General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000445551
Gene ID:	ENSG00000237424
Gene Name:	FOXD2-AS1
Sequence (UNICHARACTER ENCODING)	CCUGUUCGGCGUCUUGCAGCAGUGCCUGCGAUCCCGCGUGAGUCCGUCGCUCCCUCCGCGAAAACCUGGЖCUCUUUCCCAGAAGCCUUGGGCUCCAGCACCAUGCCUGCUGCAGCCGCCAAAGAGCGGGAAGCCACAGGCUCUGCGGGUCUUGGUUACAGCGUCUCUGGUCGUGCCGGGCCUCCUUCUGCAUCUGUUCCACGGCCCGGCCAUCUCCCUCGUGCAGCCCAGAЖCAAUUGGGAGGAAGCGUUGGCGGGCGGAGGGGGAUGCCUGUUGGGCUUUUCCACUAGUUACUGAGUGUUUUUUGCGAAGAGUACGUUGCUAUCAGUGGCGUCCGGGUCGUCUCUCCCUCUCUUCCUUUUGGUCCCCAUAAAUGAGCUGUUCUCGGCUCUGGGAAAGAAAAGCCCUCCAGCGAUUAUGCGGAUCUAAUUAAGUCAAUCAGGAAACUGCCGGAGAGCGGCACUGGCUUGAAGCGGAGUUUGUCCUGAGGCACAGCGGAACGAUUGCACGCGGCCCUUUUCAGCGGUUCGAGCUCGGCCAGCGCCGGGCUGCAAACGGAAGCCUGAGCUGGGCUUGGGGAACUACGCCCGCAGAUUUCUCUAAUUUUAUUCACAAAЖCUGGЖCACCCUCAGGGAAAGCGGCAAAGCCGGCGCGAGCCUCCUUCCCACUCUGGЖCCUAGCUGCAGCUCCAAAGCGAGAUAGCUGUCUAGCCUCAGCCGGUACAGCUCCCGGCCCCUUUCUCCACCCGGAUCUUCGGCUGCUCAGAAGCGAUCAGCUCCCUUAGCCCAGGUGGGAGGCGGGAGACUCCAGAUCCUGUGACCCGCGGAGGCAGACCUCAGACAUGUUCCCCAUGCACAGAAAUGЖCUGGGGCUCCAGUGUGUGCACCUUCAACUCUGAAGCCCACCUGCCCACUUCAGGCGCUGGCGCGGAGAUAACCACCACGCGUCUGCCGGGCAAAGUUCGAGAGUGAAUUUACAUCUUCUCUUUCCGCUACUCCUGGCCACUGUCCCCUCCCAGCCCCAUCUCCCCCGCCCCCAACCCUGGЖCUAUGUGGUAGGGGЖCUCGCUUAAGCACCCAAGUЖCUGCGCGGUUGUUGAGACCAAGGCGAGCUGCGGAGCCUGUGGGCUGUUGUUCGUGGGAAGAGGGUUGCGACCUCAGGAGAGACCGAAAACAGCGCCACUUGAAACCCGCCGGUCCUGAAGAUCACAGAGUUCCCGGAGUGGUAGGGAAGGCUCCACGCUCUUGAGAGCAGAGGCGGCCAGGGGCAGUGGGGGЖCGCUUCCAGGUAUGUGGGAAGGAGAЖCUUCAUGUCUAAGUGCGCUCUUGUGGGUUUCUCGGCCAGCUGGGCCGAGCCUCUCUUUCUCUGUCCUCAUGUGUCUGUCCUCUGGACAACAGUGGCUCUGUAUGGCGGAUUGCGACCCUGAGUGACGGGCGCCUGUCUUGCAUCCUGUGUCCUGUGUCCUCCCCUCCAGACCUCAUGCUUGGUGUCCACAGAGUGGACCCAGGЖCUGCCUGGAAGGCUUAUCAUCCAGGCCCGCGACUUCCCCCCAGAGUCUGAAGCCUUGCGACCUGGUCGGGGACGACAAACCUGCUCGGGGUCAACAGCGAGACCCUAGUGGGGAAUGAGGAUGGGUGAGGGUGCGCCUGGGUUGAGGGUCUGUGЖCUGUAGCAUGGAAAAGGAGUUCAUGCAGGGAUCGCACUGAGGGACAGCCAAGAAUACUCCAGCGGCAGCCUCCCUCCUACCAAUUACACGCCGCCUGCUGGCACAGUGGCACCUCGGGAACAGGACGCCCUUCCGGGCCCUGAAUUGGGGCAGCGCAGGAGGGAGGGUGCAGAGCCAUAGCGACCUGUGUGUACCAUAGACAUGCACAUGCGCUCACCUUCACGUGUAACCCUUCUGAGUCCCAGACAGGGUAACUGGCGAGGCCGUAAGUACCCUCGUGGGGGCGGAAAUAUUGCCGCGUCCCUGAGUCCUCUGGGCAGAUGCAGAGCCGCGUAAGCCUCAUAGAAGCAAAGCCAGGGGAACAGUGGGAGCUCUGGCCUCGCGGUGCGGACGCUAGUAAUGGAUUCCUGGGGAACAGCGACCUCUGGAGGAGCCUCUCAUCCACACAGAGUCAGGAACUAAAGGЖCUGGUUCUGAGACAAAGCACCCUUUCCUCACCCUACUCCCAUUCCACCCGCUUGGAAAAGUUAUCCAGAGЖCUUUUAACCUCCGGЖCUCCACUCUUCGCUUAUGUUUGCUUUUUUUUCCAACCUGUACCCACGCUUCAAAAUCCCUGCUCCAGUCCUGCCUCUUCCAGAAAGAAGCCUUCUGGCCAGCCCAGUUCCUCUUCCCCUCUUCCUGUUCUGAGCUCAUUCUCAGGCCACACUGCACAGCCAACCUGCUUCCUGCCUGCUCUUCUCCAAAAAGЖCUGUGAAUCCACUCCACCCACGCCUUGUGUUGCAUGCUGGGCAUGCCGUUCCCUGCCCCAACCCACCCCACCCCCCAGUGAAUAAAGACUGAAGUUAUUCAUUCCAAAA
Sequence (SHORT NAMES ENCODING)	CCUGUUCGGCGUCUUGCAGCAGUGCCUGCGAUCCCGCGUGAGUCCGUCGCUCCCUCCGCGAAAACCUGGm6ACUCUUUCCCAGAAGCCUUGGGCUCCAGCACCAUGCCUGCUGCAGCCGCCAAAGAGCGGGAAGCCACAGGCUCUGCGGGUCUUGGUUACAGCGUCUCUGGUCGUGCCGGGCCUCCUUCUGCAUCUGUUCCACGGCCCGGCCAUCUCCCUCGUGCAGCCCAGAm6ACAAUUGGGAGGAAGCGUUGGCGGGCGGAGGGGGAUGCCUGUUGGGCUUUUCCACUAGUUACUGAGUGUUUUUUGCGAAGAGUACGUUGCUAUCAGUGGCGUCCGGGUCGUCUCUCCCUCUCUUCCUUUUGGUCCCCAUAAAUGAGCUGUUCUCGGCUCUGGGAAAGAAAAGCCCUCCAGCGAUUAUGCGGAUCUAAUUAAGUCAAUCAGGAAACUGCCGGAGAGCGGCACUGGCUUGAAGCGGAGUUUGUCCUGAGGCACAGCGGAACGAUUGCACGCGGCCCUUUUCAGCGGUUCGAGCUCGGCCAGCGCCGGGCUGCAAACGGAAGCCUGAGCUGGGCUUGGGGAACUACGCCCGCAGAUUUCUCUAAUUUUAUUCACAAAm6ACUGGm6ACACCCUCAGGGAAAGCGGCAAAGCCGGCGCGAGCCUCCUUCCCACUCUGGm6ACCUAGCUGCAGCUCCAAAGCGAGAUAGCUGUCUAGCCUCAGCCGGUACAGCUCCCGGCCCCUUUCUCCACCCGGAUCUUCGGCUGCUCAGAAGCGAUCAGCUCCCUUAGCCCAGGUGGGAGGCGGGAGACUCCAGAUCCUGUGACCCGCGGAGGCAGACCUCAGACAUGUUCCCCAUGCACAGAAAUGm6ACUGGGGCUCCAGUGUGUGCACCUUCAACUCUGAAGCCCACCUGCCCACUUCAGGCGCUGGCGCGGAGAUAACCACCACGCGUCUGCCGGGCAAAGUUCGAGAGUGAAUUUACAUCUUCUCUUUCCGCUACUCCUGGCCACUGUCCCCUCCCAGCCCCAUCUCCCCCGCCCCCAACCCUGGm6ACUAUGUGGUAGGGGm6ACUCGCUUAAGCACCCAAGUm6ACUGCGCGGUUGUUGAGACCAAGGCGAGCUGCGGAGCCUGUGGGCUGUUGUUCGUGGGAAGAGGGUUGCGACCUCAGGAGAGACCGAAAACAGCGCCACUUGAAACCCGCCGGUCCUGAAGAUCACAGAGUUCCCGGAGUGGUAGGGAAGGCUCCACGCUCUUGAGAGCAGAGGCGGCCAGGGGCAGUGGGGGm6ACGCUUCCAGGUAUGUGGGAAGGAGAm6ACUUCAUGUCUAAGUGCGCUCUUGUGGGUUUCUCGGCCAGCUGGGCCGAGCCUCUCUUUCUCUGUCCUCAUGUGUCUGUCCUCUGGACAACAGUGGCUCUGUAUGGCGGAUUGCGACCCUGAGUGACGGGCGCCUGUCUUGCAUCCUGUGUCCUGUGUCCUCCCCUCCAGACCUCAUGCUUGGUGUCCACAGAGUGGACCCAGGm6ACUGCCUGGAAGGCUUAUCAUCCAGGCCCGCGACUUCCCCCCAGAGUCUGAAGCCUUGCGACCUGGUCGGGGACGACAAACCUGCUCGGGGUCAACAGCGAGACCCUAGUGGGGAAUGAGGAUGGGUGAGGGUGCGCCUGGGUUGAGGGUCUGUGm6ACUGUAGCAUGGAAAAGGAGUUCAUGCAGGGAUCGCACUGAGGGACAGCCAAGAAUACUCCAGCGGCAGCCUCCCUCCUACCAAUUACACGCCGCCUGCUGGCACAGUGGCACCUCGGGAACAGGACGCCCUUCCGGGCCCUGAAUUGGGGCAGCGCAGGAGGGAGGGUGCAGAGCCAUAGCGACCUGUGUGUACCAUAGACAUGCACAUGCGCUCACCUUCACGUGUAACCCUUCUGAGUCCCAGACAGGGUAACUGGCGAGGCCGUAAGUACCCUCGUGGGGGCGGAAAUAUUGCCGCGUCCCUGAGUCCUCUGGGCAGAUGCAGAGCCGCGUAAGCCUCAUAGAAGCAAAGCCAGGGGAACAGUGGGAGCUCUGGCCUCGCGGUGCGGACGCUAGUAAUGGAUUCCUGGGGAACAGCGACCUCUGGAGGAGCCUCUCAUCCACACAGAGUCAGGAACUAAAGGm6ACUGGUUCUGAGACAAAGCACCCUUUCCUCACCCUACUCCCAUUCCACCCGCUUGGAAAAGUUAUCCAGAGm6ACUUUUAACCUCCGGm6ACUCCACUCUUCGCUUAUGUUUGCUUUUUUUUCCAACCUGUACCCACGCUUCAAAAUCCCUGCUCCAGUCCUGCCUCUUCCAGAAAGAAGCCUUCUGGCCAGCCCAGUUCCUCUUCCCCUCUUCCUGUUCUGAGCUCAUUCUCAGGCCACACUGCACAGCCAACCUGCUUCCUGCCUGCUCUUCUCCAAAAAGm6ACUGUGAAUCCACUCCACCCACGCCUUGUGUUGCAUGCUGGGCAUGCCGUUCCCUGCCCCAACCCACCCCACCCCCCAGUGAAUAAAGACUGAAGUUAUUCAUUCCAAAA
Sequence (MODOMICS CODE ENCODING)	CCUGUUCGGCGUCUUGCAGCAGUGCCUGCGAUCCCGCGUGAGUCCGUCGCUCCCUCCGCGAAAACCUGG2000000006ACUCUUUCCCAGAAGCCUUGGGCUCCAGCACCAUGCCUGCUGCAGCCGCCAAAGAGCGGGAAGCCACAGGCUCUGCGGGUCUUGGUUACAGCGUCUCUGGUCGUGCCGGGCCUCCUUCUGCAUCUGUUCCACGGCCCGGCCAUCUCCCUCGUGCAGCCCAGA2000000006ACAAUUGGGAGGAAGCGUUGGCGGGCGGAGGGGGAUGCCUGUUGGGCUUUUCCACUAGUUACUGAGUGUUUUUUGCGAAGAGUACGUUGCUAUCAGUGGCGUCCGGGUCGUCUCUCCCUCUCUUCCUUUUGGUCCCCAUAAAUGAGCUGUUCUCGGCUCUGGGAAAGAAAAGCCCUCCAGCGAUUAUGCGGAUCUAAUUAAGUCAAUCAGGAAACUGCCGGAGAGCGGCACUGGCUUGAAGCGGAGUUUGUCCUGAGGCACAGCGGAACGAUUGCACGCGGCCCUUUUCAGCGGUUCGAGCUCGGCCAGCGCCGGGCUGCAAACGGAAGCCUGAGCUGGGCUUGGGGAACUACGCCCGCAGAUUUCUCUAAUUUUAUUCACAAA2000000006ACUGG2000000006ACACCCUCAGGGAAAGCGGCAAAGCCGGCGCGAGCCUCCUUCCCACUCUGG2000000006ACCUAGCUGCAGCUCCAAAGCGAGAUAGCUGUCUAGCCUCAGCCGGUACAGCUCCCGGCCCCUUUCUCCACCCGGAUCUUCGGCUGCUCAGAAGCGAUCAGCUCCCUUAGCCCAGGUGGGAGGCGGGAGACUCCAGAUCCUGUGACCCGCGGAGGCAGACCUCAGACAUGUUCCCCAUGCACAGAAAUG2000000006ACUGGGGCUCCAGUGUGUGCACCUUCAACUCUGAAGCCCACCUGCCCACUUCAGGCGCUGGCGCGGAGAUAACCACCACGCGUCUGCCGGGCAAAGUUCGAGAGUGAAUUUACAUCUUCUCUUUCCGCUACUCCUGGCCACUGUCCCCUCCCAGCCCCAUCUCCCCCGCCCCCAACCCUGG2000000006ACUAUGUGGUAGGGG2000000006ACUCGCUUAAGCACCCAAGU2000000006ACUGCGCGGUUGUUGAGACCAAGGCGAGCUGCGGAGCCUGUGGGCUGUUGUUCGUGGGAAGAGGGUUGCGACCUCAGGAGAGACCGAAAACAGCGCCACUUGAAACCCGCCGGUCCUGAAGAUCACAGAGUUCCCGGAGUGGUAGGGAAGGCUCCACGCUCUUGAGAGCAGAGGCGGCCAGGGGCAGUGGGGG2000000006ACGCUUCCAGGUAUGUGGGAAGGAGA2000000006ACUUCAUGUCUAAGUGCGCUCUUGUGGGUUUCUCGGCCAGCUGGGCCGAGCCUCUCUUUCUCUGUCCUCAUGUGUCUGUCCUCUGGACAACAGUGGCUCUGUAUGGCGGAUUGCGACCCUGAGUGACGGGCGCCUGUCUUGCAUCCUGUGUCCUGUGUCCUCCCCUCCAGACCUCAUGCUUGGUGUCCACAGAGUGGACCCAGG2000000006ACUGCCUGGAAGGCUUAUCAUCCAGGCCCGCGACUUCCCCCCAGAGUCUGAAGCCUUGCGACCUGGUCGGGGACGACAAACCUGCUCGGGGUCAACAGCGAGACCCUAGUGGGGAAUGAGGAUGGGUGAGGGUGCGCCUGGGUUGAGGGUCUGUG2000000006ACUGUAGCAUGGAAAAGGAGUUCAUGCAGGGAUCGCACUGAGGGACAGCCAAGAAUACUCCAGCGGCAGCCUCCCUCCUACCAAUUACACGCCGCCUGCUGGCACAGUGGCACCUCGGGAACAGGACGCCCUUCCGGGCCCUGAAUUGGGGCAGCGCAGGAGGGAGGGUGCAGAGCCAUAGCGACCUGUGUGUACCAUAGACAUGCACAUGCGCUCACCUUCACGUGUAACCCUUCUGAGUCCCAGACAGGGUAACUGGCGAGGCCGUAAGUACCCUCGUGGGGGCGGAAAUAUUGCCGCGUCCCUGAGUCCUCUGGGCAGAUGCAGAGCCGCGUAAGCCUCAUAGAAGCAAAGCCAGGGGAACAGUGGGAGCUCUGGCCUCGCGGUGCGGACGCUAGUAAUGGAUUCCUGGGGAACAGCGACCUCUGGAGGAGCCUCUCAUCCACACAGAGUCAGGAACUAAAGG2000000006ACUGGUUCUGAGACAAAGCACCCUUUCCUCACCCUACUCCCAUUCCACCCGCUUGGAAAAGUUAUCCAGAG2000000006ACUUUUAACCUCCGG2000000006ACUCCACUCUUCGCUUAUGUUUGCUUUUUUUUCCAACCUGUACCCACGCUUCAAAAUCCCUGCUCCAGUCCUGCCUCUUCCAGAAAGAAGCCUUCUGGCCAGCCCAGUUCCUCUUCCCCUCUUCCUGUUCUGAGCUCAUUCUCAGGCCACACUGCACAGCCAACCUGCUUCCUGCCUGCUCUUCUCCAAAAAG2000000006ACUGUGAAUCCACUCCACCCACGCCUUGUGUUGCAUGCUGGGCAUGCCGUUCCCUGCCCCAACCCACCCCACCCCCCAGUGAAUAAAGACUGAAGUUAUUCAUUCCAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	70	232	616	621	672	861	1042	1057	1077	1270	1296	1500	1655	2121	2192	2207	2400
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	1:47434572:-	1:47434410:-	1:47434026:-	1:47434021:-	1:47433970:-	1:47433781:-	1:47433600:-	1:47433585:-	1:47433565:-	1:47433372:-	1:47433346:-	1:47433142:-	1:47432987:-	1:47432521:-	1:47432450:-	1:47432435:-	1:47432242:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	5FhTyQVy2tKW jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL	msuJfBpJvM5H VyCX26p5UBRL	5Nnepx5V7yHo msuJfBpJvM5H VyCX26p5UBRL	5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	5FhTyQVy2tKW 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn	5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL	Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL	6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL	5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL BkoLW2CBToyL	4HMi5ykupT9V 5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL	5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL