General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000367441
Gene ID:	ENSG00000116747
Gene Name:	RO60
Sequence (UNICHARACTER ENCODING)	AUUUUGCCUUUUUGUUAGGUUUCCUAAAGACAAAAAAAAAUGGAGGAAUCUGUAAACCAAAUGCAGCCACUGAAUGAGAAGCAGAUAGCCAAUUCUCAGGAUGGAUAUGUAUGGCAAGUCACUGACAUGAAUCGACUACACCGGUUCUUAUGUUUCGGUUCUGAAGGUGGGЖCUUAUUAUAUCAAAGAACAGAAGUUGGGCCUUGAAAAUGCUGAAGCUUUAAUUAGAUUGAUUGAAGAUGGCAGAGGAUGUGAAGUGAUACAAGAAAUAAAGUCAUUUAGUCAAGAAGGCAGAACCACAAAGCAAGAGCCUAUGCUCUUUGCACUUGCCAUUUGUUCCCAGUGCUCCGACAUAAGCACAAAACAAGCAGCAUUUAAAGCUGUUUCUGAAGUUUGUCGCAUUCCUACCCAUCUCUUUACUUUUAUCCAGUUUAAGAAAGAUCUGAAGGAAAGCAUGAAAUGUGGCAUGUGGGGUCGUGCCCUCCGGAAGGCUAUAGCGGЖCUGGUACAAUGAGAAAGGUGGCAUGGCCCUUGCUCUGGCAGUUACAAAAUAUAAACAGAGAAAUGGCUGGUCUCACAAAGAUCUAUUAAGAUUGUCACAUCUUAAACCUUCCAGUGAAGGACUUGCAAUUGUGACCAAAUAUAUUACAAAGGGCUGGAAAGAAGUUCAUGAAUUGUAUAAAGAAAAAGCACUCUCUGUGGAGACUGAAAAAUUAUUAAAGUAUCUGGAGGCUGUAGAGAAAGUGAAGCGCACAAGAGAUGAGCUAGAAGUCAUUCAUCUAAUAGAAGAACAUAGAUUAGUUAGAGAACAUCUUUUAACAAAUCACUUAAAGUCUAAAGAGGUAUGGAAGGCUUUGUUACAAGAAAUGCCGCUUACUGCAUUACUAAGGAAUCUAGGAAAGAUGACUGCUAAUUCAGUACUUGAACCAGGAAAUUCAGAAGUAUCUUUAGUAUGUGAAAAACUGUGUAAUGAAAAACUAUUAAAAAAGGCUCGUAUACAUCCAUUUCAUAUUUUGAUCGCAUUAGAAACUUACAAGACAGGUCAUGGUCUCAGAGGGAAACUGAAGUGGCGCCCUGAUGAAGAAAUUUUGAAAGCAUUGGAUGCUGCUUUUUAUAAAACAUUUAAGACAGUUGAACCAACUGGAAAACGUUUCUUACUAGCUGUUGAUGUCAGUGCUUCUAUGAACCAAAGAGUUUUGGGUAGUAUACUCAACGCUAGUACAGUUGCUGCAGCAAUGUGCAUGGUUGUCACACGAACAGAAAAAGAUUCUUAUGUAGUUGCUUUUUCCGAUGAAAUGGUACCAUGUCCAGUGACUACAGAUAUGACCUUACAACAGGUUUUAAUGGCUAUGAGUCAGAUCCCAGCAGGUGGAACUGAUUGCUCUCUUCCAAUGAUCUGGGCUCAGAAGACAAACACACCUGCUGAUGUCUUCAUUGUAUUCACUGAUAAUGAGACCUUUGCUGGAGGUGUCCAPCCUGCUAUUGCUCUGAGGGAGUAUCGAAAGAAAAUGGAUAUUCCAGCUAAAUUGAUUGUUUGUGGAAUGACAUCAAAUGGUUUCACCAUUGCAGЖCCCAGAUGAUAGAGGCAUGUUGGAUAUGUGCGGCUUUGAUACUGGAGCUCUGGAUGUAAUUCGAAAUUUCACAUUAGAUAUGAUUUAACCAUAAGCAGCAGCACGAUCCAGAGAUCCAUUGCCAUCAGUGAUCUCACUAAAAAUAUACAGCUACUUCCCAGCUAAUCUCCACCCAAUGAAUGAUGAUGGUAUAGUAUGUGCAUAAUGGAAAGUUACCUUACUG
Sequence (SHORT NAMES ENCODING)	AUUUUGCCUUUUUGUUAGGUUUCCUAAAGACAAAAAAAAAUGGAGGAAUCUGUAAACCAAAUGCAGCCACUGAAUGAGAAGCAGAUAGCCAAUUCUCAGGAUGGAUAUGUAUGGCAAGUCACUGACAUGAAUCGACUACACCGGUUCUUAUGUUUCGGUUCUGAAGGUGGGm6ACUUAUUAUAUCAAAGAACAGAAGUUGGGCCUUGAAAAUGCUGAAGCUUUAAUUAGAUUGAUUGAAGAUGGCAGAGGAUGUGAAGUGAUACAAGAAAUAAAGUCAUUUAGUCAAGAAGGCAGAACCACAAAGCAAGAGCCUAUGCUCUUUGCACUUGCCAUUUGUUCCCAGUGCUCCGACAUAAGCACAAAACAAGCAGCAUUUAAAGCUGUUUCUGAAGUUUGUCGCAUUCCUACCCAUCUCUUUACUUUUAUCCAGUUUAAGAAAGAUCUGAAGGAAAGCAUGAAAUGUGGCAUGUGGGGUCGUGCCCUCCGGAAGGCUAUAGCGGm6ACUGGUACAAUGAGAAAGGUGGCAUGGCCCUUGCUCUGGCAGUUACAAAAUAUAAACAGAGAAAUGGCUGGUCUCACAAAGAUCUAUUAAGAUUGUCACAUCUUAAACCUUCCAGUGAAGGACUUGCAAUUGUGACCAAAUAUAUUACAAAGGGCUGGAAAGAAGUUCAUGAAUUGUAUAAAGAAAAAGCACUCUCUGUGGAGACUGAAAAAUUAUUAAAGUAUCUGGAGGCUGUAGAGAAAGUGAAGCGCACAAGAGAUGAGCUAGAAGUCAUUCAUCUAAUAGAAGAACAUAGAUUAGUUAGAGAACAUCUUUUAACAAAUCACUUAAAGUCUAAAGAGGUAUGGAAGGCUUUGUUACAAGAAAUGCCGCUUACUGCAUUACUAAGGAAUCUAGGAAAGAUGACUGCUAAUUCAGUACUUGAACCAGGAAAUUCAGAAGUAUCUUUAGUAUGUGAAAAACUGUGUAAUGAAAAACUAUUAAAAAAGGCUCGUAUACAUCCAUUUCAUAUUUUGAUCGCAUUAGAAACUUACAAGACAGGUCAUGGUCUCAGAGGGAAACUGAAGUGGCGCCCUGAUGAAGAAAUUUUGAAAGCAUUGGAUGCUGCUUUUUAUAAAACAUUUAAGACAGUUGAACCAACUGGAAAACGUUUCUUACUAGCUGUUGAUGUCAGUGCUUCUAUGAACCAAAGAGUUUUGGGUAGUAUACUCAACGCUAGUACAGUUGCUGCAGCAAUGUGCAUGGUUGUCACACGAACAGAAAAAGAUUCUUAUGUAGUUGCUUUUUCCGAUGAAAUGGUACCAUGUCCAGUGACUACAGAUAUGACCUUACAACAGGUUUUAAUGGCUAUGAGUCAGAUCCCAGCAGGUGGAACUGAUUGCUCUCUUCCAAUGAUCUGGGCUCAGAAGACAAACACACCUGCUGAUGUCUUCAUUGUAUUCACUGAUAAUGAGACCUUUGCUGGAGGUGUCCAYCCUGCUAUUGCUCUGAGGGAGUAUCGAAAGAAAAUGGAUAUUCCAGCUAAAUUGAUUGUUUGUGGAAUGACAUCAAAUGGUUUCACCAUUGCAGm6ACCCAGAUGAUAGAGGCAUGUUGGAUAUGUGCGGCUUUGAUACUGGAGCUCUGGAUGUAAUUCGAAAUUUCACAUUAGAUAUGAUUUAACCAUAAGCAGCAGCACGAUCCAGAGAUCCAUUGCCAUCAGUGAUCUCACUAAAAAUAUACAGCUACUUCCCAGCUAAUCUCCACCCAAUGAAUGAUGAUGGUAUAGUAUGUGCAUAAUGGAAAGUUACCUUACUG
Sequence (MODOMICS CODE ENCODING)	AUUUUGCCUUUUUGUUAGGUUUCCUAAAGACAAAAAAAAAUGGAGGAAUCUGUAAACCAAAUGCAGCCACUGAAUGAGAAGCAGAUAGCCAAUUCUCAGGAUGGAUAUGUAUGGCAAGUCACUGACAUGAAUCGACUACACCGGUUCUUAUGUUUCGGUUCUGAAGGUGGG2000000006ACUUAUUAUAUCAAAGAACAGAAGUUGGGCCUUGAAAAUGCUGAAGCUUUAAUUAGAUUGAUUGAAGAUGGCAGAGGAUGUGAAGUGAUACAAGAAAUAAAGUCAUUUAGUCAAGAAGGCAGAACCACAAAGCAAGAGCCUAUGCUCUUUGCACUUGCCAUUUGUUCCCAGUGCUCCGACAUAAGCACAAAACAAGCAGCAUUUAAAGCUGUUUCUGAAGUUUGUCGCAUUCCUACCCAUCUCUUUACUUUUAUCCAGUUUAAGAAAGAUCUGAAGGAAAGCAUGAAAUGUGGCAUGUGGGGUCGUGCCCUCCGGAAGGCUAUAGCGG2000000006ACUGGUACAAUGAGAAAGGUGGCAUGGCCCUUGCUCUGGCAGUUACAAAAUAUAAACAGAGAAAUGGCUGGUCUCACAAAGAUCUAUUAAGAUUGUCACAUCUUAAACCUUCCAGUGAAGGACUUGCAAUUGUGACCAAAUAUAUUACAAAGGGCUGGAAAGAAGUUCAUGAAUUGUAUAAAGAAAAAGCACUCUCUGUGGAGACUGAAAAAUUAUUAAAGUAUCUGGAGGCUGUAGAGAAAGUGAAGCGCACAAGAGAUGAGCUAGAAGUCAUUCAUCUAAUAGAAGAACAUAGAUUAGUUAGAGAACAUCUUUUAACAAAUCACUUAAAGUCUAAAGAGGUAUGGAAGGCUUUGUUACAAGAAAUGCCGCUUACUGCAUUACUAAGGAAUCUAGGAAAGAUGACUGCUAAUUCAGUACUUGAACCAGGAAAUUCAGAAGUAUCUUUAGUAUGUGAAAAACUGUGUAAUGAAAAACUAUUAAAAAAGGCUCGUAUACAUCCAUUUCAUAUUUUGAUCGCAUUAGAAACUUACAAGACAGGUCAUGGUCUCAGAGGGAAACUGAAGUGGCGCCCUGAUGAAGAAAUUUUGAAAGCAUUGGAUGCUGCUUUUUAUAAAACAUUUAAGACAGUUGAACCAACUGGAAAACGUUUCUUACUAGCUGUUGAUGUCAGUGCUUCUAUGAACCAAAGAGUUUUGGGUAGUAUACUCAACGCUAGUACAGUUGCUGCAGCAAUGUGCAUGGUUGUCACACGAACAGAAAAAGAUUCUUAUGUAGUUGCUUUUUCCGAUGAAAUGGUACCAUGUCCAGUGACUACAGAUAUGACCUUACAACAGGUUUUAAUGGCUAUGAGUCAGAUCCCAGCAGGUGGAACUGAUUGCUCUCUUCCAAUGAUCUGGGCUCAGAAGACAAACACACCUGCUGAUGUCUUCAUUGUAUUCACUGAUAAUGAGACCUUUGCUGGAGGUGUCCA2000000009UCCUGCUAUUGCUCUGAGGGAGUAUCGAAAGAAAAUGGAUAUUCCAGCUAAAUUGAUUGUUUGUGGAAUGACAUCAAAUGGUUUCACCAUUGCAG2000000006ACCCAGAUGAUAGAGGCAUGUUGGAUAUGUGCGGCUUUGAUACUGGAGCUCUGGAUGUAAUUCGAAAUUUCACAUUAGAUAUGAUUUAACCAUAAGCAGCAGCACGAUCCAGAGAUCCAUUGCCAUCAGUGAUCUCACUAAAAAUAUACAGCUACUUCCCAGCUAAUCUCCACCCAAUGAAUGAUGAUGGUAUAGUAUGUGCAUAAUGGAAAGUUACCUUACUG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	172	500	1473	1568
Modification Positions	m6A	m6A	Y	m6A
Genomic Coordinates	1:193069187:+	1:193069515:+	1:193082678:+	1:193084643:+
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML	3TeAZFYFxgvp 5FhTyQVy2tKW 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe Q36pf44ZRvxu QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	8cMbzB4aD5Se ArijeGVTwYBw WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8