General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000306121
Gene ID:	ENSG00000162627
Gene Name:	SNX7
Sequence (UNICHARACTER ENCODING)	GCACUCUCGGGAUGGAGGGCGAGCGCCGGGCAUCGCAGGCGCCCPCCUCGGGCCUCCCGGCCGGGGGCGCCAACGGGGAGAGCCCGGGGGGCGGCGCCCCCUUUCCGGGCAGCAGPGGCUCUUCCGCCCUGCUGCAGGCGGAGGUGCUGGAUCUGGACGAGGACGAGGACGACCUGGAGGUGUUCAGCAAGGAUGCCUCAUUGAUGGACAUGAACUCCUUCAGCCCUAUGAUGCCAACAUCCCCUPUAUCAAUGAUAAACCAAAUCAAGUUUGAGGAUGAACCAGAUUUAAAGGAUCUCUUCAUCACAGUUGAUGAACCUGAAAGUCAUGUUACUACAAUAGAAACUUUCAUUACGUAUAGGAUUAUUACUAAGACAUCUCGUGGGGAAUPUGACUCCAGUGAAUUUGAAGUUAGGAGACGAUAUCAAGAUUUCCUUUGGUUGAAGGGAAAACUGGAAGAAGCACACCCCACUCUGAUUAUUCCACCAUUGCCAGAAAAGUUUAUAGUAAAAGGAAUGGUGGAACGCUPUAACGAUGACUUCAUUGAGACACGCAGGAAGGCUPUACAUAAAUUUUUGAЖCCGAAUUGCUGAUCAPCCAACUPUAЖCAUUUAAUGAAGACUUCAAAAUUUUUCUCACUGCACAAGCUUGGGAACUCUCUUCUCACAAGAAGCAAGGUCCUGGCUUGCUAAGCAGGAUGGGGCAAACCGUCAGAGCUGUUGCGUCCUCAAUGAGAGGAGUUAAAAACCGCCCAGAGGAGUUCAUGGAAAUGAAUAACUPUAUUGAACUAUUUAGCCAGAAAAUAAAUUUGAUAGAUAAAAUAUCUCAGAGAAUUUAUAAGGAAGAAAGGGAAUAUUUUGAUGAAAUGAAAGAAUAUGGCCCAAUUCAUAUUCUGUGGUCAGCGUCAGAAGAGGAUCUGGUUGAUACUCUAAAGGAUGUUGCCAGCUGCAUUGACAGAUGCUGUAAGGCCACUGAAAAGCGGAUGUCUGGACUCUCAGAGGCCCUGCUUCCUGUUGUACЖUGAGUACGUGCUPUAUAGUGAAAUGUUAAUGGGUGUUAUGAAAAGAAGAGACCAAAUACAAGCAGAACUGGAUUCCAAAGUUGAAGUUUUGACCUAUAAAAAGGCAGAUACUGAUCUGCUUCCAGAGGAGAUUGGAAAACUUGAAGAUAAAGUGGAAUGUGCUAAUAAUGCCCUGAAAGCAGAUUGGGAGAGAUGGAAACAAAAUAUGCAAAAUGAUAUCAAGUUAGCAUUUACAGAUAUGGCUGAGGAGAAUAUCCAUUAUUAUGAACAGUGCCUUGCUACGUGGGAGUCAUUCCUUACAUCACAGACCAACCUUCACUUGGAAGAAGCCUCUGAAGAUAAЖCCUUAAUCCCAUUGAGGЖCUUCUGUUUGAUCUUUGGGAGACAGCAUUUAUUAACCAAAGUUAUUCUUUCUGGAUCUGCCGUGUCCUUAUAAAGUGGAUGAAAAAUGUUUUGUACCCAUCUGGAAAACCAACAACUUGAAAUCUCAGGUAUUCCAGGUCACUGACAUGAAUUUGAAGAUAUAUCUAUCUGUAUGGAUAUAUAUCUAUAUGUAUAUAGAUAUAUAAAUACAGAGAGAUAUCUGGCUUGGUUUUAAUUAUGUUCUUAAAUUUGUGUGCCAAUAAUUGCAUAUAGAUUUUUUUUCUUAAAUAUUUGACUGUGGAACAUGCCAUUUUAAAUAUGUUGUAAGGACUGUUUUAAUAAAAAGUUUAGUAUGAA
Sequence (SHORT NAMES ENCODING)	GCACUCUCGGGAUGGAGGGCGAGCGCCGGGCAUCGCAGGCGCCCYCCUCGGGCCUCCCGGCCGGGGGCGCCAACGGGGAGAGCCCGGGGGGCGGCGCCCCCUUUCCGGGCAGCAGYGGCUCUUCCGCCCUGCUGCAGGCGGAGGUGCUGGAUCUGGACGAGGACGAGGACGACCUGGAGGUGUUCAGCAAGGAUGCCUCAUUGAUGGACAUGAACUCCUUCAGCCCUAUGAUGCCAACAUCCCCUYUAUCAAUGAUAAACCAAAUCAAGUUUGAGGAUGAACCAGAUUUAAAGGAUCUCUUCAUCACAGUUGAUGAACCUGAAAGUCAUGUUACUACAAUAGAAACUUUCAUUACGUAUAGGAUUAUUACUAAGACAUCUCGUGGGGAAUYUGACUCCAGUGAAUUUGAAGUUAGGAGACGAUAUCAAGAUUUCCUUUGGUUGAAGGGAAAACUGGAAGAAGCACACCCCACUCUGAUUAUUCCACCAUUGCCAGAAAAGUUUAUAGUAAAAGGAAUGGUGGAACGCUYUAACGAUGACUUCAUUGAGACACGCAGGAAGGCUYUACAUAAAUUUUUGAm6ACCGAAUUGCUGAUCAYCCAACUYUAm6ACAUUUAAUGAAGACUUCAAAAUUUUUCUCACUGCACAAGCUUGGGAACUCUCUUCUCACAAGAAGCAAGGUCCUGGCUUGCUAAGCAGGAUGGGGCAAACCGUCAGAGCUGUUGCGUCCUCAAUGAGAGGAGUUAAAAACCGCCCAGAGGAGUUCAUGGAAAUGAAUAACUYUAUUGAACUAUUUAGCCAGAAAAUAAAUUUGAUAGAUAAAAUAUCUCAGAGAAUUUAUAAGGAAGAAAGGGAAUAUUUUGAUGAAAUGAAAGAAUAUGGCCCAAUUCAUAUUCUGUGGUCAGCGUCAGAAGAGGAUCUGGUUGAUACUCUAAAGGAUGUUGCCAGCUGCAUUGACAGAUGCUGUAAGGCCACUGAAAAGCGGAUGUCUGGACUCUCAGAGGCCCUGCUUCCUGUUGUACm6AUGAGUACGUGCUYUAUAGUGAAAUGUUAAUGGGUGUUAUGAAAAGAAGAGACCAAAUACAAGCAGAACUGGAUUCCAAAGUUGAAGUUUUGACCUAUAAAAAGGCAGAUACUGAUCUGCUUCCAGAGGAGAUUGGAAAACUUGAAGAUAAAGUGGAAUGUGCUAAUAAUGCCCUGAAAGCAGAUUGGGAGAGAUGGAAACAAAAUAUGCAAAAUGAUAUCAAGUUAGCAUUUACAGAUAUGGCUGAGGAGAAUAUCCAUUAUUAUGAACAGUGCCUUGCUACGUGGGAGUCAUUCCUUACAUCACAGACCAACCUUCACUUGGAAGAAGCCUCUGAAGAUAAm6ACCUUAAUCCCAUUGAGGm6ACUUCUGUUUGAUCUUUGGGAGACAGCAUUUAUUAACCAAAGUUAUUCUUUCUGGAUCUGCCGUGUCCUUAUAAAGUGGAUGAAAAAUGUUUUGUACCCAUCUGGAAAACCAACAACUUGAAAUCUCAGGUAUUCCAGGUCACUGACAUGAAUUUGAAGAUAUAUCUAUCUGUAUGGAUAUAUAUCUAUAUGUAUAUAGAUAUAUAAAUACAGAGAGAUAUCUGGCUUGGUUUUAAUUAUGUUCUUAAAUUUGUGUGCCAAUAAUUGCAUAUAGAUUUUUUUUCUUAAAUAUUUGACUGUGGAACAUGCCAUUUUAAAUAUGUUGUAAGGACUGUUUUAAUAAAAAGUUUAGUAUGAA
Sequence (MODOMICS CODE ENCODING)	GCACUCUCGGGAUGGAGGGCGAGCGCCGGGCAUCGCAGGCGCCC2000000009UCCUCGGGCCUCCCGGCCGGGGGCGCCAACGGGGAGAGCCCGGGGGGCGGCGCCCCCUUUCCGGGCAGCAG2000000009UGGCUCUUCCGCCCUGCUGCAGGCGGAGGUGCUGGAUCUGGACGAGGACGAGGACGACCUGGAGGUGUUCAGCAAGGAUGCCUCAUUGAUGGACAUGAACUCCUUCAGCCCUAUGAUGCCAACAUCCCCU2000000009UUAUCAAUGAUAAACCAAAUCAAGUUUGAGGAUGAACCAGAUUUAAAGGAUCUCUUCAUCACAGUUGAUGAACCUGAAAGUCAUGUUACUACAAUAGAAACUUUCAUUACGUAUAGGAUUAUUACUAAGACAUCUCGUGGGGAAU2000000009UUGACUCCAGUGAAUUUGAAGUUAGGAGACGAUAUCAAGAUUUCCUUUGGUUGAAGGGAAAACUGGAAGAAGCACACCCCACUCUGAUUAUUCCACCAUUGCCAGAAAAGUUUAUAGUAAAAGGAAUGGUGGAACGCU2000000009UUAACGAUGACUUCAUUGAGACACGCAGGAAGGCU2000000009UUACAUAAAUUUUUGA2000000006ACCGAAUUGCUGAUCA2000000009UCCAACU2000000009UUA2000000006ACAUUUAAUGAAGACUUCAAAAUUUUUCUCACUGCACAAGCUUGGGAACUCUCUUCUCACAAGAAGCAAGGUCCUGGCUUGCUAAGCAGGAUGGGGCAAACCGUCAGAGCUGUUGCGUCCUCAAUGAGAGGAGUUAAAAACCGCCCAGAGGAGUUCAUGGAAAUGAAUAACU2000000009UUAUUGAACUAUUUAGCCAGAAAAUAAAUUUGAUAGAUAAAAUAUCUCAGAGAAUUUAUAAGGAAGAAAGGGAAUAUUUUGAUGAAAUGAAAGAAUAUGGCCCAAUUCAUAUUCUGUGGUCAGCGUCAGAAGAGGAUCUGGUUGAUACUCUAAAGGAUGUUGCCAGCUGCAUUGACAGAUGCUGUAAGGCCACUGAAAAGCGGAUGUCUGGACUCUCAGAGGCCCUGCUUCCUGUUGUAC2000000006AUGAGUACGUGCU2000000009UUAUAGUGAAAUGUUAAUGGGUGUUAUGAAAAGAAGAGACCAAAUACAAGCAGAACUGGAUUCCAAAGUUGAAGUUUUGACCUAUAAAAAGGCAGAUACUGAUCUGCUUCCAGAGGAGAUUGGAAAACUUGAAGAUAAAGUGGAAUGUGCUAAUAAUGCCCUGAAAGCAGAUUGGGAGAGAUGGAAACAAAAUAUGCAAAAUGAUAUCAAGUUAGCAUUUACAGAUAUGGCUGAGGAGAAUAUCCAUUAUUAUGAACAGUGCCUUGCUACGUGGGAGUCAUUCCUUACAUCACAGACCAACCUUCACUUGGAAGAAGCCUCUGAAGAUAA2000000006ACCUUAAUCCCAUUGAGG2000000006ACUUCUGUUUGAUCUUUGGGAGACAGCAUUUAUUAACCAAAGUUAUUCUUUCUGGAUCUGCCGUGUCCUUAUAAAGUGGAUGAAAAAUGUUUUGUACCCAUCUGGAAAACCAACAACUUGAAAUCUCAGGUAUUCCAGGUCACUGACAUGAAUUUGAAGAUAUAUCUAUCUGUAUGGAUAUAUAUCUAUAUGUAUAUAGAUAUAUAAAUACAGAGAGAUAUCUGGCUUGGUUUUAAUUAUGUUCUUAAAUUUGUGUGCCAAUAAUUGCAUAUAGAUUUUUUUUCUUAAAUAUUUGACUGUGGAACAUGCCAUUUUAAAUAUGUUGUAAGGACUGUUUUAAUAAAAAGUUUAGUAUGAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	45	116	246	391	529	564	580	596	603	606	778	1018	1031	1361	1379
Modification Positions	Y	Y	Y	Y	Y	Y	m6A	Y	Y	m6A	Y	m6A	Y	m6A	m6A
Genomic Coordinates	1:98661765:+	1:98661836:+	1:98684939:+	1:98691091:+	1:98691578:+	1:98691613:+	1:98691629:+	1:98691645:+	1:98691652:+	1:98691655:+	1:98695645:+	1:98698874:+	1:98698887:+	1:98760125:+	1:98760143:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8