General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000524652
Gene ID:	ENSG00000009307
Gene Name:	CSDE1
Sequence (UNICHARACTER ENCODING)	GAGAGAAGCGAGAUUUAUUCCUACGUACCGGGCCGUGCUGCUUAUGGCGGCGCUGGAGAGGGGGCGCUGAGCUGUUGGGUAUGAAGUGUAACAGAЖCAGACUPUACCACCUGAAACUGCUGCUUCAAGUPCAGAUCAGGCAAGGAACAAACCUCGUAЖCAACUAЖCAAGACCAAAGAAGAGUACACUUAAGUUGAAGЖCACAACACUUGAUCUGAAACAAGAAGUUUGUGCCUACUCAACAGCUUUGAAAGAGCACUUCCCAACGCUGCUAGUAGUCUUUGUUUUCUUCAGUGCUGUACUGUGAGAUUGCCCGGUACAGCAGCAGUUGUAUUCUPUAUUAGCUUGGUAGAUCAUUUUCUCUCGCUCUUUUUUUUAAUACUAGCAACUUUCAUCCUUUGAAACGUGUGCUGAAAAAGAAGAAUCAGCAAAUACUACUGAAAGUGCAAUAUUUGAGUAUCACUGCGAGAUGAGCUUUGAUCCAAACCUUCUCCACAACAAUGGACAUAAUGGGUACCCUAAUGGUACUUCAGCAGCACUGCGUGAAACUGGGGUUAUUGAAAAACUGUUAACCUCUUACGGAUUUAUUCAGUGUPCAGAACGUCAAGCUAGACUUUUCUUCCACUGUUCACAGUAUAAUGGCAACCUGCAAGACUUAAAAGUAGGAGAUGAUGUUGAAUUUGAAGUAUCAUCGGACCGACGGACUGGGAAACCCAUUGCUGUUAAACUGGUGAAGAUAAAACAAGAAAUCCPCCCUGAAGAACGAAUGAAUGGЖCAAGAAGUGUUUUAUCUGACUUACACCCCUGAAGAUGUCGAAGGGAACGUUCAGCUGGAAACUGGAGAUAAAAUAAACUUUGUAAUUGAUAACAAUAAЖCAUACUGGUGCUGUAAGUGCUCGCAACAUUAUGCUGUUGAAAAAGAAЖCAAGCCCGCUGUCAGGGAGUAGUUUGUGCCAUGAAGGAGGCAUUUGGCUPUAUUGAAAGAGGUGAUGUUGUAAAAGAGAUAUUCUUUCACUAUAGUGAAUUUAAGGGUGACUUAGAAACCUUACAGCCUGGCGAUGAUGUGGAAUUCACAAUCAAGGACAGAAAUGGUAAAGAAGUUGCAACAGAUGUCAGACUAUUGCCUCAAGGAACAGUCAUUUUUGAAGAUAUCAGCAUUGAACAUUUUGAAGGAACUGUAACCAAAGUUAUCCCAAAAGUACCCAGUAAAAACCAGAAUGACCCAUUGCCAGGACGCAUCAAAGUUGACUUUGUGAUCCCUAAAGAACUUCCCUUUGGAGACAAAGAUACGAAAUCCAAGGUGACCCUGCUGGAAGGUGACCAUGUUAGGUUUAAUAUUUCAACAGACCGACGUGACAAAUUAGAGCGAGCAACCAAUAUAGAAGUUCUGUCAAAUACЖUUUCAGUUCACUAAUGAAGCCCGAGAAAUGGUAAGUGUUGGAUAUUACUGGAUAUGUAUCUAAUAUGCGAAAGCCAAUGUUAUAUUCAAGUUUAUACUACUAAAUUAAAAUUUUUCUUAAGUUAAAUGACCCUAAUGGGCAUUUACCUUGUUAAGGUGAUUAAGAAUCAUACACAUUUGAGUCAGUCUGGGUUAUCUCUGGCAGUUAUCUUGGAAAUAUAUGUGAAAAAAUUUUUUGAAUGGAAAUCUGGACAGGAUUACUAAGAUAUUUUUAGAGUCAGUGAUUCUCAGGCCCUUAAUAUGAAGAGUAAGAAAAUUCAAGUUCAUCAUUGUAGAAAGUAGAUUUUCCCAAACUAUUUCCUAAGACAUUUAAUUAGUGGUUUCUGUUUUUAGGAAACACAAUUCUUCCUCCAGUGUGGUCCAGGGAAGCCAAAAGAUUGAACACCCAUGAUCUAGACACUAGAUCACACAUAAAAUACACUAACAGCAAUGAUAGCUGAUGAGCUUUUUUAAAAAAAAAAUCAUAGGCACGGUGGCUCACACCUGUAAUCCCAGCACUUUGGGAGGCUGAGGCGGGUGAUCACUUGAGGUCAGGAGUUCAAGACCAGCCUGGCCAACAUGGUAAAACCCCGUCUCUACUAAAAAUAGAAAAAUUAGCCAGGUGUGACGGUGGGCACCUGUAAUCCUAACUACUCAGGAGGCUGAGACAGGAGAAUCGCUUGAACCUAGGAGGCAGAGGUUGCAGUAAGCCAAUACCAUGCCGUUGCCCUGCAACCUGGGUGACAGAGGAAGACUGUCUCAAAAAAAUAAUUGCAAAAACAUCUCAUCAUGUUUUAAGAAGGUUUAACAAUUUGUUGUGUUGGGCCACAUUCAGAGCUGUCCUAGGCCAUGGUUUGGACAAGCUUGCAAUUAAACCAGAGUCAAAAAGGUUUUGUUUUGGCAGAACUUCACAAAUUGUUUUUUAAGAGUUUGUGUCUGGGAGUGGCAUAAACCAACCAGAUUUUUUCCCAAACAUGUUUUAUGAACUCAUUUUCUCAGACAUAAUUUGCAUUUAGUUACGUUUGGGAUCAUAUCAUCUACACUAUAACUCAGUGUUGCCAGUGGAACUGGGUACAUUGAAUGAAAAUUUAAGUUUCUUGAGUUUUUUUUAAUCCUUUGCCUUUGAAGAACUGGUUGUAUUUGACACAGUGUAUUUAACUUUAAAAGUUUGUAAGUCUGAAUGUGUGAUUUU
Sequence (SHORT NAMES ENCODING)	GAGAGAAGCGAGAUUUAUUCCUACGUACCGGGCCGUGCUGCUUAUGGCGGCGCUGGAGAGGGGGCGCUGAGCUGUUGGGUAUGAAGUGUAACAGAm6ACAGACUYUACCACCUGAAACUGCUGCUUCAAGUYCAGAUCAGGCAAGGAACAAACCUCGUAm6ACAACUAm6ACAAGACCAAAGAAGAGUACACUUAAGUUGAAGm6ACACAACACUUGAUCUGAAACAAGAAGUUUGUGCCUACUCAACAGCUUUGAAAGAGCACUUCCCAACGCUGCUAGUAGUCUUUGUUUUCUUCAGUGCUGUACUGUGAGAUUGCCCGGUACAGCAGCAGUUGUAUUCUYUAUUAGCUUGGUAGAUCAUUUUCUCUCGCUCUUUUUUUUAAUACUAGCAACUUUCAUCCUUUGAAACGUGUGCUGAAAAAGAAGAAUCAGCAAAUACUACUGAAAGUGCAAUAUUUGAGUAUCACUGCGAGAUGAGCUUUGAUCCAAACCUUCUCCACAACAAUGGACAUAAUGGGUACCCUAAUGGUACUUCAGCAGCACUGCGUGAAACUGGGGUUAUUGAAAAACUGUUAACCUCUUACGGAUUUAUUCAGUGUYCAGAACGUCAAGCUAGACUUUUCUUCCACUGUUCACAGUAUAAUGGCAACCUGCAAGACUUAAAAGUAGGAGAUGAUGUUGAAUUUGAAGUAUCAUCGGACCGACGGACUGGGAAACCCAUUGCUGUUAAACUGGUGAAGAUAAAACAAGAAAUCCYCCCUGAAGAACGAAUGAAUGGm6ACAAGAAGUGUUUUAUCUGACUUACACCCCUGAAGAUGUCGAAGGGAACGUUCAGCUGGAAACUGGAGAUAAAAUAAACUUUGUAAUUGAUAACAAUAAm6ACAUACUGGUGCUGUAAGUGCUCGCAACAUUAUGCUGUUGAAAAAGAAm6ACAAGCCCGCUGUCAGGGAGUAGUUUGUGCCAUGAAGGAGGCAUUUGGCUYUAUUGAAAGAGGUGAUGUUGUAAAAGAGAUAUUCUUUCACUAUAGUGAAUUUAAGGGUGACUUAGAAACCUUACAGCCUGGCGAUGAUGUGGAAUUCACAAUCAAGGACAGAAAUGGUAAAGAAGUUGCAACAGAUGUCAGACUAUUGCCUCAAGGAACAGUCAUUUUUGAAGAUAUCAGCAUUGAACAUUUUGAAGGAACUGUAACCAAAGUUAUCCCAAAAGUACCCAGUAAAAACCAGAAUGACCCAUUGCCAGGACGCAUCAAAGUUGACUUUGUGAUCCCUAAAGAACUUCCCUUUGGAGACAAAGAUACGAAAUCCAAGGUGACCCUGCUGGAAGGUGACCAUGUUAGGUUUAAUAUUUCAACAGACCGACGUGACAAAUUAGAGCGAGCAACCAAUAUAGAAGUUCUGUCAAAUACm6AUUUCAGUUCACUAAUGAAGCCCGAGAAAUGGUAAGUGUUGGAUAUUACUGGAUAUGUAUCUAAUAUGCGAAAGCCAAUGUUAUAUUCAAGUUUAUACUACUAAAUUAAAAUUUUUCUUAAGUUAAAUGACCCUAAUGGGCAUUUACCUUGUUAAGGUGAUUAAGAAUCAUACACAUUUGAGUCAGUCUGGGUUAUCUCUGGCAGUUAUCUUGGAAAUAUAUGUGAAAAAAUUUUUUGAAUGGAAAUCUGGACAGGAUUACUAAGAUAUUUUUAGAGUCAGUGAUUCUCAGGCCCUUAAUAUGAAGAGUAAGAAAAUUCAAGUUCAUCAUUGUAGAAAGUAGAUUUUCCCAAACUAUUUCCUAAGACAUUUAAUUAGUGGUUUCUGUUUUUAGGAAACACAAUUCUUCCUCCAGUGUGGUCCAGGGAAGCCAAAAGAUUGAACACCCAUGAUCUAGACACUAGAUCACACAUAAAAUACACUAACAGCAAUGAUAGCUGAUGAGCUUUUUUAAAAAAAAAAUCAUAGGCACGGUGGCUCACACCUGUAAUCCCAGCACUUUGGGAGGCUGAGGCGGGUGAUCACUUGAGGUCAGGAGUUCAAGACCAGCCUGGCCAACAUGGUAAAACCCCGUCUCUACUAAAAAUAGAAAAAUUAGCCAGGUGUGACGGUGGGCACCUGUAAUCCUAACUACUCAGGAGGCUGAGACAGGAGAAUCGCUUGAACCUAGGAGGCAGAGGUUGCAGUAAGCCAAUACCAUGCCGUUGCCCUGCAACCUGGGUGACAGAGGAAGACUGUCUCAAAAAAAUAAUUGCAAAAACAUCUCAUCAUGUUUUAAGAAGGUUUAACAAUUUGUUGUGUUGGGCCACAUUCAGAGCUGUCCUAGGCCAUGGUUUGGACAAGCUUGCAAUUAAACCAGAGUCAAAAAGGUUUUGUUUUGGCAGAACUUCACAAAUUGUUUUUUAAGAGUUUGUGUCUGGGAGUGGCAUAAACCAACCAGAUUUUUUCCCAAACAUGUUUUAUGAACUCAUUUUCUCAGACAUAAUUUGCAUUUAGUUACGUUUGGGAUCAUAUCAUCUACACUAUAACUCAGUGUUGCCAGUGGAACUGGGUACAUUGAAUGAAAAUUUAAGUUUCUUGAGUUUUUUUUAAUCCUUUGCCUUUGAAGAACUGGUUGUAUUUGACACAGUGUAUUUAACUUUAAAAGUUUGUAAGUCUGAAUGUGUGAUUUU
Sequence (MODOMICS CODE ENCODING)	GAGAGAAGCGAGAUUUAUUCCUACGUACCGGGCCGUGCUGCUUAUGGCGGCGCUGGAGAGGGGGCGCUGAGCUGUUGGGUAUGAAGUGUAACAGA2000000006ACAGACU2000000009UUACCACCUGAAACUGCUGCUUCAAGU2000000009UCAGAUCAGGCAAGGAACAAACCUCGUA2000000006ACAACUA2000000006ACAAGACCAAAGAAGAGUACACUUAAGUUGAAG2000000006ACACAACACUUGAUCUGAAACAAGAAGUUUGUGCCUACUCAACAGCUUUGAAAGAGCACUUCCCAACGCUGCUAGUAGUCUUUGUUUUCUUCAGUGCUGUACUGUGAGAUUGCCCGGUACAGCAGCAGUUGUAUUCU2000000009UUAUUAGCUUGGUAGAUCAUUUUCUCUCGCUCUUUUUUUUAAUACUAGCAACUUUCAUCCUUUGAAACGUGUGCUGAAAAAGAAGAAUCAGCAAAUACUACUGAAAGUGCAAUAUUUGAGUAUCACUGCGAGAUGAGCUUUGAUCCAAACCUUCUCCACAACAAUGGACAUAAUGGGUACCCUAAUGGUACUUCAGCAGCACUGCGUGAAACUGGGGUUAUUGAAAAACUGUUAACCUCUUACGGAUUUAUUCAGUGU2000000009UCAGAACGUCAAGCUAGACUUUUCUUCCACUGUUCACAGUAUAAUGGCAACCUGCAAGACUUAAAAGUAGGAGAUGAUGUUGAAUUUGAAGUAUCAUCGGACCGACGGACUGGGAAACCCAUUGCUGUUAAACUGGUGAAGAUAAAACAAGAAAUCC2000000009UCCCUGAAGAACGAAUGAAUGG2000000006ACAAGAAGUGUUUUAUCUGACUUACACCCCUGAAGAUGUCGAAGGGAACGUUCAGCUGGAAACUGGAGAUAAAAUAAACUUUGUAAUUGAUAACAAUAA2000000006ACAUACUGGUGCUGUAAGUGCUCGCAACAUUAUGCUGUUGAAAAAGAA2000000006ACAAGCCCGCUGUCAGGGAGUAGUUUGUGCCAUGAAGGAGGCAUUUGGCU2000000009UUAUUGAAAGAGGUGAUGUUGUAAAAGAGAUAUUCUUUCACUAUAGUGAAUUUAAGGGUGACUUAGAAACCUUACAGCCUGGCGAUGAUGUGGAAUUCACAAUCAAGGACAGAAAUGGUAAAGAAGUUGCAACAGAUGUCAGACUAUUGCCUCAAGGAACAGUCAUUUUUGAAGAUAUCAGCAUUGAACAUUUUGAAGGAACUGUAACCAAAGUUAUCCCAAAAGUACCCAGUAAAAACCAGAAUGACCCAUUGCCAGGACGCAUCAAAGUUGACUUUGUGAUCCCUAAAGAACUUCCCUUUGGAGACAAAGAUACGAAAUCCAAGGUGACCCUGCUGGAAGGUGACCAUGUUAGGUUUAAUAUUUCAACAGACCGACGUGACAAAUUAGAGCGAGCAACCAAUAUAGAAGUUCUGUCAAAUAC2000000006AUUUCAGUUCACUAAUGAAGCCCGAGAAAUGGUAAGUGUUGGAUAUUACUGGAUAUGUAUCUAAUAUGCGAAAGCCAAUGUUAUAUUCAAGUUUAUACUACUAAAUUAAAAUUUUUCUUAAGUUAAAUGACCCUAAUGGGCAUUUACCUUGUUAAGGUGAUUAAGAAUCAUACACAUUUGAGUCAGUCUGGGUUAUCUCUGGCAGUUAUCUUGGAAAUAUAUGUGAAAAAAUUUUUUGAAUGGAAAUCUGGACAGGAUUACUAAGAUAUUUUUAGAGUCAGUGAUUCUCAGGCCCUUAAUAUGAAGAGUAAGAAAAUUCAAGUUCAUCAUUGUAGAAAGUAGAUUUUCCCAAACUAUUUCCUAAGACAUUUAAUUAGUGGUUUCUGUUUUUAGGAAACACAAUUCUUCCUCCAGUGUGGUCCAGGGAAGCCAAAAGAUUGAACACCCAUGAUCUAGACACUAGAUCACACAUAAAAUACACUAACAGCAAUGAUAGCUGAUGAGCUUUUUUAAAAAAAAAAUCAUAGGCACGGUGGCUCACACCUGUAAUCCCAGCACUUUGGGAGGCUGAGGCGGGUGAUCACUUGAGGUCAGGAGUUCAAGACCAGCCUGGCCAACAUGGUAAAACCCCGUCUCUACUAAAAAUAGAAAAAUUAGCCAGGUGUGACGGUGGGCACCUGUAAUCCUAACUACUCAGGAGGCUGAGACAGGAGAAUCGCUUGAACCUAGGAGGCAGAGGUUGCAGUAAGCCAAUACCAUGCCGUUGCCCUGCAACCUGGGUGACAGAGGAAGACUGUCUCAAAAAAAUAAUUGCAAAAACAUCUCAUCAUGUUUUAAGAAGGUUUAACAAUUUGUUGUGUUGGGCCACAUUCAGAGCUGUCCUAGGCCAUGGUUUGGACAAGCUUGCAAUUAAACCAGAGUCAAAAAGGUUUUGUUUUGGCAGAACUUCACAAAUUGUUUUUUAAGAGUUUGUGUCUGGGAGUGGCAUAAACCAACCAGAUUUUUUCCCAAACAUGUUUUAUGAACUCAUUUUCUCAGACAUAAUUUGCAUUUAGUUACGUUUGGGAUCAUAUCAUCUACACUAUAACUCAGUGUUGCCAGUGGAACUGGGUACAUUGAAUGAAAAUUUAAGUUUCUUGAGUUUUUUUUAAUCCUUUGCCUUUGAAGAACUGGUUGUAUUUGACACAGUGUAUUUAACUUUAAAAGUUUGUAAGUCUGAAUGUGUGAUUUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	96	103	130	158	165	198	335	593	750	772	871	919	969	1393
Modification Positions	m6A	Y	Um	m6A	m6A	m6A	Y	Um	Y	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	1:114750191:-	1:114750184:-	1:114750157:-	1:114750129:-	1:114750122:-	1:114750089:-	1:114749952:-	1:114739764:-	1:114737988:-	1:114737966:-	1:114736760:-	1:114734478:-	1:114734104:-	1:114732634:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	93arJtwJmuS9 ArijeGVTwYBw KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	jaSvBXBkn3xs YkSG92k4EHDM	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	6UuHp6YApVKv 8cMbzB4aD5Se KTLz8piFYdwC BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY