General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000377036
Gene ID:	ENSG00000160049
Gene Name:	DFFA
Sequence (UNICHARACTER ENCODING)	CGAAGGUGGGCAGGUCCCACCUUGUGGAGGAUGGAGGUGACCGGGGACGCCGGGGUACCAGAAUCUGGCGAGAUCCGGACUCUAAAGCCGUGUCUGCUGCGCCGCAACUACAGCCGCGAЖCAGCACGGCGUGGCCGCCUCCUGCCUCGAAGACCUGAGGAGCAAGGCCUGUGACAUUCUGGCCAUUGAUAAGUCCCUGACACCAGUCACCCUGGUCCUGGCAGAGGAUGGCACCAUAGUGGAUGAUGACGAUUACUUUCUGUGUCUACCUUCCAAUACUAAGUUUGUGGCAUUGGCUAGUAAUGAGAAAUGGGCAUACAACAAUUCAGAUGGAGGUACAGCUUGGAUUUCCCAAGAGUCCUUUGAUGUAGAUGAAЖCAGACAGCGGGGCAGGGUUGAAGUGGAAGAAUGUGGCCAGGCAGCUGAAAGAAGAUCUGUCCAGCAUCAPCCUCCUAUCAGAGGAGGACCUCCAGAUGCUUGUUGACGCUCCCUGCUCAGACCUGGCUCAGGAACUACGUCAGAGUUGUGCCACCGUCCAGCGGCUGCAGCACACACUCCAACAGGUGCUUGACCAAAGAGAGGAAGUGCGUCAGUCCAAGCAGCUCCUGCAGCUGUACCUCCAGGCUUUGGAGAAAGAGGGCAGCCUCUUGUCAAAGCAGGAAGAGUCCAAAGCUGCCUUUGGUGAGGAGGUGGAUGCAGUAGACACGGGUAUCAGCAGAGAGACCUCCUCGGACGUUGCGCUGGCGAGCCACAPCCUUACUGCACUGAGGGAGAAGCAGGCUCCAGAGCUGAGCUUAUCUAGUCAGGAUPUGGAGGUGGGCGGAAACCAGGGUCACUGAGCUACAGAGGAGGЖCAUGCCCUGGGAUGUAGUAGUAUCAUGCAGAGGUGUGUGGGCCCUUUUGUUCACCUCUGCAGЖCUGUGAAUCCUAGCUGCCAGUUUGCCUAUUAUAUGCCAAGGCAUUUGCAAAAAUCUCAUUAAUCUAAAUCAAAAUAGCUPUAAAGAAAAAUGCAUACACUUCCUCAGAUCAUCAAACAGЖCUCUGGUCCAAGGUUGGUAAUGAAAUGЖCUGUUCCUGACAGGGAGGAAUAGCAGGGCCCAAUCUUCUGAGAUGGCUUCUGGGUCUUUCCAUGGUCAGAGAAGAUCUAUAGUCCGUCCUGAGGUCUGUCAAUGUCACAGGAAAAGGCAAACUUGAGGGGAUCGUCGCCUGCUGGCUAAGACCAGGGAGCUAAAAACUUGAGGAAGGGAACCUGCCUGGGUGGGUGCUACUUCUGAUUCAUUGUCCUUGUCCCUGUCAUAAGUACCUCCCUAUUGUAGAUAGAAGGGAAGGAAACUGUUGACUUGAGCUUGGCUAAAUUUCCUGAAGGUGGAGGACCUUAGAGUUGCUCCAAGUAAACUUUCCAAGGЖCUU
Sequence (SHORT NAMES ENCODING)	CGAAGGUGGGCAGGUCCCACCUUGUGGAGGAUGGAGGUGACCGGGGACGCCGGGGUACCAGAAUCUGGCGAGAUCCGGACUCUAAAGCCGUGUCUGCUGCGCCGCAACUACAGCCGCGAm6ACAGCACGGCGUGGCCGCCUCCUGCCUCGAAGACCUGAGGAGCAAGGCCUGUGACAUUCUGGCCAUUGAUAAGUCCCUGACACCAGUCACCCUGGUCCUGGCAGAGGAUGGCACCAUAGUGGAUGAUGACGAUUACUUUCUGUGUCUACCUUCCAAUACUAAGUUUGUGGCAUUGGCUAGUAAUGAGAAAUGGGCAUACAACAAUUCAGAUGGAGGUACAGCUUGGAUUUCCCAAGAGUCCUUUGAUGUAGAUGAAm6ACAGACAGCGGGGCAGGGUUGAAGUGGAAGAAUGUGGCCAGGCAGCUGAAAGAAGAUCUGUCCAGCAUCAYCCUCCUAUCAGAGGAGGACCUCCAGAUGCUUGUUGACGCUCCCUGCUCAGACCUGGCUCAGGAACUACGUCAGAGUUGUGCCACCGUCCAGCGGCUGCAGCACACACUCCAACAGGUGCUUGACCAAAGAGAGGAAGUGCGUCAGUCCAAGCAGCUCCUGCAGCUGUACCUCCAGGCUUUGGAGAAAGAGGGCAGCCUCUUGUCAAAGCAGGAAGAGUCCAAAGCUGCCUUUGGUGAGGAGGUGGAUGCAGUAGACACGGGUAUCAGCAGAGAGACCUCCUCGGACGUUGCGCUGGCGAGCCACAYCCUUACUGCACUGAGGGAGAAGCAGGCUCCAGAGCUGAGCUUAUCUAGUCAGGAUYUGGAGGUGGGCGGAAACCAGGGUCACUGAGCUACAGAGGAGGm6ACAUGCCCUGGGAUGUAGUAGUAUCAUGCAGAGGUGUGUGGGCCCUUUUGUUCACCUCUGCAGm6ACUGUGAAUCCUAGCUGCCAGUUUGCCUAUUAUAUGCCAAGGCAUUUGCAAAAAUCUCAUUAAUCUAAAUCAAAAUAGCUYUAAAGAAAAAUGCAUACACUUCCUCAGAUCAUCAAACAGm6ACUCUGGUCCAAGGUUGGUAAUGAAAUGm6ACUGUUCCUGACAGGGAGGAAUAGCAGGGCCCAAUCUUCUGAGAUGGCUUCUGGGUCUUUCCAUGGUCAGAGAAGAUCUAUAGUCCGUCCUGAGGUCUGUCAAUGUCACAGGAAAAGGCAAACUUGAGGGGAUCGUCGCCUGCUGGCUAAGACCAGGGAGCUAAAAACUUGAGGAAGGGAACCUGCCUGGGUGGGUGCUACUUCUGAUUCAUUGUCCUUGUCCCUGUCAUAAGUACCUCCCUAUUGUAGAUAGAAGGGAAGGAAACUGUUGACUUGAGCUUGGCUAAAUUUCCUGAAGGUGGAGGACCUUAGAGUUGCUCCAAGUAAACUUUCCAAGGm6ACUU
Sequence (MODOMICS CODE ENCODING)	CGAAGGUGGGCAGGUCCCACCUUGUGGAGGAUGGAGGUGACCGGGGACGCCGGGGUACCAGAAUCUGGCGAGAUCCGGACUCUAAAGCCGUGUCUGCUGCGCCGCAACUACAGCCGCGA2000000006ACAGCACGGCGUGGCCGCCUCCUGCCUCGAAGACCUGAGGAGCAAGGCCUGUGACAUUCUGGCCAUUGAUAAGUCCCUGACACCAGUCACCCUGGUCCUGGCAGAGGAUGGCACCAUAGUGGAUGAUGACGAUUACUUUCUGUGUCUACCUUCCAAUACUAAGUUUGUGGCAUUGGCUAGUAAUGAGAAAUGGGCAUACAACAAUUCAGAUGGAGGUACAGCUUGGAUUUCCCAAGAGUCCUUUGAUGUAGAUGAA2000000006ACAGACAGCGGGGCAGGGUUGAAGUGGAAGAAUGUGGCCAGGCAGCUGAAAGAAGAUCUGUCCAGCAUCA2000000009UCCUCCUAUCAGAGGAGGACCUCCAGAUGCUUGUUGACGCUCCCUGCUCAGACCUGGCUCAGGAACUACGUCAGAGUUGUGCCACCGUCCAGCGGCUGCAGCACACACUCCAACAGGUGCUUGACCAAAGAGAGGAAGUGCGUCAGUCCAAGCAGCUCCUGCAGCUGUACCUCCAGGCUUUGGAGAAAGAGGGCAGCCUCUUGUCAAAGCAGGAAGAGUCCAAAGCUGCCUUUGGUGAGGAGGUGGAUGCAGUAGACACGGGUAUCAGCAGAGAGACCUCCUCGGACGUUGCGCUGGCGAGCCACA2000000009UCCUUACUGCACUGAGGGAGAAGCAGGCUCCAGAGCUGAGCUUAUCUAGUCAGGAU2000000009UUGGAGGUGGGCGGAAACCAGGGUCACUGAGCUACAGAGGAGG2000000006ACAUGCCCUGGGAUGUAGUAGUAUCAUGCAGAGGUGUGUGGGCCCUUUUGUUCACCUCUGCAG2000000006ACUGUGAAUCCUAGCUGCCAGUUUGCCUAUUAUAUGCCAAGGCAUUUGCAAAAAUCUCAUUAAUCUAAAUCAAAAUAGCU2000000009UUAAAGAAAAAUGCAUACACUUCCUCAGAUCAUCAAACAG2000000006ACUCUGGUCCAAGGUUGGUAAUGAAAUG2000000006ACUGUUCCUGACAGGGAGGAAUAGCAGGGCCCAAUCUUCUGAGAUGGCUUCUGGGUCUUUCCAUGGUCAGAGAAGAUCUAUAGUCCGUCCUGAGGUCUGUCAAUGUCACAGGAAAAGGCAAACUUGAGGGGAUCGUCGCCUGCUGGCUAAGACCAGGGAGCUAAAAACUUGAGGAAGGGAACCUGCCUGGGUGGGUGCUACUUCUGAUUCAUUGUCCUUGUCCCUGUCAUAAGUACCUCCCUAUUGUAGAUAGAAGGGAAGGAAACUGUUGACUUGAGCUUGGCUAAAUUUCCUGAAGGUGGAGGACCUUAGAGUUGCUCCAAGUAAACUUUCCAAGG2000000006ACUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	120	376	446	752	808	851	914	994	1034	1062	1400
Modification Positions	m6A	m6A	Y	Y	Y	m6A	m6A	Y	m6A	m6A	m6A
Genomic Coordinates	1:10472369:-	1:10467285:-	1:10467215:-	1:10463119:-	1:10463063:-	1:10463020:-	1:10462957:-	1:10462877:-	1:10462837:-	1:10462809:-	1:10462471:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6UuHp6YApVKv aivdrAsbdKEU jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KTLz8piFYdwC BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm aHkqKEJkRYyb aivdrAsbdKEU msuJfBpJvM5H NjZ8bGGJsNSR QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 PF5iqBNSbHaa