General Data

RNA Type	lncRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000415330
Gene ID:	ENSG00000231789
Gene Name:	PIK3CD-AS2
Sequence (UNICHARACTER ENCODING)	GCCCUCCCAUCUCUCCCUCCUUCCUGCCGUCCCCCGCCUGAGGGAGGGGAGCGGUGCAGCAGACAPCCGAGGGCAGCUGGGACCCCCUGACUCAGCCGACGGGUGAGUCAGGCUCCCUGCAGGCCACACCGGACCCCCCCAGGGCGGGGAUUUCCCCAAGAUGAGAAAUCAGCCACCGGAAGUCACGCCGGACCUUGGACGGGCAGACAGAGGCUGGGAGGAGUUCUGGGUGCAGAGCCCCCCAACCUGUGCUCUCAUCUCUUGCUCUGGGGUAAGCCAGUGGCCAUGCUAUAAGGACACUCAAGCCACCCUAUGAAGAAGCCCACAUGAAGAGGAACUGAGAUAUCUGGCCAACAGCCAGCCAGUCACUGAGCCUGCCAACCACGCUGUGGCAGGUACCUCCAGCCCCAGACACCUGCAGCCUCCACUGAAAGCUCAAUGGCAGCCUCAUGAGACCCUGGACCGGAЖCCACCCAACGAAGCGGCUCCUGUAUUCCUGAUUGACAGAAACUACGGGAUCAUAAAUGCUUGCUGUUCAGUCUGCCAAGUGUUGGCGUGAUUUGUUAAACAGCAACCAGUAЖCUAAUACGCCACCCAUGGCUGCCGCGUUCCUGCUGUGGGGCCAGCACUAUUCCAUGCUUAGAGGCUCCAUCAAUACCUGUGAUGGЖCUAAAUGGCACGGUGGCUCACACCUAUAAUCUCACCACUUUGGGAGGCCGAAGUGGGAAGAUUGCUUGAGCCCAGAAGUUGGAGACCAGCCUGGGCAACACAGCAAGACCCCUGUCUCUACCGAAAAUGAAAAAAAUUAGCUGGGCAUGGCAGUGUGCACUUGGGAGCUACUCAGGAGGCUGAAGCGGGAGGAUCACUUGAGCUCAGGAGUUCAAGGCUGCAUUGAGCUAUGAUGGCACCACUGCAGUCCAGCCUAGGAGACAGAGCUAGACCCUGUCUCUAAAAAUAAAUAAAUAAAUAAUCUCGGCAUUUCUCAUCCUAA
Sequence (SHORT NAMES ENCODING)	GCCCUCCCAUCUCUCCCUCCUUCCUGCCGUCCCCCGCCUGAGGGAGGGGAGCGGUGCAGCAGACAYCCGAGGGCAGCUGGGACCCCCUGACUCAGCCGACGGGUGAGUCAGGCUCCCUGCAGGCCACACCGGACCCCCCCAGGGCGGGGAUUUCCCCAAGAUGAGAAAUCAGCCACCGGAAGUCACGCCGGACCUUGGACGGGCAGACAGAGGCUGGGAGGAGUUCUGGGUGCAGAGCCCCCCAACCUGUGCUCUCAUCUCUUGCUCUGGGGUAAGCCAGUGGCCAUGCUAUAAGGACACUCAAGCCACCCUAUGAAGAAGCCCACAUGAAGAGGAACUGAGAUAUCUGGCCAACAGCCAGCCAGUCACUGAGCCUGCCAACCACGCUGUGGCAGGUACCUCCAGCCCCAGACACCUGCAGCCUCCACUGAAAGCUCAAUGGCAGCCUCAUGAGACCCUGGACCGGAm6ACCACCCAACGAAGCGGCUCCUGUAUUCCUGAUUGACAGAAACUACGGGAUCAUAAAUGCUUGCUGUUCAGUCUGCCAAGUGUUGGCGUGAUUUGUUAAACAGCAACCAGUAm6ACUAAUACGCCACCCAUGGCUGCCGCGUUCCUGCUGUGGGGCCAGCACUAUUCCAUGCUUAGAGGCUCCAUCAAUACCUGUGAUGGm6ACUAAAUGGCACGGUGGCUCACACCUAUAAUCUCACCACUUUGGGAGGCCGAAGUGGGAAGAUUGCUUGAGCCCAGAAGUUGGAGACCAGCCUGGGCAACACAGCAAGACCCCUGUCUCUACCGAAAAUGAAAAAAAUUAGCUGGGCAUGGCAGUGUGCACUUGGGAGCUACUCAGGAGGCUGAAGCGGGAGGAUCACUUGAGCUCAGGAGUUCAAGGCUGCAUUGAGCUAUGAUGGCACCACUGCAGUCCAGCCUAGGAGACAGAGCUAGACCCUGUCUCUAAAAAUAAAUAAAUAAAUAAUCUCGGCAUUUCUCAUCCUAA
Sequence (MODOMICS CODE ENCODING)	GCCCUCCCAUCUCUCCCUCCUUCCUGCCGUCCCCCGCCUGAGGGAGGGGAGCGGUGCAGCAGACA2000000009UCCGAGGGCAGCUGGGACCCCCUGACUCAGCCGACGGGUGAGUCAGGCUCCCUGCAGGCCACACCGGACCCCCCCAGGGCGGGGAUUUCCCCAAGAUGAGAAAUCAGCCACCGGAAGUCACGCCGGACCUUGGACGGGCAGACAGAGGCUGGGAGGAGUUCUGGGUGCAGAGCCCCCCAACCUGUGCUCUCAUCUCUUGCUCUGGGGUAAGCCAGUGGCCAUGCUAUAAGGACACUCAAGCCACCCUAUGAAGAAGCCCACAUGAAGAGGAACUGAGAUAUCUGGCCAACAGCCAGCCAGUCACUGAGCCUGCCAACCACGCUGUGGCAGGUACCUCCAGCCCCAGACACCUGCAGCCUCCACUGAAAGCUCAAUGGCAGCCUCAUGAGACCCUGGACCGGA2000000006ACCACCCAACGAAGCGGCUCCUGUAUUCCUGAUUGACAGAAACUACGGGAUCAUAAAUGCUUGCUGUUCAGUCUGCCAAGUGUUGGCGUGAUUUGUUAAACAGCAACCAGUA2000000006ACUAAUACGCCACCCAUGGCUGCCGCGUUCCUGCUGUGGGGCCAGCACUAUUCCAUGCUUAGAGGCUCCAUCAAUACCUGUGAUGG2000000006ACUAAAUGGCACGGUGGCUCACACCUAUAAUCUCACCACUUUGGGAGGCCGAAGUGGGAAGAUUGCUUGAGCCCAGAAGUUGGAGACCAGCCUGGGCAACACAGCAAGACCCCUGUCUCUACCGAAAAUGAAAAAAAUUAGCUGGGCAUGGCAGUGUGCACUUGGGAGCUACUCAGGAGGCUGAAGCGGGAGGAUCACUUGAGCUCAGGAGUUCAAGGCUGCAUUGAGCUAUGAUGGCACCACUGCAGUCCAGCCUAGGAGACAGAGCUAGACCCUGUCUCUAAAAAUAAAUAAAUAAAUAAUCUCGGCAUUUCUCAUCCUAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	66	468	580	666
Modification Positions	Y	m6A	m6A	m6A
Genomic Coordinates	1:9687518:-	1:9680917:-	1:9680805:-	1:9680719:-
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq XWZVGdLC6gGJ JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	msuJfBpJvM5H VyCX26p5UBRL	Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL