General Data

RNA Type	tRNA
SOTerm	SO:0000264
Original Source	tdbR00000215
Secondary Structure	(((((((..(((.....[.....)))((((((.......))))))(((....)))...(((((..]....))))))))))))....
Sequence (UNICHARACTER ENCODING)	GCGCGGGUAGCCAA(UGGCCAAAGGCRCAGCGCU5AGKACGCUGUGGUGUAGACCUU?GCAGG]PBGAACCCUGUCCCGCGCACCA
Sequence (SHORT NAMES ENCODING)	GCGCGGGUAGCCAApG+UGGCCAAAGGCpm2,2GCAGCGCUpmo5UAGpm1GACGCUGUGGUGUAGACCUUpm5CGCAGGpm1YpYpCmGAACCCUGUCCCGCGCACCA
Sequence (MODOMICS CODE ENCODING)	GCGCGGGUAGCCAA2000103551GUGGCCAAAGGC2000022551GCAGCGCU2000501551UAG2000001551GACGCUGUGGUGUAGACCUU2000005551CGCAGG2000019551U2000009551U2000090551CGAACCCUGUCCCGCGCACCA
Consensus Secondary Structure	.(((((((..((((......[....)))).(((((.......)))))........................(((((..]....))))))))))))....
Alignment with Modification	-GCGCGGGUAGCCAA(U--GGCCAAAGGCRCAGCGCU5AGKACGCUGUGGUGUAGACCUU?----------GCAGG]PBGAACCCUGUCCCGCGCACCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

RNA-2D Representation

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the alignment	15	26	34	37	45L	54	55	56
Position in the sequence	15	27	35	38	58	64	65	66
Modification positions	G+	m2,2G	mo5U	m1G	m5C	m1Y	Y	Cm
Level of Experimental Evidence	5	5	5	5	5	5	5	5
Level of Experimental Reliability	5	5	5	5	5	5	5	5
Source	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS	MODOMICS