General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000611008
Gene ID:	ENSG00000120948
Gene Name:	TARDBP
Sequence (UNICHARACTER ENCODING)	GGAAGAGCUAAAGGAAUUUUAUAAGUUUUGUUACЖUGAAAGGUUGAAAUAUUGAGUGGUUGAAAGUGAЖCUGCUGUUUGCCUGAUUGGUAAACCAACACACUACAAUUGAUAUCAAAAGGUUUCUCCUGUAAUAUUUUAUCCCUGGЖCUUGUCAAGUGAAUUCUUUGCAUGUUCAAAACGGAAACCAUUGAUUAGAACUACAUUCUPUACCCCUUGUUUUAAUUUGAACCCCACCAUAUGGAUUUUUUUCCUUAAGAAAAUCUCCUUUUAGGAGAUCAUGGUGUCACAGUGUUUGGUUCUUUUGUUUUGUUUUUUAЖCACUUGUCUCCCCUCAUACACAAAAGUACAAUAUGAAGCCUUCAUUUAAUCUCUGCAGUUCAUCUCAUUUCAAAUGUUUAUGGAAGAAGCACUUCAUUGAAAGUAGUGCUGUAAAUAUUCUGCCAUAGGAAUACUGUCUACAUGCUUUCUCAUUCAAGAAUUCGUCAUCACGCAUCACAGGCCGCGUCUUUGACGUUUUGAAUAAGUCUGGGUGACCGCACCUAAAAUGCACUUGCACUAUUACUCAGCAGCAGUAЖCAUGGUAЖCACUUAAAAUGGUACUCGGGGACCUCCAAAGACUAAACUGACAAGCCUUCAAGGAGCCCAGGGGUAAGUUAЖCUUGUCAACGGCAUGGUUUAAUCCCUUCUPUACACUUGUGUAAAUUUCAGUUACUGGUCAUAGAAGGCUUUCAAUGUUGAGUGGCCUUUUAUUAACAUGUUUAUGGUACUGCAUAGAUACGGGUAUUUAUUUUACCCUAAGAAGAUUUUGAAGUUUAAAAGUACUUAAACUAUUUGGCAAAGAUUUGUUUUUAAAAAUCUAUUUGGUCAAUCUAAAUGCAUUCAUUCUAAAAAAUUUUUUGAACCAGAUAAAUAAAAUUUUUUUUUGACACCACA
Sequence (SHORT NAMES ENCODING)	GGAAGAGCUAAAGGAAUUUUAUAAGUUUUGUUACm6AUGAAAGGUUGAAAUAUUGAGUGGUUGAAAGUGAm6ACUGCUGUUUGCCUGAUUGGUAAACCAACACACUACAAUUGAUAUCAAAAGGUUUCUCCUGUAAUAUUUUAUCCCUGGm6ACUUGUCAAGUGAAUUCUUUGCAUGUUCAAAACGGAAACCAUUGAUUAGAACUACAUUCUYUACCCCUUGUUUUAAUUUGAACCCCACCAUAUGGAUUUUUUUCCUUAAGAAAAUCUCCUUUUAGGAGAUCAUGGUGUCACAGUGUUUGGUUCUUUUGUUUUGUUUUUUAm6ACACUUGUCUCCCCUCAUACACAAAAGUACAAUAUGAAGCCUUCAUUUAAUCUCUGCAGUUCAUCUCAUUUCAAAUGUUUAUGGAAGAAGCACUUCAUUGAAAGUAGUGCUGUAAAUAUUCUGCCAUAGGAAUACUGUCUACAUGCUUUCUCAUUCAAGAAUUCGUCAUCACGCAUCACAGGCCGCGUCUUUGACGUUUUGAAUAAGUCUGGGUGACCGCACCUAAAAUGCACUUGCACUAUUACUCAGCAGCAGUAm6ACAUGGUAm6ACACUUAAAAUGGUACUCGGGGACCUCCAAAGACUAAACUGACAAGCCUUCAAGGAGCCCAGGGGUAAGUUAm6ACUUGUCAACGGCAUGGUUUAAUCCCUUCUYUACACUUGUGUAAAUUUCAGUUACUGGUCAUAGAAGGCUUUCAAUGUUGAGUGGCCUUUUAUUAACAUGUUUAUGGUACUGCAUAGAUACGGGUAUUUAUUUUACCCUAAGAAGAUUUUGAAGUUUAAAAGUACUUAAACUAUUUGGCAAAGAUUUGUUUUUAAAAAUCUAUUUGGUCAAUCUAAAUGCAUUCAUUCUAAAAAAUUUUUUGAACCAGAUAAAUAAAAUUUUUUUUUGACACCACA
Sequence (MODOMICS CODE ENCODING)	GGAAGAGCUAAAGGAAUUUUAUAAGUUUUGUUAC2000000006AUGAAAGGUUGAAAUAUUGAGUGGUUGAAAGUGA2000000006ACUGCUGUUUGCCUGAUUGGUAAACCAACACACUACAAUUGAUAUCAAAAGGUUUCUCCUGUAAUAUUUUAUCCCUGG2000000006ACUUGUCAAGUGAAUUCUUUGCAUGUUCAAAACGGAAACCAUUGAUUAGAACUACAUUCU2000000009UUACCCCUUGUUUUAAUUUGAACCCCACCAUAUGGAUUUUUUUCCUUAAGAAAAUCUCCUUUUAGGAGAUCAUGGUGUCACAGUGUUUGGUUCUUUUGUUUUGUUUUUUA2000000006ACACUUGUCUCCCCUCAUACACAAAAGUACAAUAUGAAGCCUUCAUUUAAUCUCUGCAGUUCAUCUCAUUUCAAAUGUUUAUGGAAGAAGCACUUCAUUGAAAGUAGUGCUGUAAAUAUUCUGCCAUAGGAAUACUGUCUACAUGCUUUCUCAUUCAAGAAUUCGUCAUCACGCAUCACAGGCCGCGUCUUUGACGUUUUGAAUAAGUCUGGGUGACCGCACCUAAAAUGCACUUGCACUAUUACUCAGCAGCAGUA2000000006ACAUGGUA2000000006ACACUUAAAAUGGUACUCGGGGACCUCCAAAGACUAAACUGACAAGCCUUCAAGGAGCCCAGGGGUAAGUUA2000000006ACUUGUCAACGGCAUGGUUUAAUCCCUUCU2000000009UUACACUUGUGUAAAUUUCAGUUACUGGUCAUAGAAGGCUUUCAAUGUUGAGUGGCCUUUUAUUAACAUGUUUAUGGUACUGCAUAGAUACGGGUAUUUAUUUUACCCUAAGAAGAUUUUGAAGUUUAAAAGUACUUAAACUAUUUGGCAAAGAUUUGUUUUUAAAAAUCUAUUUGGUCAAUCUAAAUGCAUUCAUUCUAAAAAAUUUUUUGAACCAGAUAAAUAAAAUUUUUUUUUGACACCACA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	35	69	147	207	317	574	582	654	684
Modification Positions	m6A	m6A	m6A	Y	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	1:11022852:+	1:11022886:+	1:11022964:+	1:11023024:+	1:11023134:+	1:11025137:+	1:11025145:+	1:11025217:+	1:11025247:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	8cMbzB4aD5Se KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv Ap2q43bQLNek gBgcfFQ5WN9C jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U D6ncpa2PPWj3 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8