General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000370792
Gene ID:	ENSG00000077254
Gene Name:	USP33
Sequence (UNICHARACTER ENCODING)	GGAGACACCGGAAGGAGCCGCGGCUGCUGCGGGAAGUGGCCAGUUCAGGAGGCGGACCCCCCGAGGGCAGCGCUGCGGGGCCGUUUUCCGGCCCUCCUGACGCGACACUGCCCCUCUCCGAGAGCUGAGAAGGAAAAGAGGAGCUUGCGGAGGUGCGGCUGCAGGCCGUUGUUGGUCGAGCUGGCGGGUCCCGCGGGCCAGGCCGUGGAGAGCUCCUGAAGGAAGCACUAAACAUGGAAAGGAACAACCGGUACCAGCCACUGCAAAAACAUGCCAAAUUGUAAAGACCAUCGAUGUUAGGAAGAAACUGCCUCAACUAAUGAGCAAAAUAACCAGCUAACAUCGUAAUGACAGGAUCAAAUUCACACAUAACGAUAUUAACCUUAAAGGUGUUACCUCAUUUUGAAAGUCUUGGGAAACAGGAAAAAAUUCCUAACAAAAUGUCAGCUUUUCGAAAUCAUUGUCCACAUUUGGAUUCAGUUGGUGAAAUAACAAAAGAAGAUUUGAUACAAAAAUCCCUUGGUACUUGUCAGGAUUGUAAAGUCCAAGGACCAAAUCUUUGGGCAUGUCUGGAGAAUAGAUGUUCAUAUGUUGGCUGUGGUGAAUCACAAGUAGAUCACAGCACCAUACAUUCUCAGGAGACAAAGCAUUAUCUAACUGUGAACCUUACCACUCUUCGAGUAUGGUGUUAUGCUUGCAGCAAAGAAGUAUUUUUGGAUAGGAAAUUAGGAACUCAGCCUUCAUUGCCUCAUGUAAGACAACCUCACCAAAUACAAGAAAACAGUGUCCAGGAUUUUAAAAUACCCAGUAAUACAACAUUAAAAACUCCUCUGGUUGCCGUAUUUGAUGAUCUGGAUAUAGAAGCGGAUGAAGAAGAUGAACUUAGGGCCAGAGGUCUUACAGGUUUGAAAAAUAUUGGAAAUACUUGUUACAUGAAUGCAGCUUUGCAGGCUCUUUCUAAUUGCCCACCUUUGACACAGUUUUUUCUUGAUUGUGGAGGACUAGCUCGAACAGAUAAGAAACCUGCCAUUUGUAAAAGUUAUCUCAAACUAAUGACAGAGCUGUGGCAUAAAAGCAGGCCAGGAUCUGUUGUGCCUACUACUCUGUUUCAAGGAAUUAAAACUGUAAAUCCAACAUUUCGGGGGUAUUCUCAGCAGGAUGCUCAAGAAUUCCUUCGAUGUUUAAUGGAUUUGCUUCAUGAAGAAUUGAAAGAGCAAGUCAUGGAAGUAGAAGAAGAUCCGCAAACCAUAACCACUGAGGAGACAAUGGAAGAAGACAAGAGCCAGUCGGAUGUAGAUUUUCAGUCUUGUGAAUCUUGUAGCAACAGUGAUAGAGCAGAAAAUGAAAAUGGCUCUAGAUGCUUUUCUGAAGAUAAUAAUGAAACAACAAUGUUAAUUCAGGAUGAUGAAAACAAUUCAGAAAUGUCAAAGGAUUGGCAAAAAGAGAAGAUGUGCAAUAAGAUUAAUAAAGUAAAUUCUGAAGGCGAAUUUGAUAAAGAUAGAGЖCUCUAUAUCUGAAACAGUCGACUUAAACAACCAGGAAACUGUCAAAGUGCAAAUACACAGCAGAGCUUCAGAAUAUAUCACUGAUGUCCAUUCGAAUGACCUGUCUACACCACAGAUCCUUCCAUCAAAUGAAGGUGUUAAUCCACGUUUAUCGGCAAGCCCUCCUAAAUCAGGCAAUUUGUGGCCAGGAUUGGCACCACCACACAAAAAAGCUCAGUCUGCAUCUCCAAAGAGAAAAAAACAGCACAAGAAAUACAGAAGUGUUAUUUCAGACAUAUUUGAUGGAACAAUCAUUAGUUCAGUGCAGUGUCUGACUUGUGACAGGGUGUCUGUAACCCUCGAGACCUUUCAAGAUCUGUCCUUGCCAAUUCCUGGCAAGGAAGACCUUGCUAAGCUGCAUUCAUCAAGUCAPCCAACUUCUAUAGUCAAAGCAGGAUCAUGUGGCGAAGCAUAUGCUCCACAAGGGUGGAUAGCUUUUUUCAUGGAAUAUGUGAAGAGCUGGUUUUGGGGUCCAGUAGUAACCUUGCAAGAUUGUCUUGCUGCCUUCUUUGCCAGAGAUGAACUAAAAGGUGACAAUAUGUACAGUUGUGAAAAAUGCAAAAAGUUGAGAAAUGGAGUGAAGUUUUGUAAAGUACAAAACUUUCCUGAGAUUUUGUGCAUCCACCUUAAAAGAUUCAGACAUGAACUAAUGUUUUCCACCAAAAUCAGUACCCAUGUUUCAUUUCCGCUAGAAGGCUUGGAUCUUCAGCCAUUUCUUGCUAAGGAUAGUCCAGCUCAAAUUGUGACAUAUGAUCUUCUGUCAGUCAUUUGCCAUCAUGGAACUGCAAGUAGUGGACACUAUAUAGCCUACUGCCGAAACAAUCUAAAUAAUCUCUGGUAUGAAUUUGAUGAUCAGAGUGUCACUGAAGUUUCAGAAUCUACUGUACAAAAUGCAGAAGCUUACGUUCUUUUCUAUAGGAAGAGCAGCGAAGAGGCACAAAAAGAGAGGAGAAGGAUAUCAAAUUUAUUGAACAUAAUGGAACCAAGCCUCCUUCAGUUUUAUAUUUCUCGACAGUGGCUUAAUAAAUUUAAGACCUUUGCCGAACCUGGCCCUAUUUCAAAUAAUGACUUUCUUUGUAUUCAUGGAGGUGUUCCPCCAAGAAAAGCUGGUUAUAUUGAAGACCUGGUUUUGAUGCUGCCUCAGAACAUUUGGGAUAACCUAUAUAGCAGGUAUGGUGGAGGACCAGCUGUCAACCAUCUGUACAUUUGUCAUACUUGCCAAAUUGAGGCGGAGAAAAUUGAAAAAAGAAGAAAAACUGAAUUGGAAAUUUUUAUUCGGGUAAAAAAGUGAUGCUUUUCAAAUUGAUCUAGGAUAAAGAUGAAGACCUGACAAUUAUCAGAGUUAUAUGAUAUUAAUAAAAUGAUUAGAUGAAA
Sequence (SHORT NAMES ENCODING)	GGAGACACCGGAAGGAGCCGCGGCUGCUGCGGGAAGUGGCCAGUUCAGGAGGCGGACCCCCCGAGGGCAGCGCUGCGGGGCCGUUUUCCGGCCCUCCUGACGCGACACUGCCCCUCUCCGAGAGCUGAGAAGGAAAAGAGGAGCUUGCGGAGGUGCGGCUGCAGGCCGUUGUUGGUCGAGCUGGCGGGUCCCGCGGGCCAGGCCGUGGAGAGCUCCUGAAGGAAGCACUAAACAUGGAAAGGAACAACCGGUACCAGCCACUGCAAAAACAUGCCAAAUUGUAAAGACCAUCGAUGUUAGGAAGAAACUGCCUCAACUAAUGAGCAAAAUAACCAGCUAACAUCGUAAUGACAGGAUCAAAUUCACACAUAACGAUAUUAACCUUAAAGGUGUUACCUCAUUUUGAAAGUCUUGGGAAACAGGAAAAAAUUCCUAACAAAAUGUCAGCUUUUCGAAAUCAUUGUCCACAUUUGGAUUCAGUUGGUGAAAUAACAAAAGAAGAUUUGAUACAAAAAUCCCUUGGUACUUGUCAGGAUUGUAAAGUCCAAGGACCAAAUCUUUGGGCAUGUCUGGAGAAUAGAUGUUCAUAUGUUGGCUGUGGUGAAUCACAAGUAGAUCACAGCACCAUACAUUCUCAGGAGACAAAGCAUUAUCUAACUGUGAACCUUACCACUCUUCGAGUAUGGUGUUAUGCUUGCAGCAAAGAAGUAUUUUUGGAUAGGAAAUUAGGAACUCAGCCUUCAUUGCCUCAUGUAAGACAACCUCACCAAAUACAAGAAAACAGUGUCCAGGAUUUUAAAAUACCCAGUAAUACAACAUUAAAAACUCCUCUGGUUGCCGUAUUUGAUGAUCUGGAUAUAGAAGCGGAUGAAGAAGAUGAACUUAGGGCCAGAGGUCUUACAGGUUUGAAAAAUAUUGGAAAUACUUGUUACAUGAAUGCAGCUUUGCAGGCUCUUUCUAAUUGCCCACCUUUGACACAGUUUUUUCUUGAUUGUGGAGGACUAGCUCGAACAGAUAAGAAACCUGCCAUUUGUAAAAGUUAUCUCAAACUAAUGACAGAGCUGUGGCAUAAAAGCAGGCCAGGAUCUGUUGUGCCUACUACUCUGUUUCAAGGAAUUAAAACUGUAAAUCCAACAUUUCGGGGGUAUUCUCAGCAGGAUGCUCAAGAAUUCCUUCGAUGUUUAAUGGAUUUGCUUCAUGAAGAAUUGAAAGAGCAAGUCAUGGAAGUAGAAGAAGAUCCGCAAACCAUAACCACUGAGGAGACAAUGGAAGAAGACAAGAGCCAGUCGGAUGUAGAUUUUCAGUCUUGUGAAUCUUGUAGCAACAGUGAUAGAGCAGAAAAUGAAAAUGGCUCUAGAUGCUUUUCUGAAGAUAAUAAUGAAACAACAAUGUUAAUUCAGGAUGAUGAAAACAAUUCAGAAAUGUCAAAGGAUUGGCAAAAAGAGAAGAUGUGCAAUAAGAUUAAUAAAGUAAAUUCUGAAGGCGAAUUUGAUAAAGAUAGAGm6ACUCUAUAUCUGAAACAGUCGACUUAAACAACCAGGAAACUGUCAAAGUGCAAAUACACAGCAGAGCUUCAGAAUAUAUCACUGAUGUCCAUUCGAAUGACCUGUCUACACCACAGAUCCUUCCAUCAAAUGAAGGUGUUAAUCCACGUUUAUCGGCAAGCCCUCCUAAAUCAGGCAAUUUGUGGCCAGGAUUGGCACCACCACACAAAAAAGCUCAGUCUGCAUCUCCAAAGAGAAAAAAACAGCACAAGAAAUACAGAAGUGUUAUUUCAGACAUAUUUGAUGGAACAAUCAUUAGUUCAGUGCAGUGUCUGACUUGUGACAGGGUGUCUGUAACCCUCGAGACCUUUCAAGAUCUGUCCUUGCCAAUUCCUGGCAAGGAAGACCUUGCUAAGCUGCAUUCAUCAAGUCAYCCAACUUCUAUAGUCAAAGCAGGAUCAUGUGGCGAAGCAUAUGCUCCACAAGGGUGGAUAGCUUUUUUCAUGGAAUAUGUGAAGAGCUGGUUUUGGGGUCCAGUAGUAACCUUGCAAGAUUGUCUUGCUGCCUUCUUUGCCAGAGAUGAACUAAAAGGUGACAAUAUGUACAGUUGUGAAAAAUGCAAAAAGUUGAGAAAUGGAGUGAAGUUUUGUAAAGUACAAAACUUUCCUGAGAUUUUGUGCAUCCACCUUAAAAGAUUCAGACAUGAACUAAUGUUUUCCACCAAAAUCAGUACCCAUGUUUCAUUUCCGCUAGAAGGCUUGGAUCUUCAGCCAUUUCUUGCUAAGGAUAGUCCAGCUCAAAUUGUGACAUAUGAUCUUCUGUCAGUCAUUUGCCAUCAUGGAACUGCAAGUAGUGGACACUAUAUAGCCUACUGCCGAAACAAUCUAAAUAAUCUCUGGUAUGAAUUUGAUGAUCAGAGUGUCACUGAAGUUUCAGAAUCUACUGUACAAAAUGCAGAAGCUUACGUUCUUUUCUAUAGGAAGAGCAGCGAAGAGGCACAAAAAGAGAGGAGAAGGAUAUCAAAUUUAUUGAACAUAAUGGAACCAAGCCUCCUUCAGUUUUAUAUUUCUCGACAGUGGCUUAAUAAAUUUAAGACCUUUGCCGAACCUGGCCCUAUUUCAAAUAAUGACUUUCUUUGUAUUCAUGGAGGUGUUCCYCCAAGAAAAGCUGGUUAUAUUGAAGACCUGGUUUUGAUGCUGCCUCAGAACAUUUGGGAUAACCUAUAUAGCAGGUAUGGUGGAGGACCAGCUGUCAACCAUCUGUACAUUUGUCAUACUUGCCAAAUUGAGGCGGAGAAAAUUGAAAAAAGAAGAAAAACUGAAUUGGAAAUUUUUAUUCGGGUAAAAAAGUGAUGCUUUUCAAAUUGAUCUAGGAUAAAGAUGAAGACCUGACAAUUAUCAGAGUUAUAUGAUAUUAAUAAAAUGAUUAGAUGAAA
Sequence (MODOMICS CODE ENCODING)	GGAGACACCGGAAGGAGCCGCGGCUGCUGCGGGAAGUGGCCAGUUCAGGAGGCGGACCCCCCGAGGGCAGCGCUGCGGGGCCGUUUUCCGGCCCUCCUGACGCGACACUGCCCCUCUCCGAGAGCUGAGAAGGAAAAGAGGAGCUUGCGGAGGUGCGGCUGCAGGCCGUUGUUGGUCGAGCUGGCGGGUCCCGCGGGCCAGGCCGUGGAGAGCUCCUGAAGGAAGCACUAAACAUGGAAAGGAACAACCGGUACCAGCCACUGCAAAAACAUGCCAAAUUGUAAAGACCAUCGAUGUUAGGAAGAAACUGCCUCAACUAAUGAGCAAAAUAACCAGCUAACAUCGUAAUGACAGGAUCAAAUUCACACAUAACGAUAUUAACCUUAAAGGUGUUACCUCAUUUUGAAAGUCUUGGGAAACAGGAAAAAAUUCCUAACAAAAUGUCAGCUUUUCGAAAUCAUUGUCCACAUUUGGAUUCAGUUGGUGAAAUAACAAAAGAAGAUUUGAUACAAAAAUCCCUUGGUACUUGUCAGGAUUGUAAAGUCCAAGGACCAAAUCUUUGGGCAUGUCUGGAGAAUAGAUGUUCAUAUGUUGGCUGUGGUGAAUCACAAGUAGAUCACAGCACCAUACAUUCUCAGGAGACAAAGCAUUAUCUAACUGUGAACCUUACCACUCUUCGAGUAUGGUGUUAUGCUUGCAGCAAAGAAGUAUUUUUGGAUAGGAAAUUAGGAACUCAGCCUUCAUUGCCUCAUGUAAGACAACCUCACCAAAUACAAGAAAACAGUGUCCAGGAUUUUAAAAUACCCAGUAAUACAACAUUAAAAACUCCUCUGGUUGCCGUAUUUGAUGAUCUGGAUAUAGAAGCGGAUGAAGAAGAUGAACUUAGGGCCAGAGGUCUUACAGGUUUGAAAAAUAUUGGAAAUACUUGUUACAUGAAUGCAGCUUUGCAGGCUCUUUCUAAUUGCCCACCUUUGACACAGUUUUUUCUUGAUUGUGGAGGACUAGCUCGAACAGAUAAGAAACCUGCCAUUUGUAAAAGUUAUCUCAAACUAAUGACAGAGCUGUGGCAUAAAAGCAGGCCAGGAUCUGUUGUGCCUACUACUCUGUUUCAAGGAAUUAAAACUGUAAAUCCAACAUUUCGGGGGUAUUCUCAGCAGGAUGCUCAAGAAUUCCUUCGAUGUUUAAUGGAUUUGCUUCAUGAAGAAUUGAAAGAGCAAGUCAUGGAAGUAGAAGAAGAUCCGCAAACCAUAACCACUGAGGAGACAAUGGAAGAAGACAAGAGCCAGUCGGAUGUAGAUUUUCAGUCUUGUGAAUCUUGUAGCAACAGUGAUAGAGCAGAAAAUGAAAAUGGCUCUAGAUGCUUUUCUGAAGAUAAUAAUGAAACAACAAUGUUAAUUCAGGAUGAUGAAAACAAUUCAGAAAUGUCAAAGGAUUGGCAAAAAGAGAAGAUGUGCAAUAAGAUUAAUAAAGUAAAUUCUGAAGGCGAAUUUGAUAAAGAUAGAG2000000006ACUCUAUAUCUGAAACAGUCGACUUAAACAACCAGGAAACUGUCAAAGUGCAAAUACACAGCAGAGCUUCAGAAUAUAUCACUGAUGUCCAUUCGAAUGACCUGUCUACACCACAGAUCCUUCCAUCAAAUGAAGGUGUUAAUCCACGUUUAUCGGCAAGCCCUCCUAAAUCAGGCAAUUUGUGGCCAGGAUUGGCACCACCACACAAAAAAGCUCAGUCUGCAUCUCCAAAGAGAAAAAAACAGCACAAGAAAUACAGAAGUGUUAUUUCAGACAUAUUUGAUGGAACAAUCAUUAGUUCAGUGCAGUGUCUGACUUGUGACAGGGUGUCUGUAACCCUCGAGACCUUUCAAGAUCUGUCCUUGCCAAUUCCUGGCAAGGAAGACCUUGCUAAGCUGCAUUCAUCAAGUCA2000000009UCCAACUUCUAUAGUCAAAGCAGGAUCAUGUGGCGAAGCAUAUGCUCCACAAGGGUGGAUAGCUUUUUUCAUGGAAUAUGUGAAGAGCUGGUUUUGGGGUCCAGUAGUAACCUUGCAAGAUUGUCUUGCUGCCUUCUUUGCCAGAGAUGAACUAAAAGGUGACAAUAUGUACAGUUGUGAAAAAUGCAAAAAGUUGAGAAAUGGAGUGAAGUUUUGUAAAGUACAAAACUUUCCUGAGAUUUUGUGCAUCCACCUUAAAAGAUUCAGACAUGAACUAAUGUUUUCCACCAAAAUCAGUACCCAUGUUUCAUUUCCGCUAGAAGGCUUGGAUCUUCAGCCAUUUCUUGCUAAGGAUAGUCCAGCUCAAAUUGUGACAUAUGAUCUUCUGUCAGUCAUUUGCCAUCAUGGAACUGCAAGUAGUGGACACUAUAUAGCCUACUGCCGAAACAAUCUAAAUAAUCUCUGGUAUGAAUUUGAUGAUCAGAGUGUCACUGAAGUUUCAGAAUCUACUGUACAAAAUGCAGAAGCUUACGUUCUUUUCUAUAGGAAGAGCAGCGAAGAGGCACAAAAAGAGAGGAGAAGGAUAUCAAAUUUAUUGAACAUAAUGGAACCAAGCCUCCUUCAGUUUUAUAUUUCUCGACAGUGGCUUAAUAAAUUUAAGACCUUUGCCGAACCUGGCCCUAUUUCAAAUAAUGACUUUCUUUGUAUUCAUGGAGGUGUUCC2000000009UCCAAGAAAAGCUGGUUAUAUUGAAGACCUGGUUUUGAUGCUGCCUCAGAACAUUUGGGAUAACCUAUAUAGCAGGUAUGGUGGAGGACCAGCUGUCAACCAUCUGUACAUUUGUCAUACUUGCCAAAUUGAGGCGGAGAAAAUUGAAAAAAGAAGAAAAACUGAAUUGGAAAUUUUUAUUCGGGUAAAAAAGUGAUGCUUUUCAAAUUGAUCUAGGAUAAAGAUGAAGACCUGACAAUUAUCAGAGUUAUAUGAUAUUAAUAAAAUGAUUAGAUGAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	1504	1916	2639
Modification Positions	m6A	Y	Y
Genomic Coordinates	1:77728366:-	1:77722110:-	1:77713274:-
Level of Experimental Evidence	3	3	3
Level of Experimental Reliability	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML	BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq dknfVe6BK8aP