General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000485275
Gene ID:	ENSG00000121931
Gene Name:	LRIF1
Sequence (UNICHARACTER ENCODING)	GGAGACUCACGCCGAUUCUCUCUCAGCGUAGGGCUGUGAGGGCGCAGUCCACCGCCAGGAGCCUUCCGGUUUCUGCGCGGUGCGCGACCUCGUCCCGAAGCCUGGGGAUACACCCUCUCGAGAGCCCGCUGUCGCCCUCCGUUAAGGUCGAACCCCUCACAGUUGCUGUGGGCAACUCCAGCCCAACAUUCCCUCGCUCUGGUUCUCGCCCCAUUGGGAAACUCGGCCCCACGCUUCCCACUUUUCUGGAUGAGGUGUCCCCUUUCUCCCCACUAAAAUGUCAAAUAACCUACGGAGGGUCUUCCUGAAACCCGCAGAGGAAAAUUCAGGCAACGCCUCGCGUUGAUCCAUAAUGAGAUGGCAUCAACAUCAGAUAAAGGUGCCCAAGGAAGAAAUGACAAGAAAGAUUCUCAAGGAAGAAGUAAUAAGGCAUUACAUCUGAAGAGUGAUGCUGAAUUUAAAAAGAUAUUUGGCCUUACUAAGGAUUUGAGAGUGUGCCUUACUCGAAUUCCUGACCAUUUGACCUCUGGAGAAGGUUUCGAUUCCUPUAGCAGUUUGGUAAAGAGUGGUACUUACAAAGAGACAGAGUUUAUGGUGAAGGAAGGAGAGAGAAAACAGCAGAAUUUUGAUAAGAAAAGAAAAGCAAAAACUAAUAAGAAGAUGGAUCACAUAAAGAAGAGAAAAACAGAGAAUGCUUAUAACGCAAUCAUAAAUGGGGAAGCUAAUGUCACCGGUUCCCAACUCCUAAGCAGUAUUUUACCAACUUCAGAUGUGUCACAACAUAACAUUCUCACGAGUCACAGCAAAACCAGACAAGAAAAGAGAЖCUGAGAUGGAAUACUAUACCCAUGAGAAGCAAGAGAAAGGCACUUUGAAUUCAAAUGCAGCUUAUGAЖCAAAGUCAUUUCUUCAAUAAAAAUUAUACCGAAGAUAUUUUCCCAGUGACACCACCGGAGUUAGAAGAAACCAUUCGAGAUGAAAAAAUAAGAAGACUUAAGCAGGUGCUGAGAGAGAAAGAAGCAGCUCUUGAAGAAAUGCGUAAGAAGAUGCACCAAAAAUAAAAUCUCCUGUAAAGЖCUUCAGUGAAAUAGCUGUUUUUUAAAAUAUACUUCAGCAUUAAUAAGUUAAUUGUAGGUGUGUUCUGAAAGUGUCUUUGAAUAUGAAGCUUGUUUUUUCAUCAGUCGAUUGUACAACUPUAAGGAAUACAGAAAAGGUUGAUUCACAUAUGACUUGUGAAUAAUUUACAUGGGGUAUCUAUACCUUUGUCUUAGAUACCUUUUUUUGGAAGGAUAAAUUUUAUAUUUUUCUAUUAUUUUAACUAGAAUUCUCCAAGUUUGAAUAUUUGGGCAGGGUUUUUGUUAUUGUUUGUAUCUPUACCUAAAUUGCUCAGGCAUUAUUCCAGCAGUAGAUAGUGACUGUGUAUUACUGAAAUUUUACAAUUCAAGAGAGGAAAUCAGCUCCAAACUUAGCUUUUCCAGUGGAUUUGUAUAUGUACUUGCUPUAUCUCUPUACCCUUAAAAUGAUGAUACCUUGUAUUCACCAUUGUUUUUUUUAAUGUCGUGAAAUAAUAUGUAUUAUGGCAACAUUAUUUAAACAUUCAAACAUUUCUCAAGAAUGAGCAACAUUUGUAACUPUACAAUGUAAUUUUAUAUAAUCCAAAGGUAUUUUAGAAUUCAGGCCAUUUGAUGUUUUGUUUGCUUAUAGUGAUGUGUUCCCAGGCAAAUGCUGCUUUUUUUUUUUUUGGGACUAUGUACAUACGUUACUGAGAUUGUGUAAAAAGUAGAUCCUGAACAGUUAUC
Sequence (SHORT NAMES ENCODING)	GGAGACUCACGCCGAUUCUCUCUCAGCGUAGGGCUGUGAGGGCGCAGUCCACCGCCAGGAGCCUUCCGGUUUCUGCGCGGUGCGCGACCUCGUCCCGAAGCCUGGGGAUACACCCUCUCGAGAGCCCGCUGUCGCCCUCCGUUAAGGUCGAACCCCUCACAGUUGCUGUGGGCAACUCCAGCCCAACAUUCCCUCGCUCUGGUUCUCGCCCCAUUGGGAAACUCGGCCCCACGCUUCCCACUUUUCUGGAUGAGGUGUCCCCUUUCUCCCCACUAAAAUGUCAAAUAACCUACGGAGGGUCUUCCUGAAACCCGCAGAGGAAAAUUCAGGCAACGCCUCGCGUUGAUCCAUAAUGAGAUGGCAUCAACAUCAGAUAAAGGUGCCCAAGGAAGAAAUGACAAGAAAGAUUCUCAAGGAAGAAGUAAUAAGGCAUUACAUCUGAAGAGUGAUGCUGAAUUUAAAAAGAUAUUUGGCCUUACUAAGGAUUUGAGAGUGUGCCUUACUCGAAUUCCUGACCAUUUGACCUCUGGAGAAGGUUUCGAUUCCUYUAGCAGUUUGGUAAAGAGUGGUACUUACAAAGAGACAGAGUUUAUGGUGAAGGAAGGAGAGAGAAAACAGCAGAAUUUUGAUAAGAAAAGAAAAGCAAAAACUAAUAAGAAGAUGGAUCACAUAAAGAAGAGAAAAACAGAGAAUGCUUAUAACGCAAUCAUAAAUGGGGAAGCUAAUGUCACCGGUUCCCAACUCCUAAGCAGUAUUUUACCAACUUCAGAUGUGUCACAACAUAACAUUCUCACGAGUCACAGCAAAACCAGACAAGAAAAGAGAm6ACUGAGAUGGAAUACUAUACCCAUGAGAAGCAAGAGAAAGGCACUUUGAAUUCAAAUGCAGCUUAUGAm6ACAAAGUCAUUUCUUCAAUAAAAAUUAUACCGAAGAUAUUUUCCCAGUGACACCACCGGAGUUAGAAGAAACCAUUCGAGAUGAAAAAAUAAGAAGACUUAAGCAGGUGCUGAGAGAGAAAGAAGCAGCUCUUGAAGAAAUGCGUAAGAAGAUGCACCAAAAAUAAAAUCUCCUGUAAAGm6ACUUCAGUGAAAUAGCUGUUUUUUAAAAUAUACUUCAGCAUUAAUAAGUUAAUUGUAGGUGUGUUCUGAAAGUGUCUUUGAAUAUGAAGCUUGUUUUUUCAUCAGUCGAUUGUACAACUYUAAGGAAUACAGAAAAGGUUGAUUCACAUAUGACUUGUGAAUAAUUUACAUGGGGUAUCUAUACCUUUGUCUUAGAUACCUUUUUUUGGAAGGAUAAAUUUUAUAUUUUUCUAUUAUUUUAACUAGAAUUCUCCAAGUUUGAAUAUUUGGGCAGGGUUUUUGUUAUUGUUUGUAUCUYUACCUAAAUUGCUCAGGCAUUAUUCCAGCAGUAGAUAGUGACUGUGUAUUACUGAAAUUUUACAAUUCAAGAGAGGAAAUCAGCUCCAAACUUAGCUUUUCCAGUGGAUUUGUAUAUGUACUUGCUYUAUCUCUYUACCCUUAAAAUGAUGAUACCUUGUAUUCACCAUUGUUUUUUUUAAUGUCGUGAAAUAAUAUGUAUUAUGGCAACAUUAUUUAAACAUUCAAACAUUUCUCAAGAAUGAGCAACAUUUGUAACUYUACAAUGUAAUUUUAUAUAAUCCAAAGGUAUUUUAGAAUUCAGGCCAUUUGAUGUUUUGUUUGCUUAUAGUGAUGUGUUCCCAGGCAAAUGCUGCUUUUUUUUUUUUUGGGACUAUGUACAUACGUUACUGAGAUUGUGUAAAAAGUAGAUCCUGAACAGUUAUC
Sequence (MODOMICS CODE ENCODING)	GGAGACUCACGCCGAUUCUCUCUCAGCGUAGGGCUGUGAGGGCGCAGUCCACCGCCAGGAGCCUUCCGGUUUCUGCGCGGUGCGCGACCUCGUCCCGAAGCCUGGGGAUACACCCUCUCGAGAGCCCGCUGUCGCCCUCCGUUAAGGUCGAACCCCUCACAGUUGCUGUGGGCAACUCCAGCCCAACAUUCCCUCGCUCUGGUUCUCGCCCCAUUGGGAAACUCGGCCCCACGCUUCCCACUUUUCUGGAUGAGGUGUCCCCUUUCUCCCCACUAAAAUGUCAAAUAACCUACGGAGGGUCUUCCUGAAACCCGCAGAGGAAAAUUCAGGCAACGCCUCGCGUUGAUCCAUAAUGAGAUGGCAUCAACAUCAGAUAAAGGUGCCCAAGGAAGAAAUGACAAGAAAGAUUCUCAAGGAAGAAGUAAUAAGGCAUUACAUCUGAAGAGUGAUGCUGAAUUUAAAAAGAUAUUUGGCCUUACUAAGGAUUUGAGAGUGUGCCUUACUCGAAUUCCUGACCAUUUGACCUCUGGAGAAGGUUUCGAUUCCU2000000009UUAGCAGUUUGGUAAAGAGUGGUACUUACAAAGAGACAGAGUUUAUGGUGAAGGAAGGAGAGAGAAAACAGCAGAAUUUUGAUAAGAAAAGAAAAGCAAAAACUAAUAAGAAGAUGGAUCACAUAAAGAAGAGAAAAACAGAGAAUGCUUAUAACGCAAUCAUAAAUGGGGAAGCUAAUGUCACCGGUUCCCAACUCCUAAGCAGUAUUUUACCAACUUCAGAUGUGUCACAACAUAACAUUCUCACGAGUCACAGCAAAACCAGACAAGAAAAGAGA2000000006ACUGAGAUGGAAUACUAUACCCAUGAGAAGCAAGAGAAAGGCACUUUGAAUUCAAAUGCAGCUUAUGA2000000006ACAAAGUCAUUUCUUCAAUAAAAAUUAUACCGAAGAUAUUUUCCCAGUGACACCACCGGAGUUAGAAGAAACCAUUCGAGAUGAAAAAAUAAGAAGACUUAAGCAGGUGCUGAGAGAGAAAGAAGCAGCUCUUGAAGAAAUGCGUAAGAAGAUGCACCAAAAAUAAAAUCUCCUGUAAAG2000000006ACUUCAGUGAAAUAGCUGUUUUUUAAAAUAUACUUCAGCAUUAAUAAGUUAAUUGUAGGUGUGUUCUGAAAGUGUCUUUGAAUAUGAAGCUUGUUUUUUCAUCAGUCGAUUGUACAACU2000000009UUAAGGAAUACAGAAAAGGUUGAUUCACAUAUGACUUGUGAAUAAUUUACAUGGGGUAUCUAUACCUUUGUCUUAGAUACCUUUUUUUGGAAGGAUAAAUUUUAUAUUUUUCUAUUAUUUUAACUAGAAUUCUCCAAGUUUGAAUAUUUGGGCAGGGUUUUUGUUAUUGUUUGUAUCU2000000009UUACCUAAAUUGCUCAGGCAUUAUUCCAGCAGUAGAUAGUGACUGUGUAUUACUGAAAUUUUACAAUUCAAGAGAGGAAAUCAGCUCCAAACUUAGCUUUUCCAGUGGAUUUGUAUAUGUACUUGCU2000000009UUAUCUCU2000000009UUACCCUUAAAAUGAUGAUACCUUGUAUUCACCAUUGUUUUUUUUAAUGUCGUGAAAUAAUAUGUAUUAUGGCAACAUUAUUUAAACAUUCAAACAUUUCUCAAGAAUGAGCAACAUUUGUAACU2000000009UUACAAUGUAAUUUUAUAUAAUCCAAAGGUAUUUUAGAAUUCAGGCCAUUUGAUGUUUUGUUUGCUUAUAGUGAUGUGUUCCCAGGCAAAUGCUGCUUUUUUUUUUUUUGGGACUAUGUACAUACGUUACUGAGAUUGUGUAAAAAGUAGAUCCUGAACAGUUAUC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	548	826	894	1074	1193	1371	1498	1506	1631
Modification Positions	Y	m6A	m6A	m6A	Y	Y	Y	Y	Y
Genomic Coordinates	1:110949921:-	1:110948192:-	1:110948124:-	1:110947944:-	1:110947825:-	1:110947647:-	1:110947520:-	1:110947512:-	1:110947387:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	aJksAshEgQ8U D6ncpa2PPWj3 nfCHyrYzE6fB BtsJQJ3DteUq Yfn77uLS5tv8	Lny8GcCeVGc9 BtsJQJ3DteUq Yfn77uLS5tv8	D6ncpa2PPWj3 93arJtwJmuS9 BkoLW2CBToyL BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq iezFbUdmY3A6 JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8