS CODE ENCODING)	AUCUAUCCUUUACGGCAAGGGUACCUACGGUACCUGAAAACAACGAUGGCAUGGAAAACACUUCCCAUUUACCUGUUGUUGCUGCUGUCUGUUUUCGUGAUUCAGCAAGUUUCAUCUCAAGAGCUUUCCUGUAAAGGCCGCUGCUUUGAGUCCUUCGAGAGAGGGAGGGAGUGUGACUGCGACGCCCAAUGUAAGAAGUAUGACAAGUGCUGUCCCGAUUAUGAGAGUUUCUGUGCAGAAGUAAAAGAUAACAAGAAGAACAGAACUAAAAAGAAACCUACCCCCAAACCACCAGUUGUAGAUGAAGCUGGAAGUGGAUUGG2000000006ACAAUGGUGACUUCAAGGUCACAACUCCUGACACGUCUACCACCCAACACAAUAAAGUCAGCACAUCUCCCAAGAUCACAACAGCAAAACCAAUAAAUCCCAGACCCAGUCUUCCACCUAAUUCUGAUACAUCUAAAGAGACGUCUUUGACAGUGAAUAAAGAGACAACAGUUGAAACUAAAGAAACUACUACAACAAAUAAACAGACUUCAACUGAUGGAAAAGAGAAGACUACUUCCGCUAAAGAGACACAAAGUAUAGAGAAAACAUCUGCUAAAGAUUUAGCACCCACAUCUAAAGUGCUGGCUAAACCUACACCCAAAGCUGAAACUACAACCAAAGGCCCUGCUCUCACCACUCCCAAGGAGCCCACGCCCACCACUCCCAAGGAGCCUGCAUCUACCACACCCAAAGAGCCCACACCUACCACCAUCAAGUCUGCACCCACCACCCCCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUACACCCACCACUCCCAAGGAGCCUGCACCCACCACCAAGGAGCCUGCACCCACCACUCCCAAAGAGCCUGCACCCACUGCCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGGAGCCUUCACCCACCACUCCCAAGGAGCCUGCACCCACCACCACCAAGUCUGCACCCACCACUACCAAGGAGCCUGCACCCACCACUACCAAGUCUGCACCCACCACUCCCAAGGAGCCUUCACCCACCACCACCAAGGAGCCUGCACCCACCACUCCCAAGGAGCCUGCACCCACCACCCCCAAGAAGCCUGCCCCAACUACCCCCAAGGAGCCUGCACCCACCACUCCCAAGGAACCUGCACCCACCACCACCAAGAAGCCUGCACCCACCACUCCCAAAGAGCCUGCCCCAACUACCCCCAAGGAG2000000006ACUGCACCCACCACCCCCAAGAAGCUCACGCCCACCACCCCCGAGAAGCUCGCACCCACCACCCCUGAGAAGCCCGCACCCACCACCCCUGAGGAGCUCGCACCCACCACCCCUGAGGAGCCCACACCCACCACCCCUGAGGAGCCUGCUCCCACCACUCCCAAGGCAGCGGCUCCCAACACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAG2000000006ACUGCUCCAACUACCCCUAAAGGG2000000006ACUGCUCCAACUACCCUCAAGGAACCUGCACCCACUACUCCCAAGAAGCCUGCCCCCAAGGAGCUUGCACCCACCACCACCAAGGAGCCCACAUCCACCACCUCUGACAAGCCCGCUCCAACUACCCCUAAGGGG2000000006ACUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGAGCCUGCUCCAACUACCCCUAAGGGG2000000006ACUGCUCCAACUACCCUCAAGGAACCUGCACCCACUACUCCCAAGAAGCCUGCCCCCAAGGAGCUUGCACCCACCACCACCAAGGGGCCCACAUCCACCACCUCUGACAAGCCUGCUCCAACUACACCUAAGGAGACUGCUCCAACUACCCCCAAGGAGCCUGCACCCACUACCCCCAAGAAGCCUGCUCCAACUACUCCUGAGACACCUCCUCCAACCACUUCAGAGGUCUCUACUCCAACUACCACCAAGGAGCCUACCACUAUCCACAAAAGCCCUGAUGAAUCAACUCCUGAGCUUUCUGCAGAACCCACACCAAAAGCUCUUGAAAACAGUCCCAAGGAACCUGGUGUACCUACAACUAAGACUCCUGCAGCGACUAAACCUGAAAUGACUACAACAGCUAAAGACAAGACAACAGAAAGAG2000000006ACUUACGUACUACACCUGAAACUACAACUGCUGCACCUAAGAUGACAAAAGAGACAGCAACUACAACAGAAAAAACUACCGAAUCCAAAAUAACAGCUACAACCACACAAGUAACAUCUACCACAACUCAAGAUACCACACCAUUCAAAAUUACUACUCUUAAAACAACUACUCUUGCACCCAAAGUAACUACAAC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	323	1489	1753	1777	1912	1984	2411
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	1:186306399:+	1:186307565:+	1:186307829:+	1:186307853:+	1:186307988:+	1:186308060:+	1:186308487:+
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn	5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek jNkxUQNx8GRd nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB WdHxkJGRmFxn