General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000294401
Gene ID:	ENSG00000007923
Gene Name:	DNAJC11
Sequence (UNICHARACTER ENCODING)	GACGGCUCCGGGCCGCCAGGGGCCGCUGUGGCGCAGCCGGGCUGGCCCGCGCUGUCCCUGACGCGGAUCACUGGCCCCUCUUGAGCACGGCCUUGCCGGUUUGGCGGGGUGAAAGGUUGCGAAGAUGGCGACGGCCUUGAGCGAGGAGGAGCUGGACAAUGAAGACUAUUACUCGUUGCUGAACGUGCGCAGGGAGGCCUCUUCUGAAGAGCUGAAAGCUGCCUACCGGAGGCUCUGUAUGCUCUACCAPCCAGACAAGCACAGAGACCCAGAGCUCAAGUCACAGGCGGAACGACUGUUUAACCUUGUUCACCAGGCUUAUGAAGUGCUUAGUGACCCCCAAACCAGGGCCAUCUAUGAUAUAUAUGGGAAGAGAGGACUGGAAAUGGAAGGAUGGGAGGUUGUGGAAAGGAGGAGAЖCCCCUGCUGAAAUUCGAGAGGAGUUUGAGCGGCUGCAGAGAGAGAGAGAAGAGAGGAGAUUGCAGCAGCGAACCAAUCCCAAGGGAACGAUCAGCGUUGGAGUAGAUGCCACCGACCUUUUUGAUCGCUAUGAUGAGGAGUAUGAAGAUGUGUCCGGCAGUAGCUUUCCGCAGAUUGAAAUUAAUAAAAUGCACAUAUCCCAGUCCAUUGAGGCACCCUUGACAGCGACAGACACAGCCAPCCUCUCUGGAAGCCUCUCAACCCAGAAUGGAAAUGGAGGAGGUUCCAUUAACUUUGCGCUCAGACGAGUAЖCUUCGGCAAAGGGAUGGGGAGAGUUGGAAUUUGGAGCUGGAGЖCCUACAGGGGCCUUUGUUCGGUCUCAAGCUGUUCCGUAAUCUCACACCAAGAUGCUUUGUGACAACAAЖCUGUGCUCUGCAGUUUUCAUCCCGUGGAAUCCGACCCGGCCUGACCACUGUCCUAGCUCGGAACCUAGACAAGAACACCGUGGGCUACCUGCAGUGGCGAUGGGGUAUCCAGUCAGCCAUGAACACUAGCAUCGUCCGAGACACUAAAACCAGCCACUUCACUGUGGCCCUGCAGCUGGGAAUCCCUCACUCCUUUGCACUGAUCAGCUAUCAGCACAAAUUCCAAGAUGACGAUCAGACUCGUGUGAAAGGAUCCCUCAAAGCAGGCUUCUUUGGGACGGUGGUGGAGUACGGAGCUGAGAGGAAGAUCUCCAGGCACAGCGUUUUGGGUGCAGCUGUCAGCGUUGGAGUUCCACAGGGUGUUUCUCUCAAAGUCAAGGAAUUGGAGAAGCAGAGGGAAAGCGCCGCCACCGAUGUGCUGCAGAAGAAGCAAGAGGCGGAGUCCGCUGUCCGGCUGAUGCAGGAAUCUGUCCGAAGGAUAAUUGAGGCAGAAGAGUCCAGAAUGGGCCUCAUCAUCGUCAAUGCCUGGUACGGGAAGUUUGUCAAUGACAAGAGCAGGAAGAGCGAGAAGGUGAAGGUGAUUGACGUGACUGUGCCCCUGCAGUGCCUGGUGAAGGACUCGAAGCUCAPCCUCACGGAGGCCUCCAAGGCUGGGCUGCCUGGCUUUUAUGACCCGUGUGUGGGGGAAGAGAAGAACCUGAAAGUGCUCUAUCAGUUCCGGGGCGUCCUGCAUCAGGUGAUGGUGCUGGACAGUGAGGCCCUCCGGAUACCAAAGCAGUCCCACAGGAUCGAUACAGAUGGAUAAACUGCCAAGAACCAGAUUUUUAAAAGGCCGCAAAAAAUCUUUUCCUGGGAGUCUACAAAUUUGGAAAUGAAAAAACCCAGACAUCAGAUGUUUUUAUUUUAUAUUAUUAUUAUAGAAGGUGGUACCAUUAUCAAUUAUGUGAAGGGЖCAUGCAGACACCCCAGCUUUUGAGGGUGCUGGGGGUAGGЖCUGAGGCAGCCCCACUGGGAACCAGACUGCAGCCUGGCCCAUGGCUGUUUUCCCAAGGAUCAGUUCCUGGAGGGAAGGGCUCUGGCCCUGACUCCGCUGUGUCCCGAGCACACGUGCUGACCGCAGCCCGCCGCCCUGUAGUUCUUGGCUGGGUCUGGAGGUGUCUGUGGAGCACCCUGCCCUCACCACAGGAGCGUGAGCCACUUCUGCAGUCCACGCUGAACAUGGGAAACAACCUGAAAAGCAGGCAGGCCUCCCGGUCAGGGAGCCUCUGCUGUGCUGGCUUCCCAUGACCACCUCCUCUUGCUGAAAUAUUACUGCUUGAAUCUGGAGCAGAUUGCGGGUUUAUAAAЖCUGCUUUUUAUCUGAGAЖCAAA
Sequence (SHORT NAMES ENCODING)	GACGGCUCCGGGCCGCCAGGGGCCGCUGUGGCGCAGCCGGGCUGGCCCGCGCUGUCCCUGACGCGGAUCACUGGCCCCUCUUGAGCACGGCCUUGCCGGUUUGGCGGGGUGAAAGGUUGCGAAGAUGGCGACGGCCUUGAGCGAGGAGGAGCUGGACAAUGAAGACUAUUACUCGUUGCUGAACGUGCGCAGGGAGGCCUCUUCUGAAGAGCUGAAAGCUGCCUACCGGAGGCUCUGUAUGCUCUACCAYCCAGACAAGCACAGAGACCCAGAGCUCAAGUCACAGGCGGAACGACUGUUUAACCUUGUUCACCAGGCUUAUGAAGUGCUUAGUGACCCCCAAACCAGGGCCAUCUAUGAUAUAUAUGGGAAGAGAGGACUGGAAAUGGAAGGAUGGGAGGUUGUGGAAAGGAGGAGAm6ACCCCUGCUGAAAUUCGAGAGGAGUUUGAGCGGCUGCAGAGAGAGAGAGAAGAGAGGAGAUUGCAGCAGCGAACCAAUCCCAAGGGAACGAUCAGCGUUGGAGUAGAUGCCACCGACCUUUUUGAUCGCUAUGAUGAGGAGUAUGAAGAUGUGUCCGGCAGUAGCUUUCCGCAGAUUGAAAUUAAUAAAAUGCACAUAUCCCAGUCCAUUGAGGCACCCUUGACAGCGACAGACACAGCCAYCCUCUCUGGAAGCCUCUCAACCCAGAAUGGAAAUGGAGGAGGUUCCAUUAACUUUGCGCUCAGACGAGUAm6ACUUCGGCAAAGGGAUGGGGAGAGUUGGAAUUUGGAGCUGGAGm6ACCUACAGGGGCCUUUGUUCGGUCUCAAGCUGUUCCGUAAUCUCACACCAAGAUGCUUUGUGACAACAAm6ACUGUGCUCUGCAGUUUUCAUCCCGUGGAAUCCGACCCGGCCUGACCACUGUCCUAGCUCGGAACCUAGACAAGAACACCGUGGGCUACCUGCAGUGGCGAUGGGGUAUCCAGUCAGCCAUGAACACUAGCAUCGUCCGAGACACUAAAACCAGCCACUUCACUGUGGCCCUGCAGCUGGGAAUCCCUCACUCCUUUGCACUGAUCAGCUAUCAGCACAAAUUCCAAGAUGACGAUCAGACUCGUGUGAAAGGAUCCCUCAAAGCAGGCUUCUUUGGGACGGUGGUGGAGUACGGAGCUGAGAGGAAGAUCUCCAGGCACAGCGUUUUGGGUGCAGCUGUCAGCGUUGGAGUUCCACAGGGUGUUUCUCUCAAAGUCAAGGAAUUGGAGAAGCAGAGGGAAAGCGCCGCCACCGAUGUGCUGCAGAAGAAGCAAGAGGCGGAGUCCGCUGUCCGGCUGAUGCAGGAAUCUGUCCGAAGGAUAAUUGAGGCAGAAGAGUCCAGAAUGGGCCUCAUCAUCGUCAAUGCCUGGUACGGGAAGUUUGUCAAUGACAAGAGCAGGAAGAGCGAGAAGGUGAAGGUGAUUGACGUGACUGUGCCCCUGCAGUGCCUGGUGAAGGACUCGAAGCUCAYCCUCACGGAGGCCUCCAAGGCUGGGCUGCCUGGCUUUUAUGACCCGUGUGUGGGGGAAGAGAAGAACCUGAAAGUGCUCUAUCAGUUCCGGGGCGUCCUGCAUCAGGUGAUGGUGCUGGACAGUGAGGCCCUCCGGAUACCAAAGCAGUCCCACAGGAUCGAUACAGAUGGAUAAACUGCCAAGAACCAGAUUUUUAAAAGGCCGCAAAAAAUCUUUUCCUGGGAGUCUACAAAUUUGGAAAUGAAAAAACCCAGACAUCAGAUGUUUUUAUUUUAUAUUAUUAUUAUAGAAGGUGGUACCAUUAUCAAUUAUGUGAAGGGm6ACAUGCAGACACCCCAGCUUUUGAGGGUGCUGGGGGUAGGm6ACUGAGGCAGCCCCACUGGGAACCAGACUGCAGCCUGGCCCAUGGCUGUUUUCCCAAGGAUCAGUUCCUGGAGGGAAGGGCUCUGGCCCUGACUCCGCUGUGUCCCGAGCACACGUGCUGACCGCAGCCCGCCGCCCUGUAGUUCUUGGCUGGGUCUGGAGGUGUCUGUGGAGCACCCUGCCCUCACCACAGGAGCGUGAGCCACUUCUGCAGUCCACGCUGAACAUGGGAAACAACCUGAAAAGCAGGCAGGCCUCCCGGUCAGGGAGCCUCUGCUGUGCUGGCUUCCCAUGACCACCUCCUCUUGCUGAAAUAUUACUGCUUGAAUCUGGAGCAGAUUGCGGGUUUAUAAAm6ACUGCUUUUUAUCUGAGAm6ACAAA
Sequence (MODOMICS CODE ENCODING)	GACGGCUCCGGGCCGCCAGGGGCCGCUGUGGCGCAGCCGGGCUGGCCCGCGCUGUCCCUGACGCGGAUCACUGGCCCCUCUUGAGCACGGCCUUGCCGGUUUGGCGGGGUGAAAGGUUGCGAAGAUGGCGACGGCCUUGAGCGAGGAGGAGCUGGACAAUGAAGACUAUUACUCGUUGCUGAACGUGCGCAGGGAGGCCUCUUCUGAAGAGCUGAAAGCUGCCUACCGGAGGCUCUGUAUGCUCUACCA2000000009UCCAGACAAGCACAGAGACCCAGAGCUCAAGUCACAGGCGGAACGACUGUUUAACCUUGUUCACCAGGCUUAUGAAGUGCUUAGUGACCCCCAAACCAGGGCCAUCUAUGAUAUAUAUGGGAAGAGAGGACUGGAAAUGGAAGGAUGGGAGGUUGUGGAAAGGAGGAGA2000000006ACCCCUGCUGAAAUUCGAGAGGAGUUUGAGCGGCUGCAGAGAGAGAGAGAAGAGAGGAGAUUGCAGCAGCGAACCAAUCCCAAGGGAACGAUCAGCGUUGGAGUAGAUGCCACCGACCUUUUUGAUCGCUAUGAUGAGGAGUAUGAAGAUGUGUCCGGCAGUAGCUUUCCGCAGAUUGAAAUUAAUAAAAUGCACAUAUCCCAGUCCAUUGAGGCACCCUUGACAGCGACAGACACAGCCA2000000009UCCUCUCUGGAAGCCUCUCAACCCAGAAUGGAAAUGGAGGAGGUUCCAUUAACUUUGCGCUCAGACGAGUA2000000006ACUUCGGCAAAGGGAUGGGGAGAGUUGGAAUUUGGAGCUGGAG2000000006ACCUACAGGGGCCUUUGUUCGGUCUCAAGCUGUUCCGUAAUCUCACACCAAGAUGCUUUGUGACAACAA2000000006ACUGUGCUCUGCAGUUUUCAUCCCGUGGAAUCCGACCCGGCCUGACCACUGUCCUAGCUCGGAACCUAGACAAGAACACCGUGGGCUACCUGCAGUGGCGAUGGGGUAUCCAGUCAGCCAUGAACACUAGCAUCGUCCGAGACACUAAAACCAGCCACUUCACUGUGGCCCUGCAGCUGGGAAUCCCUCACUCCUUUGCACUGAUCAGCUAUCAGCACAAAUUCCAAGAUGACGAUCAGACUCGUGUGAAAGGAUCCCUCAAAGCAGGCUUCUUUGGGACGGUGGUGGAGUACGGAGCUGAGAGGAAGAUCUCCAGGCACAGCGUUUUGGGUGCAGCUGUCAGCGUUGGAGUUCCACAGGGUGUUUCUCUCAAAGUCAAGGAAUUGGAGAAGCAGAGGGAAAGCGCCGCCACCGAUGUGCUGCAGAAGAAGCAAGAGGCGGAGUCCGCUGUCCGGCUGAUGCAGGAAUCUGUCCGAAGGAUAAUUGAGGCAGAAGAGUCCAGAAUGGGCCUCAUCAUCGUCAAUGCCUGGUACGGGAAGUUUGUCAAUGACAAGAGCAGGAAGAGCGAGAAGGUGAAGGUGAUUGACGUGACUGUGCCCCUGCAGUGCCUGGUGAAGGACUCGAAGCUCA2000000009UCCUCACGGAGGCCUCCAAGGCUGGGCUGCCUGGCUUUUAUGACCCGUGUGUGGGGGAAGAGAAGAACCUGAAAGUGCUCUAUCAGUUCCGGGGCGUCCUGCAUCAGGUGAUGGUGCUGGACAGUGAGGCCCUCCGGAUACCAAAGCAGUCCCACAGGAUCGAUACAGAUGGAUAAACUGCCAAGAACCAGAUUUUUAAAAGGCCGCAAAAAAUCUUUUCCUGGGAGUCUACAAAUUUGGAAAUGAAAAAACCCAGACAUCAGAUGUUUUUAUUUUAUAUUAUUAUUAUAGAAGGUGGUACCAUUAUCAAUUAUGUGAAGGG2000000006ACAUGCAGACACCCCAGCUUUUGAGGGUGCUGGGGGUAGG2000000006ACUGAGGCAGCCCCACUGGGAACCAGACUGCAGCCUGGCCCAUGGCUGUUUUCCCAAGGAUCAGUUCCUGGAGGGAAGGGCUCUGGCCCUGACUCCGCUGUGUCCCGAGCACACGUGCUGACCGCAGCCCGCCGCCCUGUAGUUCUUGGCUGGGUCUGGAGGUGUCUGUGGAGCACCCUGCCCUCACCACAGGAGCGUGAGCCACUUCUGCAGUCCACGCUGAACAUGGGAAACAACCUGAAAAGCAGGCAGGCCUCCCGGUCAGGGAGCCUCUGCUGUGCUGGCUUCCCAUGACCACCUCCUCUUGCUGAAAUAUUACUGCUUGAAUCUGGAGCAGAUUGCGGGUUUAUAAA2000000006ACUGCUUUUUAUCUGAGA2000000006ACAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	250	419	660	731	774	843	1473	1795	1835	2188	2206
Modification Positions	Y	m6A	Y	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	1:6680984:-	1:6667792:-	1:6652923:-	1:6652852:-	1:6651583:-	1:6645964:-	1:6637217:-	1:6635528:-	1:6635488:-	1:6635135:-	1:6635117:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 Yfn77uLS5tv8	93arJtwJmuS9 BkoLW2CBToyL BtsJQJ3DteUq bXBqJigD9oV3 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U 93arJtwJmuS9 BkoLW2CBToyL nfCHyrYzE6fB UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 ArijeGVTwYBw KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8