General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000471538
Gene ID:	ENSG00000065526
Gene Name:	SPEN
Sequence (UNICHARACTER ENCODING)	CUAUAUGGAAUAUUUCUGGAAUAUUAGAGCCUACAGЖUUCUUUUAGAAGUUGAUAUCUGCCUCUCCAUUUUCACUACAUAAAGUGUACAAЖCAAAUUGGЖUUGUAACAAAAAAUCUGGCAGACCAUAAUGAUUCAACCACUUGGAUUCUACAAACAAUACUUUAACAUGGAAAUGUGUACUUGGAUGAAGAAGAGAGAAGGCAAUGCCUGAUUUUUCCAUUUUGGAUCUACACAAUUUCUGUAUUGUUGGAAUUACACUCUUUGAUGGAAUGGGGAAAAAUUAAAAUGAUGGЖUGUUUCCUAAAUCCUGGAAUAUAGCCAUUCUUUUCUAAUUGCUGGGAUAUAUGGGAUGUCUUGCUGUCAAGAUUCCACUAGCCCAGGGAAAGAGGЖUUACUAUAUCAUUUCUUAAGCAAGUUGCUGUCCAAUCAAAGGUЖCUUUAGCUUUGAЖCACAUGGUGAUGAUCAGUUGUGGAUACAGCAAUCAAAAUUGЖCUGGGCUGGAUGGCUACAAAAGUGAЖCUAUUGGCGAGCAЖCUGUGCCUUCCUCAUUCGUUGGAAUUGUAGAGGAUAUUUCCUCUUCUGCCAGCUACCUGAUUCAUACUUAGGGCUGGAAAUAUUUAUGAAUGUGGAUAAAUUUCUAAUUGUCUGCUAUCUCAAGAAAGAЖGUCUGGGGGUUUGAGAGUUACAGUUUGUCUGGGЖCUACUUGCUUCCAGUGGAAUUAUUUUGUCUGGUCACUAAGAUUUUUUUUUUCUUGUGGUUCAUCUAAAUAUCAUUUGACACCCUUGCCCAUUAAGAAGGUGGAUUACCCCCAUAAGAGGGGCCAAAAUUGGGGAAGUUAUGUUCACAAUUCUCUCCCUAGAUUUAAUUGGGAUUAUAGGUCGUGUUUCCACACUUGGAAAAGGGCUUCAGAUAACAGGGAGCGUGCUUAUGAACAUAGUGCCUAUGGЖCACCAUGAACGGGGGACGGGAGGAUUUGAUCGGЖCAAGACAUUACGAUCAGGAUUACUAUAGAGAUCCUCGAGAGCGGЖCUUUACAACAUGGGCUCUAUUACGCUUCUCGGAGUCGAAGUCCAAAUCGCUUUGAUGCUCAUGACCCCCGAUAUGAЖCCUAGGGCUCGCGAGCAGUUUACACUGCCCAGUGUGGUACACAGGGAUAUCUACAGGGAUGAUAUUACCCGGGAGGUACGAGGCAGAAGGCCAGAGCGGAAUUACCAGCACAGCAGGAGUCGGUCACCACAUUCAUCCCAGUCUAGAAAUCAGUCUCCUCAGAGACUGGCUAGCCAAGCAUCUAGACCCACAAGGUCCCCUAGCGGCAGCGGCUCUAGAAGUAGAUCCUCCAGUAGUGAUUCAAUCAGCAGCAGCAGUAGUACCAGCAGUGACAGGUAGGUUAACAGCCUUUUGUUAUAACAGAUGAG
Sequence (SHORT NAMES ENCODING)	CUAUAUGGAAUAUUUCUGGAAUAUUAGAGCCUACAGm6AUUCUUUUAGAAGUUGAUAUCUGCCUCUCCAUUUUCACUACAUAAAGUGUACAAm6ACAAAUUGGm6AUUGUAACAAAAAAUCUGGCAGACCAUAAUGAUUCAACCACUUGGAUUCUACAAACAAUACUUUAACAUGGAAAUGUGUACUUGGAUGAAGAAGAGAGAAGGCAAUGCCUGAUUUUUCCAUUUUGGAUCUACACAAUUUCUGUAUUGUUGGAAUUACACUCUUUGAUGGAAUGGGGAAAAAUUAAAAUGAUGGm6AUGUUUCCUAAAUCCUGGAAUAUAGCCAUUCUUUUCUAAUUGCUGGGAUAUAUGGGAUGUCUUGCUGUCAAGAUUCCACUAGCCCAGGGAAAGAGGm6AUUACUAUAUCAUUUCUUAAGCAAGUUGCUGUCCAAUCAAAGGUm6ACUUUAGCUUUGAm6ACACAUGGUGAUGAUCAGUUGUGGAUACAGCAAUCAAAAUUGm6ACUGGGCUGGAUGGCUACAAAAGUGAm6ACUAUUGGCGAGCAm6ACUGUGCCUUCCUCAUUCGUUGGAAUUGUAGAGGAUAUUUCCUCUUCUGCCAGCUACCUGAUUCAUACUUAGGGCUGGAAAUAUUUAUGAAUGUGGAUAAAUUUCUAAUUGUCUGCUAUCUCAAGAAAGAm6AGUCUGGGGGUUUGAGAGUUACAGUUUGUCUGGGm6ACUACUUGCUUCCAGUGGAAUUAUUUUGUCUGGUCACUAAGAUUUUUUUUUUCUUGUGGUUCAUCUAAAUAUCAUUUGACACCCUUGCCCAUUAAGAAGGUGGAUUACCCCCAUAAGAGGGGCCAAAAUUGGGGAAGUUAUGUUCACAAUUCUCUCCCUAGAUUUAAUUGGGAUUAUAGGUCGUGUUUCCACACUUGGAAAAGGGCUUCAGAUAACAGGGAGCGUGCUUAUGAACAUAGUGCCUAUGGm6ACACCAUGAACGGGGGACGGGAGGAUUUGAUCGGm6ACAAGACAUUACGAUCAGGAUUACUAUAGAGAUCCUCGAGAGCGGm6ACUUUACAACAUGGGCUCUAUUACGCUUCUCGGAGUCGAAGUCCAAAUCGCUUUGAUGCUCAUGACCCCCGAUAUGAm6ACCUAGGGCUCGCGAGCAGUUUACACUGCCCAGUGUGGUACACAGGGAUAUCUACAGGGAUGAUAUUACCCGGGAGGUACGAGGCAGAAGGCCAGAGCGGAAUUACCAGCACAGCAGGAGUCGGUCACCACAUUCAUCCCAGUCUAGAAAUCAGUCUCCUCAGAGACUGGCUAGCCAAGCAUCUAGACCCACAAGGUCCCCUAGCGGCAGCGGCUCUAGAAGUAGAUCCUCCAGUAGUGAUUCAAUCAGCAGCAGCAGUAGUACCAGCAGUGACAGGUAGGUUAACAGCCUUUUGUUAUAACAGAUGAG
Sequence (MODOMICS CODE ENCODING)	CUAUAUGGAAUAUUUCUGGAAUAUUAGAGCCUACAG2000000006AUUCUUUUAGAAGUUGAUAUCUGCCUCUCCAUUUUCACUACAUAAAGUGUACAA2000000006ACAAAUUGG2000000006AUUGUAACAAAAAAUCUGGCAGACCAUAAUGAUUCAACCACUUGGAUUCUACAAACAAUACUUUAACAUGGAAAUGUGUACUUGGAUGAAGAAGAGAGAAGGCAAUGCCUGAUUUUUCCAUUUUGGAUCUACACAAUUUCUGUAUUGUUGGAAUUACACUCUUUGAUGGAAUGGGGAAAAAUUAAAAUGAUGG2000000006AUGUUUCCUAAAUCCUGGAAUAUAGCCAUUCUUUUCUAAUUGCUGGGAUAUAUGGGAUGUCUUGCUGUCAAGAUUCCACUAGCCCAGGGAAAGAGG2000000006AUUACUAUAUCAUUUCUUAAGCAAGUUGCUGUCCAAUCAAAGGU2000000006ACUUUAGCUUUGA2000000006ACACAUGGUGAUGAUCAGUUGUGGAUACAGCAAUCAAAAUUG2000000006ACUGGGCUGGAUGGCUACAAAAGUGA2000000006ACUAUUGGCGAGCA2000000006ACUGUGCCUUCCUCAUUCGUUGGAAUUGUAGAGGAUAUUUCCUCUUCUGCCAGCUACCUGAUUCAUACUUAGGGCUGGAAAUAUUUAUGAAUGUGGAUAAAUUUCUAAUUGUCUGCUAUCUCAAGAAAGA2000000006AGUCUGGGGGUUUGAGAGUUACAGUUUGUCUGGG2000000006ACUACUUGCUUCCAGUGGAAUUAUUUUGUCUGGUCACUAAGAUUUUUUUUUUCUUGUGGUUCAUCUAAAUAUCAUUUGACACCCUUGCCCAUUAAGAAGGUGGAUUACCCCCAUAAGAGGGGCCAAAAUUGGGGAAGUUAUGUUCACAAUUCUCUCCCUAGAUUUAAUUGGGAUUAUAGGUCGUGUUUCCACACUUGGAAAAGGGCUUCAGAUAACAGGGAGCGUGCUUAUGAACAUAGUGCCUAUGG2000000006ACACCAUGAACGGGGGACGGGAGGAUUUGAUCGG2000000006ACAAGACAUUACGAUCAGGAUUACUAUAGAGAUCCUCGAGAGCGG2000000006ACUUUACAACAUGGGCUCUAUUACGCUUCUCGGAGUCGAAGUCCAAAUCGCUUUGAUGCUCAUGACCCCCGAUAUGA2000000006ACCUAGGGCUCGCGAGCAGUUUACACUGCCCAGUGUGGUACACAGGGAUAUCUACAGGGAUGAUAUUACCCGGGAGGUACGAGGCAGAAGGCCAGAGCGGAAUUACCAGCACAGCAGGAGUCGGUCACCACAUUCAUCCCAGUCUAGAAAUCAGUCUCCUCAGAGACUGGCUAGCCAAGCAUCUAGACCCACAAGGUCCCCUAGCGGCAGCGGCUCUAGAAGUAGAUCCUCCAGUAGUGAUUCAAUCAGCAGCAGCAGUAGUACCAGCAGUGACAGGUAGGUUAACAGCCUUUUGUUAUAACAGAUGAG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	37	91	100	293	389	433	446	488	514	528	658	692	940	974	1019	1096
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	1:15873538:+	1:15873592:+	1:15873601:+	1:15873794:+	1:15873890:+	1:15873934:+	1:15873947:+	1:15873989:+	1:15874015:+	1:15874029:+	1:15874159:+	1:15874193:+	1:15876247:+	1:15876281:+	1:15876326:+	1:15876403:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	msuJfBpJvM5H Lny8GcCeVGc9 UKen6WEino9G	4HMi5ykupT9V Lny8GcCeVGc9	4HMi5ykupT9V 5Nnepx5V7yHo Lny8GcCeVGc9	4HMi5ykupT9V 5aTkEfEpX8Xm msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo jNkxUQNx8GRd msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G	4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6UuHp6YApVKv jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	4HMi5ykupT9V 5aTkEfEpX8Xm gBgcfFQ5WN9C msuJfBpJvM5H VyCX26p5UBRL	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6UuHp6YApVKv gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se Lny8GcCeVGc9	4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb Ap2q43bQLNek gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aHkqKEJkRYyb jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 8cMbzB4aD5Se BkoLW2CBToyL BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 UKen6WEino9G