General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000234668
Gene ID:	ENSG00000097096
Gene Name:	SYDE2
Sequence (UNICHARACTER ENCODING)	GCGGGGUCCUCUGUGAUACGCAGUGGCAAAGGAGACCGCCAGGAAGGCCCCUCCUUCCUCAGGCCGCCGGCAGUGACAGUCAAGAAGCUGCAGAAGUGGAUGUACAAAGGGCGUCUGCUGUCCCUGGGAAUGAAGGGUCGUGCCCGUGGGACGGCUCCCAAAGUCACAGGAACGCAGGCAGCCUCCCCAAAUGUGGGCGCUUUGAAAGUGCGUGAAAACCGUGUCCUGUCGGUGCCUCCAGACCAAAGAAUUACGCUGACAGAUUUAUUUGAAAAUGCCUAUGGGUCUUCAAUGAAGGGAAGAGAACUUGAAGAGCUGAAGGAUAAUAUUGAAUUCAGAGGUCAUAAGCCACUUAACAGCAUCACUGUUUCAAAGAAACGCAAUUGGCUAUAUCAGAGUACUCUGAGGCCUCUUAAUCUGGAAGAAGAAAAUAAGAAAUGCCAAGAUAGAAGUCAUUUAUCCAUCUCACCUGUGUCUCUACCUAAACAUCAGCUAUCACAGUCUUUCCUCAAAUCAUCUAAAGAGUЖCUGUACAUAUGUGGUAUGUAACGCUACAAЖCUCUUCAUUAUCGAAAAACUGUGCUUUAGAUUUUAAUGAGGAAAAUGAUGCAGAUGAUGAAGGAGAAAUAUGGUACAAUCCCAUUCCUGAGGAUGAUGACCUUGGUAUAUCAAGUGCCUUGAGUUUUGGUGAGGCCGACUCUGCUGUUCUGAAGCUCCCUGCUGUCAAUUUGAGCAUGUUGUCUGGCAGUGACCUGAUGAAAGCAGAGCGGCAUACUGAAGЖCUCACUGUGCUCUUCCGAACAUGCAGGUGAUAUUCAGACCACACGGUCAAAUGGAAUGAAUCCUAUACAUCCUGCCCAUUCCACAGAAUUUGUGCAGCAGUACAAGCAAAAGCUAGGACACAAGACACAAGAAGGUAUAAUGGUGGAGGACAGUCCCAUGUUGAAAUCUCCUUUUGCAGGUUCUGGGAUCCUGGCUGCUACAAAUAGUACUGAAUUGGGAAUUAUGGAACCAUCUUCUCCAAAUCCUAGCCCUGUGAAAAAAGGCAGUUCAAUUAAUUGGUCAUUGCCAGAUAAAAUAAAAUCUCCACGAACUGUGAGGAAACUUUCCAUGAAAAUGAAAAAGUUGCCAGAAUUUAGCCGAAAGCUAAGCGUUAAGGGAACAUUGAAUUAUAUAAACAGUCCAGAUAAUACUCCUUCUUUGUCUAAAUAUAACUGCCGAGAAGUUCAUCAUACUGAUAUUCUGCCCUCUGGGAACACAACCACCGCUGCUAAGAGGAAUGUUAUAAGCCGAUACCAUCUUGAUACCAGUGUAUCCUCCCAGCAGAGCUACCAGAAGAAAAЖCUCUAUGAGUUCUAAGUAUUCCUGCAAAGGUGGUUACCUUAGUGAUGGAGЖCUCACCUGAЖCUUACAACUAAAGCUAGCAAACAUGGAUCUGAAAACAAAUUUGGAAAAGGAAAAGAAAUAAUUUCAAAUAGUUGUAGCAAGAAUGAAAUAGЖCAUUGAUGCUUUUAGGCAUUAUAGCUUUUCUGAUCAACCUAAGUGUUCACAGUACAUAUCUGGGCUCAUGAGUGUACAUUUCUAUGGUGCUGAGGAUUUAAAACCACCUCGGAUAGAUUCAAAAGЖCGUCUUUUGUGCAAUUCAGGUAGAUUCAGUAAACAAAGCAAGAACAGCUUUGCUCACAUGCCGAACAACAUUUUUAGACAUGGAUCACACUUUCAACAUAGAAAUUGAAAAUGCACAACAUUUGAAACUAGUAGUAUUCAGUUGGGAACCCACUCCAAGAAAAAAUCGAGUUUGUUGUCAUGGAЖCUGUUGUUCUUCCCACCUUAUUUAGAGUGACAAAGЖCUCAUCAGUUGGCUGUCAAACUUGAACCUAGAGGUCUUAUUUAUGUGAAAGUGЖCUCUUAUGGAЖCAGUGGGAGAAUUCUCUUCAUGGACUAGAUAUAAACCAAGAACCAAUAAUAUUUGGAGUUGAUAUUCAAAAAGUUGUAGAGAAAGAAAAUAUAGGACUGAUGGUGCCCCUUCUGAUACAGAAAUGUAUUAUGGAAAUUGAAAAGAGAGGCUGUCAGGUAUUAUCUUACUAUGGUUCCCUACUACUUCCUUUAUUGAUUGAUUAAUUGUAAGUCUUGGGGGAAGAAAUUCAAGGUAAUGUAAAAAAAUCAAAUUUAGAUAUUUUACCAUUCCUAUUCUUUAUUUUUAUUCCAUUACUGUUUAGGGUAUAAUUUUUAACUUGACUCAUGUUGUCCAUUAUUGAGAGCAUGCUAGAUGAUUCCACAAAUUUAUAUUGCAACACAGAGCUUCAUGGGUCUUAUAAUUAGAAAUCAGGAUUGCUUCAAAAUGGCAUUAAAAGGAAAAGUCAGAGCUGAUAACAUAGGCAAAGGAUAUUGAUUCUUUAUACUAAUUUUUGUGAUACAUAUUAAGACUAAAAAUUACGUUGAGUUAUUUCUGCUUUAGUACUAUCUGAAUUUAUAAUAUUGGUUGAAAAGUUAAGUUAAAAGACAAUGAGUAAAUAUUAUAAAAUCUGAAAUAUUUAUUUAAUAAACUUAAGCUUAACAUGGAAACUAUAGAAACAGCCUAAGUUAAUGGAAUUUUGCAUUAAGAUACAGAAUACCUGGAUUCUGGUUUCUCCUCCAUUAUUACUUAGCUGUGUCAUGUUGGGCAAGUCACUUAAUCUCUGUGGGUCUUACUUGCUUGUAUCUAUAAAAAUAGAUGGAGUGGCUGGGCAUGGGGGCUCACACCUGUAAUCCCAGCACUUUGGGAGGCCAAGGCGGGCAGAUCACCUGAGGUCAGGAGUUCAAGACCAGCCUGGCCAACAUAGUGAAAACUGUCUCUACUAAAAAUACAAAAAUUAGCCCGACAUGGUGGCGCAUGCCUGUAAUCCCAGCUACUUAGGAGGCUGAUGCAGGAGAAUUGUUUGAACCCAGGAGGUGGACAUUACAGUGAGCCCAGAUUGUGCCACUGCAUUCUAGCCUGGGCGAUAGAGUGAGACUCCGUUGCAAAAAAAAAAA
Sequence (SHORT NAMES ENCODING)	GCGGGGUCCUCUGUGAUACGCAGUGGCAAAGGAGACCGCCAGGAAGGCCCCUCCUUCCUCAGGCCGCCGGCAGUGACAGUCAAGAAGCUGCAGAAGUGGAUGUACAAAGGGCGUCUGCUGUCCCUGGGAAUGAAGGGUCGUGCCCGUGGGACGGCUCCCAAAGUCACAGGAACGCAGGCAGCCUCCCCAAAUGUGGGCGCUUUGAAAGUGCGUGAAAACCGUGUCCUGUCGGUGCCUCCAGACCAAAGAAUUACGCUGACAGAUUUAUUUGAAAAUGCCUAUGGGUCUUCAAUGAAGGGAAGAGAACUUGAAGAGCUGAAGGAUAAUAUUGAAUUCAGAGGUCAUAAGCCACUUAACAGCAUCACUGUUUCAAAGAAACGCAAUUGGCUAUAUCAGAGUACUCUGAGGCCUCUUAAUCUGGAAGAAGAAAAUAAGAAAUGCCAAGAUAGAAGUCAUUUAUCCAUCUCACCUGUGUCUCUACCUAAACAUCAGCUAUCACAGUCUUUCCUCAAAUCAUCUAAAGAGUm6ACUGUACAUAUGUGGUAUGUAACGCUACAAm6ACUCUUCAUUAUCGAAAAACUGUGCUUUAGAUUUUAAUGAGGAAAAUGAUGCAGAUGAUGAAGGAGAAAUAUGGUACAAUCCCAUUCCUGAGGAUGAUGACCUUGGUAUAUCAAGUGCCUUGAGUUUUGGUGAGGCCGACUCUGCUGUUCUGAAGCUCCCUGCUGUCAAUUUGAGCAUGUUGUCUGGCAGUGACCUGAUGAAAGCAGAGCGGCAUACUGAAGm6ACUCACUGUGCUCUUCCGAACAUGCAGGUGAUAUUCAGACCACACGGUCAAAUGGAAUGAAUCCUAUACAUCCUGCCCAUUCCACAGAAUUUGUGCAGCAGUACAAGCAAAAGCUAGGACACAAGACACAAGAAGGUAUAAUGGUGGAGGACAGUCCCAUGUUGAAAUCUCCUUUUGCAGGUUCUGGGAUCCUGGCUGCUACAAAUAGUACUGAAUUGGGAAUUAUGGAACCAUCUUCUCCAAAUCCUAGCCCUGUGAAAAAAGGCAGUUCAAUUAAUUGGUCAUUGCCAGAUAAAAUAAAAUCUCCACGAACUGUGAGGAAACUUUCCAUGAAAAUGAAAAAGUUGCCAGAAUUUAGCCGAAAGCUAAGCGUUAAGGGAACAUUGAAUUAUAUAAACAGUCCAGAUAAUACUCCUUCUUUGUCUAAAUAUAACUGCCGAGAAGUUCAUCAUACUGAUAUUCUGCCCUCUGGGAACACAACCACCGCUGCUAAGAGGAAUGUUAUAAGCCGAUACCAUCUUGAUACCAGUGUAUCCUCCCAGCAGAGCUACCAGAAGAAAAm6ACUCUAUGAGUUCUAAGUAUUCCUGCAAAGGUGGUUACCUUAGUGAUGGAGm6ACUCACCUGAm6ACUUACAACUAAAGCUAGCAAACAUGGAUCUGAAAACAAAUUUGGAAAAGGAAAAGAAAUAAUUUCAAAUAGUUGUAGCAAGAAUGAAAUAGm6ACAUUGAUGCUUUUAGGCAUUAUAGCUUUUCUGAUCAACCUAAGUGUUCACAGUACAUAUCUGGGCUCAUGAGUGUACAUUUCUAUGGUGCUGAGGAUUUAAAACCACCUCGGAUAGAUUCAAAAGm6ACGUCUUUUGUGCAAUUCAGGUAGAUUCAGUAAACAAAGCAAGAACAGCUUUGCUCACAUGCCGAACAACAUUUUUAGACAUGGAUCACACUUUCAACAUAGAAAUUGAAAAUGCACAACAUUUGAAACUAGUAGUAUUCAGUUGGGAACCCACUCCAAGAAAAAAUCGAGUUUGUUGUCAUGGAm6ACUGUUGUUCUUCCCACCUUAUUUAGAGUGACAAAGm6ACUCAUCAGUUGGCUGUCAAACUUGAACCUAGAGGUCUUAUUUAUGUGAAAGUGm6ACUCUUAUGGAm6ACAGUGGGAGAAUUCUCUUCAUGGACUAGAUAUAAACCAAGAACCAAUAAUAUUUGGAGUUGAUAUUCAAAAAGUUGUAGAGAAAGAAAAUAUAGGACUGAUGGUGCCCCUUCUGAUACAGAAAUGUAUUAUGGAAAUUGAAAAGAGAGGCUGUCAGGUAUUAUCUUACUAUGGUUCCCUACUACUUCCUUUAUUGAUUGAUUAAUUGUAAGUCUUGGGGGAAGAAAUUCAAGGUAAUGUAAAAAAAUCAAAUUUAGAUAUUUUACCAUUCCUAUUCUUUAUUUUUAUUCCAUUACUGUUUAGGGUAUAAUUUUUAACUUGACUCAUGUUGUCCAUUAUUGAGAGCAUGCUAGAUGAUUCCACAAAUUUAUAUUGCAACACAGAGCUUCAUGGGUCUUAUAAUUAGAAAUCAGGAUUGCUUCAAAAUGGCAUUAAAAGGAAAAGUCAGAGCUGAUAACAUAGGCAAAGGAUAUUGAUUCUUUAUACUAAUUUUUGUGAUACAUAUUAAGACUAAAAAUUACGUUGAGUUAUUUCUGCUUUAGUACUAUCUGAAUUUAUAAUAUUGGUUGAAAAGUUAAGUUAAAAGACAAUGAGUAAAUAUUAUAAAAUCUGAAAUAUUUAUUUAAUAAACUUAAGCUUAACAUGGAAACUAUAGAAACAGCCUAAGUUAAUGGAAUUUUGCAUUAAGAUACAGAAUACCUGGAUUCUGGUUUCUCCUCCAUUAUUACUUAGCUGUGUCAUGUUGGGCAAGUCACUUAAUCUCUGUGGGUCUUACUUGCUUGUAUCUAUAAAAAUAGAUGGAGUGGCUGGGCAUGGGGGCUCACACCUGUAAUCCCAGCACUUUGGGAGGCCAAGGCGGGCAGAUCACCUGAGGUCAGGAGUUCAAGACCAGCCUGGCCAACAUAGUGAAAACUGUCUCUACUAAAAAUACAAAAAUUAGCCCGACAUGGUGGCGCAUGCCUGUAAUCCCAGCUACUUAGGAGGCUGAUGCAGGAGAAUUGUUUGAACCCAGGAGGUGGACAUUACAGUGAGCCCAGAUUGUGCCACUGCAUUCUAGCCUGGGCGAUAGAGUGAGACUCCGUUGCAAAAAAAAAAA
Sequence (MODOMICS CODE ENCODING)	GCGGGGUCCUCUGUGAUACGCAGUGGCAAAGGAGACCGCCAGGAAGGCCCCUCCUUCCUCAGGCCGCCGGCAGUGACAGUCAAGAAGCUGCAGAAGUGGAUGUACAAAGGGCGUCUGCUGUCCCUGGGAAUGAAGGGUCGUGCCCGUGGGACGGCUCCCAAAGUCACAGGAACGCAGGCAGCCUCCCCAAAUGUGGGCGCUUUGAAAGUGCGUGAAAACCGUGUCCUGUCGGUGCCUCCAGACCAAAGAAUUACGCUGACAGAUUUAUUUGAAAAUGCCUAUGGGUCUUCAAUGAAGGGAAGAGAACUUGAAGAGCUGAAGGAUAAUAUUGAAUUCAGAGGUCAUAAGCCACUUAACAGCAUCACUGUUUCAAAGAAACGCAAUUGGCUAUAUCAGAGUACUCUGAGGCCUCUUAAUCUGGAAGAAGAAAAUAAGAAAUGCCAAGAUAGAAGUCAUUUAUCCAUCUCACCUGUGUCUCUACCUAAACAUCAGCUAUCACAGUCUUUCCUCAAAUCAUCUAAAGAGU2000000006ACUGUACAUAUGUGGUAUGUAACGCUACAA2000000006ACUCUUCAUUAUCGAAAAACUGUGCUUUAGAUUUUAAUGAGGAAAAUGAUGCAGAUGAUGAAGGAGAAAUAUGGUACAAUCCCAUUCCUGAGGAUGAUGACCUUGGUAUAUCAAGUGCCUUGAGUUUUGGUGAGGCCGACUCUGCUGUUCUGAAGCUCCCUGCUGUCAAUUUGAGCAUGUUGUCUGGCAGUGACCUGAUGAAAGCAGAGCGGCAUACUGAAG2000000006ACUCACUGUGCUCUUCCGAACAUGCAGGUGAUAUUCAGACCACACGGUCAAAUGGAAUGAAUCCUAUACAUCCUGCCCAUUCCACAGAAUUUGUGCAGCAGUACAAGCAAAAGCUAGGACACAAGACACAAGAAGGUAUAAUGGUGGAGGACAGUCCCAUGUUGAAAUCUCCUUUUGCAGGUUCUGGGAUCCUGGCUGCUACAAAUAGUACUGAAUUGGGAAUUAUGGAACCAUCUUCUCCAAAUCCUAGCCCUGUGAAAAAAGGCAGUUCAAUUAAUUGGUCAUUGCCAGAUAAAAUAAAAUCUCCACGAACUGUGAGGAAACUUUCCAUGAAAAUGAAAAAGUUGCCAGAAUUUAGCCGAAAGCUAAGCGUUAAGGGAACAUUGAAUUAUAUAAACAGUCCAGAUAAUACUCCUUCUUUGUCUAAAUAUAACUGCCGAGAAGUUCAUCAUACUGAUAUUCUGCCCUCUGGGAACACAACCACCGCUGCUAAGAGGAAUGUUAUAAGCCGAUACCAUCUUGAUACCAGUGUAUCCUCCCAGCAGAGCUACCAGAAGAAAA2000000006ACUCUAUGAGUUCUAAGUAUUCCUGCAAAGGUGGUUACCUUAGUGAUGGAG2000000006ACUCACCUGA2000000006ACUUACAACUAAAGCUAGCAAACAUGGAUCUGAAAACAAAUUUGGAAAAGGAAAAGAAAUAAUUUCAAAUAGUUGUAGCAAGAAUGAAAUAG2000000006ACAUUGAUGCUUUUAGGCAUUAUAGCUUUUCUGAUCAACCUAAGUGUUCACAGUACAUAUCUGGGCUCAUGAGUGUACAUUUCUAUGGUGCUGAGGAUUUAAAACCACCUCGGAUAGAUUCAAAAG2000000006ACGUCUUUUGUGCAAUUCAGGUAGAUUCAGUAAACAAAGCAAGAACAGCUUUGCUCACAUGCCGAACAACAUUUUUAGACAUGGAUCACACUUUCAACAUAGAAAUUGAAAAUGCACAACAUUUGAAACUAGUAGUAUUCAGUUGGGAACCCACUCCAAGAAAAAAUCGAGUUUGUUGUCAUGGA2000000006ACUGUUGUUCUUCCCACCUUAUUUAGAGUGACAAAG2000000006ACUCAUCAGUUGGCUGUCAAACUUGAACCUAGAGGUCUUAUUUAUGUGAAAGUG2000000006ACUCUUAUGGA2000000006ACAGUGGGAGAAUUCUCUUCAUGGACUAGAUAUAAACCAAGAACCAAUAAUAUUUGGAGUUGAUAUUCAAAAAGUUGUAGAGAAAGAAAAUAUAGGACUGAUGGUGCCCCUUCUGAUACAGAAAUGUAUUAUGGAAAUUGAAAAGAGAGGCUGUCAGGUAUUAUCUUACUAUGGUUCCCUACUACUUCCUUUAUUGAUUGAUUAAUUGUAAGUCUUGGGGGAAGAAAUUCAAGGUAAUGUAAAAAAAUCAAAUUUAGAUAUUUUACCAUUCCUAUUCUUUAUUUUUAUUCCAUUACUGUUUAGGGUAUAAUUUUUAACUUGACUCAUGUUGUCCAUUAUUGAGAGCAUGCUAGAUGAUUCCACAAAUUUAUAUUGCAACACAGAGCUUCAUGGGUCUUAUAAUUAGAAAUCAGGAUUGCUUCAAAAUGGCAUUAAAAGGAAAAGUCAGAGCUGAUAACAUAGGCAAAGGAUAUUGAUUCUUUAUACUAAUUUUUGUGAUACAUAUUAAGACUAAAAAUUACGUUGAGUUAUUUCUGCUUUAGUACUAUCUGAAUUUAUAAUAUUGGUUGAAAAGUUAAGUUAAAAGACAAUGAGUAAAUAUUAUAAAAUCUGAAAUAUUUAUUUAAUAAACUUAAGCUUAACAUGGAAACUAUAGAAACAGCCUAAGUUAAUGGAAUUUUGCAUUAAGAUACAGAAUACCUGGAUUCUGGUUUCUCCUCCAUUAUUACUUAGCUGUGUCAUGUUGGGCAAGUCACUUAAUCUCUGUGGGUCUUACUUGCUUGUAUCUAUAAAAAUAGAUGGAGUGGCUGGGCAUGGGGGCUCACACCUGUAAUCCCAGCACUUUGGGAGGCCAAGGCGGGCAGAUCACCUGAGGUCAGGAGUUCAAGACCAGCCUGGCCAACAUAGUGAAAACUGUCUCUACUAAAAAUACAAAAAUUAGCCCGACAUGGUGGCGCAUGCCUGUAAUCCCAGCUACUUAGGAGGCUGAUGCAGGAGAAUUGUUUGAACCCAGGAGGUGGACAUUACAGUGAGCCCAGAUUGUGCCACUGCAUUCUAGCCUGGGCGAUAGAGUGAGACUCCGUUGCAAAAAAAAAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	527	557	779	1340	1391	1401	1493	1619	1804	1840	1894	1905
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A
Genomic Coordinates	1:85190488:-	1:85190458:-	1:85190236:-	1:85182819:-	1:85182768:-	1:85182758:-	1:85182666:-	1:85182540:-	1:85182355:-	1:85182319:-	1:85182265:-	1:85182254:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	Lny8GcCeVGc9 UKen6WEino9G	Lny8GcCeVGc9 UKen6WEino9G	gZuvgwMuBfgh msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9	msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn UKen6WEino9G	Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VyCX26p5UBRL Lny8GcCeVGc9	msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	Mg9GixDBFQAT msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VyCX26p5UBRL BkoLW2CBToyL Lny8GcCeVGc9 UKen6WEino9G	msuJfBpJvM5H VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 UKen6WEino9G