General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000451196
Gene ID:	ENSG00000007923
Gene Name:	DNAJC11
Sequence (UNICHARACTER ENCODING)	GCCUCUUCUGAAGAGCUGAAAGCUGCCUACCGGAGGCUCUGUAUGCUCUACCAPCCAGACAAGCACAGAGACCCAGAGCUCAAGUCACAGGCGGAACGACUGUUUAACCUUGUUCACCAGGCUUAUGAAGUGCUUAGUGACCCCCAAACCAGGGCCAUCUAUGAUAUAUAUGGGAAGAGAGGACUGGAAAUGGAAGGAUGGGAGGUUGUGGAAAGGAGGAGAЖCCCCUGCUGAAAUUCGAGAGGAGUUUGAGCGGCUGCAGAGAGAGAGAGAAGAGAGGAGAUUGCAGCAGCGAACCAAUCCCAAGGGAACGAUCAGCGUUGGAGUAGAUGCCACCGACCUUUUUGAUCGCUAUGAUGAGGAGUAUGAAGAUGUGUCCGGCAGUAGCUUUCCGCAGAUUGAAAUUAAUAAAAUGCACAUAUCCCAGUCCAUUGAGGCACCCUUGACAGCGACAGACACAGCCAPCCUCUCUGGAAGCCUCUCAACCCAGAAUGGAAAUGGAGGAGGUUCCAUUAACUUUGCGCUCAGACGAGUAЖCUUCGGCAAAGGGAUGGGGAGAGUUGGAAUUUGGAGCUGGAGЖCCUACAGGGGCCUUUGUUCGGUCUCAAGCUGUUCCGUAAUCUCACACCAAGAUGCUUUGUGACAACAAЖCUGUGCUCUGCAGUUUUCAUCCCGUGGAAUCCGACCCGGCCUGACCACUGUCCUAGCUCGGAACCUAGACAAGAACACCGUGGGCUACCUGCAGUGGCACUGCAGCUCCCCGCUCCUGCAGGUCCAGCGUCCUCACAGGAACACCAGGGCCUGUGCUCCGGAGCCUUCCUUCAGACCCUUCCPCCACGUGCCCACUUGGGAUGCAGAAUGCAGCGGAGCUAGGACCCCCPCCACGGCCUGGACCUCGGCUGCAGUAAAGUUACGUGAGGCCUGUCUCUCGGGGCCUGGAAGUGGCAGCCAUCAGUUGCUCUUGCUGACCCCUCGGAGCAAGCGCCGCACAGGUGGUGGCUGAGACAGCUGGCGCGGGGGGCCCCAAGCUGCGCCGGCCUCCAGCCCACCCACAGCUGUUGCUGAAGUCAGGCCUCCCUCCCCAGCACUGGUAUCUGAGUAACGGCUAAGAЖCCUCCUUCCUCUGGUUUUGAAAAGCAGUUCGGGUUGUCCAAUUCUGUAACAUUCAUCUCCAUUUUUUAAAAAGGUUUCUCUGACGGCCCCACGGCCCGAGCCGCGGUGAGCGUCGUGUUGCAUGAGCCUGGGCCCCGGGCUUCCCGUGCGCCUCUGCCGCAGGUGCUUCUGGGCACCCAPCCUCUGCGUUUCAUUUGCAGUCGACUGUACAGAAGGCACUCACCACAAUAAACCUUUCCUGAAAGCAGA
Sequence (SHORT NAMES ENCODING)	GCCUCUUCUGAAGAGCUGAAAGCUGCCUACCGGAGGCUCUGUAUGCUCUACCAYCCAGACAAGCACAGAGACCCAGAGCUCAAGUCACAGGCGGAACGACUGUUUAACCUUGUUCACCAGGCUUAUGAAGUGCUUAGUGACCCCCAAACCAGGGCCAUCUAUGAUAUAUAUGGGAAGAGAGGACUGGAAAUGGAAGGAUGGGAGGUUGUGGAAAGGAGGAGAm6ACCCCUGCUGAAAUUCGAGAGGAGUUUGAGCGGCUGCAGAGAGAGAGAGAAGAGAGGAGAUUGCAGCAGCGAACCAAUCCCAAGGGAACGAUCAGCGUUGGAGUAGAUGCCACCGACCUUUUUGAUCGCUAUGAUGAGGAGUAUGAAGAUGUGUCCGGCAGUAGCUUUCCGCAGAUUGAAAUUAAUAAAAUGCACAUAUCCCAGUCCAUUGAGGCACCCUUGACAGCGACAGACACAGCCAYCCUCUCUGGAAGCCUCUCAACCCAGAAUGGAAAUGGAGGAGGUUCCAUUAACUUUGCGCUCAGACGAGUAm6ACUUCGGCAAAGGGAUGGGGAGAGUUGGAAUUUGGAGCUGGAGm6ACCUACAGGGGCCUUUGUUCGGUCUCAAGCUGUUCCGUAAUCUCACACCAAGAUGCUUUGUGACAACAAm6ACUGUGCUCUGCAGUUUUCAUCCCGUGGAAUCCGACCCGGCCUGACCACUGUCCUAGCUCGGAACCUAGACAAGAACACCGUGGGCUACCUGCAGUGGCACUGCAGCUCCCCGCUCCUGCAGGUCCAGCGUCCUCACAGGAACACCAGGGCCUGUGCUCCGGAGCCUUCCUUCAGACCCUUCCYCCACGUGCCCACUUGGGAUGCAGAAUGCAGCGGAGCUAGGACCCCCYCCACGGCCUGGACCUCGGCUGCAGUAAAGUUACGUGAGGCCUGUCUCUCGGGGCCUGGAAGUGGCAGCCAUCAGUUGCUCUUGCUGACCCCUCGGAGCAAGCGCCGCACAGGUGGUGGCUGAGACAGCUGGCGCGGGGGGCCCCAAGCUGCGCCGGCCUCCAGCCCACCCACAGCUGUUGCUGAAGUCAGGCCUCCCUCCCCAGCACUGGUAUCUGAGUAACGGCUAAGAm6ACCUCCUUCCUCUGGUUUUGAAAAGCAGUUCGGGUUGUCCAAUUCUGUAACAUUCAUCUCCAUUUUUUAAAAAGGUUUCUCUGACGGCCCCACGGCCCGAGCCGCGGUGAGCGUCGUGUUGCAUGAGCCUGGGCCCCGGGCUUCCCGUGCGCCUCUGCCGCAGGUGCUUCUGGGCACCCAYCCUCUGCGUUUCAUUUGCAGUCGACUGUACAGAAGGCACUCACCACAAUAAACCUUUCCUGAAAGCAGA
Sequence (MODOMICS CODE ENCODING)	GCCUCUUCUGAAGAGCUGAAAGCUGCCUACCGGAGGCUCUGUAUGCUCUACCA2000000009UCCAGACAAGCACAGAGACCCAGAGCUCAAGUCACAGGCGGAACGACUGUUUAACCUUGUUCACCAGGCUUAUGAAGUGCUUAGUGACCCCCAAACCAGGGCCAUCUAUGAUAUAUAUGGGAAGAGAGGACUGGAAAUGGAAGGAUGGGAGGUUGUGGAAAGGAGGAGA2000000006ACCCCUGCUGAAAUUCGAGAGGAGUUUGAGCGGCUGCAGAGAGAGAGAGAAGAGAGGAGAUUGCAGCAGCGAACCAAUCCCAAGGGAACGAUCAGCGUUGGAGUAGAUGCCACCGACCUUUUUGAUCGCUAUGAUGAGGAGUAUGAAGAUGUGUCCGGCAGUAGCUUUCCGCAGAUUGAAAUUAAUAAAAUGCACAUAUCCCAGUCCAUUGAGGCACCCUUGACAGCGACAGACACAGCCA2000000009UCCUCUCUGGAAGCCUCUCAACCCAGAAUGGAAAUGGAGGAGGUUCCAUUAACUUUGCGCUCAGACGAGUA2000000006ACUUCGGCAAAGGGAUGGGGAGAGUUGGAAUUUGGAGCUGGAG2000000006ACCUACAGGGGCCUUUGUUCGGUCUCAAGCUGUUCCGUAAUCUCACACCAAGAUGCUUUGUGACAACAA2000000006ACUGUGCUCUGCAGUUUUCAUCCCGUGGAAUCCGACCCGGCCUGACCACUGUCCUAGCUCGGAACCUAGACAAGAACACCGUGGGCUACCUGCAGUGGCACUGCAGCUCCCCGCUCCUGCAGGUCCAGCGUCCUCACAGGAACACCAGGGCCUGUGCUCCGGAGCCUUCCUUCAGACCCUUCC2000000009UCCACGUGCCCACUUGGGAUGCAGAAUGCAGCGGAGCUAGGACCCCC2000000009UCCACGGCCUGGACCUCGGCUGCAGUAAAGUUACGUGAGGCCUGUCUCUCGGGGCCUGGAAGUGGCAGCCAUCAGUUGCUCUUGCUGACCCCUCGGAGCAAGCGCCGCACAGGUGGUGGCUGAGACAGCUGGCGCGGGGGGCCCCAAGCUGCGCCGGCCUCCAGCCCACCCACAGCUGUUGCUGAAGUCAGGCCUCCCUCCCCAGCACUGGUAUCUGAGUAACGGCUAAGA2000000006ACCUCCUUCCUCUGGUUUUGAAAAGCAGUUCGGGUUGUCCAAUUCUGUAACAUUCAUCUCCAUUUUUUAAAAAGGUUUCUCUGACGGCCCCACGGCCCGAGCCGCGGUGAGCGUCGUGUUGCAUGAGCCUGGGCCCCGGGCUUCCCGUGCGCCUCUGCCGCAGGUGCUUCUGGGCACCCA2000000009UCCUCUGCGUUUCAUUUGCAGUCGACUGUACAGAAGGCACUCACCACAAUAAACCUUUCCUGAAAGCAGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	54	223	464	535	578	647	830	877	1108	1288
Modification Positions	Y	m6A	Y	m6A	m6A	m6A	Y	Y	m6A	Y
Genomic Coordinates	1:6680984:-	1:6667792:-	1:6652923:-	1:6652852:-	1:6651583:-	1:6645964:-	1:6634695:-	1:6634648:-	1:6634417:-	1:6634237:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 Yfn77uLS5tv8	93arJtwJmuS9 BkoLW2CBToyL BtsJQJ3DteUq bXBqJigD9oV3 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KjeH7Nsffuas UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP kx7BHU7ZycYE Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8