General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000308769
Gene ID:	ENSG00000143207
Gene Name:	COP1
Sequence (UNICHARACTER ENCODING)	AUGUCUGGUAGCCGCCAGGCCGGGUCGGGCUCCGCUGGGACAAGCCCCGGGUCCUCGGCGGCCUCCUCGGUGACUUCCGCCUCCUCGUCUUUAUCCUCUUCCCCGUCGCCGCCUUCCGUGGCGGUUUCGGCGGCAGCGCUGGUGUCCGGCGGGGUGGCCCAGGCCGCCGGCUCGGGCGGCCUCGGGGGCCCGGUGCGGCCUGUGUUGGUGGCGCCCGCCGUAUCGGGUAGCGGCGGCGGGGCGGUGUCCACGGGCCUGUCCCGGCACAGCUGCGCGGCCAGGCCCAGCGCCGGCGUAGGAGGCAGCAGCUCCAGCCUAGGCAGCGGCAGCAGGAAGCGACCUCUCCUCGCCCCCCUCUGCAACGGGCUCAUCAACUCCUACGAGGACAAAAGCAACGACUUCGUAUGCCCCAUCUGCUUUGAUAUGAUUGAAGAAGCAUACAUGACAAAAUGUGGCCACAGCUUUUGCUACAAGUGUAUUCAUCAGAGUUUGGAGGACAAUAAUAGAUGUCCCAAGUGUAACUAUGUUGUGGACAAUAUUGACCAUCUGUAUCCUAAUUUCUUGGUGAAUGAACUCAUUCUUAAЖCAGAAGCAAAGAUUUGAGGAAAAGAGGUUCAAAUUGGACCACUCAAAUGGCCACAGGUGGCAGAUAUUUCAAGAUUGGUUGGGAACUGACCAAGAUAACCUUGAUUUGGCCAAUGUCAAUCUUAUGUUGGAGUUACUAGUGCAGAAGAAGAAACAACUGGAAGCAGAAUCACAUGCAGCCCAACUACAGAUUCUUAUGGAAUUCCUCAAGGUUGCAAGAAGAAAUAAGAGAGAGGAAAUGAGUGGCUUAUACUCUCCUGUCAGUGAGGAUAGCACAGUGCCUCAAUUUGAAGCUCCUUCUCCAUCACACAGUAGUAUUAUUGAUUCCACAGAAUACAGCCAACCUCCAGGUUUCAGUGGCAGUUCUCAGACAAAGAAЖCAGCCUUGGUAUAAUAGCACGUUAGCAUCAAGACGAAAACGACUUACUGCUCAUUUUGAAGACUUGGAGCAGUGUUACUUUUCUACAAGGAUGUCUCGUAUCUCAGAUGACAGUCGAЖCUGCAAGCCAGUUGGAUGAAUUUCAGGAAUGCUUGUCCAAGUUUACUCGAUAUAAUUCAGUACGACCUPUAGCCACAUUGUCAUAUGCUAGUGAUCUCUAUAAUGGUUCCAGUAUAGUCUCUAGUAUUGAAUPUGACCGGGAUUGUGACUAUUUUGCGAUUGCUGGAGUUACAAAGAAGAUUAAAGUCUAUGAAUAUGACACUGUCAUCCAGGAUGCAGUGGAUAUUCAUUACCCUGAGAAUGAAAUGACCUGCAAUUCGAAAAUCAGCUGUAUCAGUUGGAGUAGUUACCAUAAGAACCUGUUAGCUAGCAGUGAUUAUGAAGGCACUGUUAUUUUAUGGGAUGGAUUCACAGGACAGAGGUCAAAGGUCUAUCAGGAGCAUGAGAAGAGGUGUUGGAGUGUUGACUPUAAUUUGAUGGAUCCUAAACUCUUGGCUUCAGGUUCUGAUGAUGCAAAAGUGAAGCUGUGGUCUACCAAUCUAGACAACUCAGUGGCAAGCAUUGAGGCAAAGGCUAAUGUGUGCUGUGUUAAAUUCAGCCCCUCUUCCAGAUACCAUUUGGCUUUCGGCUGUGCAGAUCACUGUGUCCACUACUAUGAUCUUCGUAACACUAAЖCAGCCAAUCAUGGUAUUCAAAGGACACCGUAAAGCAGUCUCUUAUGCAAAGUUUGUGAGUGGUGAGGAAAUUGUCUCUGCCUCAACAGACAGUCAGCUAAAACUGUGGAAUGUAGGGAAACCAUACUGCCUACGUUCCUUCAAGGGUCAUAUCAAUGAAAAAAACUUUGUAGGCCUGGCUUCCAAUGGAGAUUAUAUAGCUUGUGGAAGUGAAAAUAACUCUCUCUACCUGUACUAUAAAGGACUUUCUAAGACUUUGCUAACUUUUAAGUUUGAUACAGUCAAAAGUGUUCUCGACAAAGACCGAAAAGAAGAUGAUACAAAUGAAUUUGUUAGUGCUGUGUGCUGGAGGGCACUACCAGAUGGGGAGUCCAAUGUGCUGAUUGCUGCUAACAGUCAGGGUACAAUUAAGGUGCUAGAAUUGGUAUGA
Sequence (SHORT NAMES ENCODING)	AUGUCUGGUAGCCGCCAGGCCGGGUCGGGCUCCGCUGGGACAAGCCCCGGGUCCUCGGCGGCCUCCUCGGUGACUUCCGCCUCCUCGUCUUUAUCCUCUUCCCCGUCGCCGCCUUCCGUGGCGGUUUCGGCGGCAGCGCUGGUGUCCGGCGGGGUGGCCCAGGCCGCCGGCUCGGGCGGCCUCGGGGGCCCGGUGCGGCCUGUGUUGGUGGCGCCCGCCGUAUCGGGUAGCGGCGGCGGGGCGGUGUCCACGGGCCUGUCCCGGCACAGCUGCGCGGCCAGGCCCAGCGCCGGCGUAGGAGGCAGCAGCUCCAGCCUAGGCAGCGGCAGCAGGAAGCGACCUCUCCUCGCCCCCCUCUGCAACGGGCUCAUCAACUCCUACGAGGACAAAAGCAACGACUUCGUAUGCCCCAUCUGCUUUGAUAUGAUUGAAGAAGCAUACAUGACAAAAUGUGGCCACAGCUUUUGCUACAAGUGUAUUCAUCAGAGUUUGGAGGACAAUAAUAGAUGUCCCAAGUGUAACUAUGUUGUGGACAAUAUUGACCAUCUGUAUCCUAAUUUCUUGGUGAAUGAACUCAUUCUUAAm6ACAGAAGCAAAGAUUUGAGGAAAAGAGGUUCAAAUUGGACCACUCAAAUGGCCACAGGUGGCAGAUAUUUCAAGAUUGGUUGGGAACUGACCAAGAUAACCUUGAUUUGGCCAAUGUCAAUCUUAUGUUGGAGUUACUAGUGCAGAAGAAGAAACAACUGGAAGCAGAAUCACAUGCAGCCCAACUACAGAUUCUUAUGGAAUUCCUCAAGGUUGCAAGAAGAAAUAAGAGAGAGGAAAUGAGUGGCUUAUACUCUCCUGUCAGUGAGGAUAGCACAGUGCCUCAAUUUGAAGCUCCUUCUCCAUCACACAGUAGUAUUAUUGAUUCCACAGAAUACAGCCAACCUCCAGGUUUCAGUGGCAGUUCUCAGACAAAGAAm6ACAGCCUUGGUAUAAUAGCACGUUAGCAUCAAGACGAAAACGACUUACUGCUCAUUUUGAAGACUUGGAGCAGUGUUACUUUUCUACAAGGAUGUCUCGUAUCUCAGAUGACAGUCGAm6ACUGCAAGCCAGUUGGAUGAAUUUCAGGAAUGCUUGUCCAAGUUUACUCGAUAUAAUUCAGUACGACCUYUAGCCACAUUGUCAUAUGCUAGUGAUCUCUAUAAUGGUUCCAGUAUAGUCUCUAGUAUUGAAUYUGACCGGGAUUGUGACUAUUUUGCGAUUGCUGGAGUUACAAAGAAGAUUAAAGUCUAUGAAUAUGACACUGUCAUCCAGGAUGCAGUGGAUAUUCAUUACCCUGAGAAUGAAAUGACCUGCAAUUCGAAAAUCAGCUGUAUCAGUUGGAGUAGUUACCAUAAGAACCUGUUAGCUAGCAGUGAUUAUGAAGGCACUGUUAUUUUAUGGGAUGGAUUCACAGGACAGAGGUCAAAGGUCUAUCAGGAGCAUGAGAAGAGGUGUUGGAGUGUUGACUYUAAUUUGAUGGAUCCUAAACUCUUGGCUUCAGGUUCUGAUGAUGCAAAAGUGAAGCUGUGGUCUACCAAUCUAGACAACUCAGUGGCAAGCAUUGAGGCAAAGGCUAAUGUGUGCUGUGUUAAAUUCAGCCCCUCUUCCAGAUACCAUUUGGCUUUCGGCUGUGCAGAUCACUGUGUCCACUACUAUGAUCUUCGUAACACUAAm6ACAGCCAAUCAUGGUAUUCAAAGGACACCGUAAAGCAGUCUCUUAUGCAAAGUUUGUGAGUGGUGAGGAAAUUGUCUCUGCCUCAACAGACAGUCAGCUAAAACUGUGGAAUGUAGGGAAACCAUACUGCCUACGUUCCUUCAAGGGUCAUAUCAAUGAAAAAAACUUUGUAGGCCUGGCUUCCAAUGGAGAUUAUAUAGCUUGUGGAAGUGAAAAUAACUCUCUCUACCUGUACUAUAAAGGACUUUCUAAGACUUUGCUAACUUUUAAGUUUGAUACAGUCAAAAGUGUUCUCGACAAAGACCGAAAAGAAGAUGAUACAAAUGAAUUUGUUAGUGCUGUGUGCUGGAGGGCACUACCAGAUGGGGAGUCCAAUGUGCUGAUUGCUGCUAACAGUCAGGGUACAAUUAAGGUGCUAGAAUUGGUAUGA
Sequence (MODOMICS CODE ENCODING)	AUGUCUGGUAGCCGCCAGGCCGGGUCGGGCUCCGCUGGGACAAGCCCCGGGUCCUCGGCGGCCUCCUCGGUGACUUCCGCCUCCUCGUCUUUAUCCUCUUCCCCGUCGCCGCCUUCCGUGGCGGUUUCGGCGGCAGCGCUGGUGUCCGGCGGGGUGGCCCAGGCCGCCGGCUCGGGCGGCCUCGGGGGCCCGGUGCGGCCUGUGUUGGUGGCGCCCGCCGUAUCGGGUAGCGGCGGCGGGGCGGUGUCCACGGGCCUGUCCCGGCACAGCUGCGCGGCCAGGCCCAGCGCCGGCGUAGGAGGCAGCAGCUCCAGCCUAGGCAGCGGCAGCAGGAAGCGACCUCUCCUCGCCCCCCUCUGCAACGGGCUCAUCAACUCCUACGAGGACAAAAGCAACGACUUCGUAUGCCCCAUCUGCUUUGAUAUGAUUGAAGAAGCAUACAUGACAAAAUGUGGCCACAGCUUUUGCUACAAGUGUAUUCAUCAGAGUUUGGAGGACAAUAAUAGAUGUCCCAAGUGUAACUAUGUUGUGGACAAUAUUGACCAUCUGUAUCCUAAUUUCUUGGUGAAUGAACUCAUUCUUAA2000000006ACAGAAGCAAAGAUUUGAGGAAAAGAGGUUCAAAUUGGACCACUCAAAUGGCCACAGGUGGCAGAUAUUUCAAGAUUGGUUGGGAACUGACCAAGAUAACCUUGAUUUGGCCAAUGUCAAUCUUAUGUUGGAGUUACUAGUGCAGAAGAAGAAACAACUGGAAGCAGAAUCACAUGCAGCCCAACUACAGAUUCUUAUGGAAUUCCUCAAGGUUGCAAGAAGAAAUAAGAGAGAGGAAAUGAGUGGCUUAUACUCUCCUGUCAGUGAGGAUAGCACAGUGCCUCAAUUUGAAGCUCCUUCUCCAUCACACAGUAGUAUUAUUGAUUCCACAGAAUACAGCCAACCUCCAGGUUUCAGUGGCAGUUCUCAGACAAAGAA2000000006ACAGCCUUGGUAUAAUAGCACGUUAGCAUCAAGACGAAAACGACUUACUGCUCAUUUUGAAGACUUGGAGCAGUGUUACUUUUCUACAAGGAUGUCUCGUAUCUCAGAUGACAGUCGA2000000006ACUGCAAGCCAGUUGGAUGAAUUUCAGGAAUGCUUGUCCAAGUUUACUCGAUAUAAUUCAGUACGACCU2000000009UUAGCCACAUUGUCAUAUGCUAGUGAUCUCUAUAAUGGUUCCAGUAUAGUCUCUAGUAUUGAAU2000000009UUGACCGGGAUUGUGACUAUUUUGCGAUUGCUGGAGUUACAAAGAAGAUUAAAGUCUAUGAAUAUGACACUGUCAUCCAGGAUGCAGUGGAUAUUCAUUACCCUGAGAAUGAAAUGACCUGCAAUUCGAAAAUCAGCUGUAUCAGUUGGAGUAGUUACCAUAAGAACCUGUUAGCUAGCAGUGAUUAUGAAGGCACUGUUAUUUUAUGGGAUGGAUUCACAGGACAGAGGUCAAAGGUCUAUCAGGAGCAUGAGAAGAGGUGUUGGAGUGUUGACU2000000009UUAAUUUGAUGGAUCCUAAACUCUUGGCUUCAGGUUCUGAUGAUGCAAAAGUGAAGCUGUGGUCUACCAAUCUAGACAACUCAGUGGCAAGCAUUGAGGCAAAGGCUAAUGUGUGCUGUGUUAAAUUCAGCCCCUCUUCCAGAUACCAUUUGGCUUUCGGCUGUGCAGAUCACUGUGUCCACUACUAUGAUCUUCGUAACACUAA2000000006ACAGCCAAUCAUGGUAUUCAAAGGACACCGUAAAGCAGUCUCUUAUGCAAAGUUUGUGAGUGGUGAGGAAAUUGUCUCUGCCUCAACAGACAGUCAGCUAAAACUGUGGAAUGUAGGGAAACCAUACUGCCUACGUUCCUUCAAGGGUCAUAUCAAUGAAAAAAACUUUGUAGGCCUGGCUUCCAAUGGAGAUUAUAUAGCUUGUGGAAGUGAAAAUAACUCUCUCUACCUGUACUAUAAAGGACUUUCUAAGACUUUGCUAACUUUUAAGUUUGAUACAGUCAAAAGUGUUCUCGACAAAGACCGAAAAGAAGAUGAUACAAAUGAAUUUGUUAGUGCUGUGUGCUGGAGGGCACUACCAGAUGGGGAGUCCAAUGUGCUGAUUGCUGCUAACAGUCAGGGUACAAUUAAGGUGCUAGAAUUGGUAUGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	585	963	1081	1150	1214	1490	1695
Modification Positions	m6A	m6A	m6A	Y	Y	Y	m6A
Genomic Coordinates	1:176163872:-	1:176085882:-	1:176081276:-	1:176081207:-	1:176046316:-	1:176043236:-	1:175989442:-
Level of Experimental Evidence	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8