General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000472013
Gene ID:	ENSG00000127125
Gene Name:	PPCS
Sequence (UNICHARACTER ENCODING)	GGCGCCGGCCGCUGCGCUGCAGAUGGCGGAAAUGGAUCCGGUAGCCGAGUUCCCCCAGCCUCCCGGUGCUGCGCGCUGGGCUGAGGUUAUGGCUCGCUUCGCGGCCAGGCUGGGCGCGCAGGGCCGGCGGGUGGUGUUGGUUACGUCAGGCGGCACCAAGGUCCCACUGGAAGCGCGGCCGGUGCGCUUCCUGGACAACUUCAGCAGCGGGCGGCGCGGUGCAACCUCGGCCGAGGCCUUCCUAGCCGCCGGCUACGGGGUCCUGUUCUUGUAUCGCGCUCGCUCUGCCUUCCCCUAUGCCCACCGCUUCCCACCCCAGACUUGGCUGUCCGCUCUGCGGCCUUCGGGCCCAGCCCUUUCGGGCUUGCUGAGCCUGGAGGCCGAGGAGAAUGCACUUCCGGGUUUUGCUGAGGCUCUGAGGAGCUACCAGGAGGCUGCGGCUGCAGGCACCUUCCUGGCAGUAGAGUUCACCACUUUGGCGGACUAUUUGCAUCUGUUGCAGGCUGCGGCCCAGGCACUCAAUCCGCUAGGUGCGUGCCCUAGGAGUACCCCUUUUGCCUGGAAGCACAGCCUUUCUUUCCAGCCACUUAUCCCCUUACCUCCUGCUUACCCACGGAUCUCAGCUGGGGAACCCGAGUUGAGAAGGAGCUGAUCCUAUAUCGUACCUCGCCGAUUUGUUAACACCUUGUGUUUCUCUUUGCAGGCCCUUCUGCGAUGUUUUACCUGGCUGCGGCUGUGUCAGAUUUCUAUGUUCCUGUCUCUGAAAUGCCUGAACACЖAGAUCCAGUCAUCUGGGGGCCCACUGCAGAUAACAAUGAAGAUGGUGCCAAAACUGCUUUCUCCUUUGGUUAAAGAUUGGGCUCCCAAAGCAUUUAUAAUUUCCUPUAAGUUGGAGЖCUGACCCCGCCAUUGUAAUUAAUCGAGCUCGGAAGGCUUUGGAAAUUUAUCAGCAUCAAGUGGUGGUGGCUAAUAUCCUUGAGUCACGACAGUCCUUUGUGUUUAUUGUAACCAAAGЖCUCGGAAACCAAGUUAUUGCUAUCAGAGGAAGAAAUAGAAAAAGGCGUAGAGAUAGAAGAGAAGAUAGUGGAUAAUCUUCAGUCUCGACACACAGCUUUUAUAGGUGACAGAAЖCUGAAGUAAAAAGCCCUUAUAGGAUCAAAAAUUGUUCAGGGCUCUUAGAGAUGGUGAAAЖCUACЖAAAAAAACCAUGGCUUUCAUAUGGЖCAGAUAAAAUGAAAGAAAGGGAAAAGGCAGUGGUGUGUAGGCAAAUAUGGUUUGGCAUUUGUCUUUUAAUGACACCUGAUAUGAUGUCAUUUUGAUUUUGAAAUUGAACACUAGAЖCUGUUAAUCACCUPUAAAAAGAAGAGCUUAUUGGGAAUUAUAUAUUCCUUAAAAUAUACAUGGGGGCCUGAAUGUCAGCCAUCUPUAUACUAUAGAAAAAGGAUUAUGGAUGCAUGAAUGGUCAUGCUUUGGAGAUCAAAUAUUGGUUGAAUGCCUAUGUAUGUCAGGCCCUGUGCUGAGCCAUGAGGAUUAAAAAGAUGAAUAAACAUAUCUUGUUUAGGAAAUGGAUGUAUAAAAAAAUCAAGUGCAAUAAAGUGUGUGUCCAAAAGCUGACACAAUGGAAA
Sequence (SHORT NAMES ENCODING)	GGCGCCGGCCGCUGCGCUGCAGAUGGCGGAAAUGGAUCCGGUAGCCGAGUUCCCCCAGCCUCCCGGUGCUGCGCGCUGGGCUGAGGUUAUGGCUCGCUUCGCGGCCAGGCUGGGCGCGCAGGGCCGGCGGGUGGUGUUGGUUACGUCAGGCGGCACCAAGGUCCCACUGGAAGCGCGGCCGGUGCGCUUCCUGGACAACUUCAGCAGCGGGCGGCGCGGUGCAACCUCGGCCGAGGCCUUCCUAGCCGCCGGCUACGGGGUCCUGUUCUUGUAUCGCGCUCGCUCUGCCUUCCCCUAUGCCCACCGCUUCCCACCCCAGACUUGGCUGUCCGCUCUGCGGCCUUCGGGCCCAGCCCUUUCGGGCUUGCUGAGCCUGGAGGCCGAGGAGAAUGCACUUCCGGGUUUUGCUGAGGCUCUGAGGAGCUACCAGGAGGCUGCGGCUGCAGGCACCUUCCUGGCAGUAGAGUUCACCACUUUGGCGGACUAUUUGCAUCUGUUGCAGGCUGCGGCCCAGGCACUCAAUCCGCUAGGUGCGUGCCCUAGGAGUACCCCUUUUGCCUGGAAGCACAGCCUUUCUUUCCAGCCACUUAUCCCCUUACCUCCUGCUUACCCACGGAUCUCAGCUGGGGAACCCGAGUUGAGAAGGAGCUGAUCCUAUAUCGUACCUCGCCGAUUUGUUAACACCUUGUGUUUCUCUUUGCAGGCCCUUCUGCGAUGUUUUACCUGGCUGCGGCUGUGUCAGAUUUCUAUGUUCCUGUCUCUGAAAUGCCUGAACACm6AAGAUCCAGUCAUCUGGGGGCCCACUGCAGAUAACAAUGAAGAUGGUGCCAAAACUGCUUUCUCCUUUGGUUAAAGAUUGGGCUCCCAAAGCAUUUAUAAUUUCCUYUAAGUUGGAGm6ACUGACCCCGCCAUUGUAAUUAAUCGAGCUCGGAAGGCUUUGGAAAUUUAUCAGCAUCAAGUGGUGGUGGCUAAUAUCCUUGAGUCACGACAGUCCUUUGUGUUUAUUGUAACCAAAGm6ACUCGGAAACCAAGUUAUUGCUAUCAGAGGAAGAAAUAGAAAAAGGCGUAGAGAUAGAAGAGAAGAUAGUGGAUAAUCUUCAGUCUCGACACACAGCUUUUAUAGGUGACAGAAm6ACUGAAGUAAAAAGCCCUUAUAGGAUCAAAAAUUGUUCAGGGCUCUUAGAGAUGGUGAAAm6ACUACm6AAAAAAAACCAUGGCUUUCAUAUGGm6ACAGAUAAAAUGAAAGAAAGGGAAAAGGCAGUGGUGUGUAGGCAAAUAUGGUUUGGCAUUUGUCUUUUAAUGACACCUGAUAUGAUGUCAUUUUGAUUUUGAAAUUGAACACUAGAm6ACUGUUAAUCACCUYUAAAAAGAAGAGCUUAUUGGGAAUUAUAUAUUCCUUAAAAUAUACAUGGGGGCCUGAAUGUCAGCCAUCUYUAUACUAUAGAAAAAGGAUUAUGGAUGCAUGAAUGGUCAUGCUUUGGAGAUCAAAUAUUGGUUGAAUGCCUAUGUAUGUCAGGCCCUGUGCUGAGCCAUGAGGAUUAAAAAGAUGAAUAAACAUAUCUUGUUUAGGAAAUGGAUGUAUAAAAAAAUCAAGUGCAAUAAAGUGUGUGUCCAAAAGCUGACACAAUGGAAA
Sequence (MODOMICS CODE ENCODING)	GGCGCCGGCCGCUGCGCUGCAGAUGGCGGAAAUGGAUCCGGUAGCCGAGUUCCCCCAGCCUCCCGGUGCUGCGCGCUGGGCUGAGGUUAUGGCUCGCUUCGCGGCCAGGCUGGGCGCGCAGGGCCGGCGGGUGGUGUUGGUUACGUCAGGCGGCACCAAGGUCCCACUGGAAGCGCGGCCGGUGCGCUUCCUGGACAACUUCAGCAGCGGGCGGCGCGGUGCAACCUCGGCCGAGGCCUUCCUAGCCGCCGGCUACGGGGUCCUGUUCUUGUAUCGCGCUCGCUCUGCCUUCCCCUAUGCCCACCGCUUCCCACCCCAGACUUGGCUGUCCGCUCUGCGGCCUUCGGGCCCAGCCCUUUCGGGCUUGCUGAGCCUGGAGGCCGAGGAGAAUGCACUUCCGGGUUUUGCUGAGGCUCUGAGGAGCUACCAGGAGGCUGCGGCUGCAGGCACCUUCCUGGCAGUAGAGUUCACCACUUUGGCGGACUAUUUGCAUCUGUUGCAGGCUGCGGCCCAGGCACUCAAUCCGCUAGGUGCGUGCCCUAGGAGUACCCCUUUUGCCUGGAAGCACAGCCUUUCUUUCCAGCCACUUAUCCCCUUACCUCCUGCUUACCCACGGAUCUCAGCUGGGGAACCCGAGUUGAGAAGGAGCUGAUCCUAUAUCGUACCUCGCCGAUUUGUUAACACCUUGUGUUUCUCUUUGCAGGCCCUUCUGCGAUGUUUUACCUGGCUGCGGCUGUGUCAGAUUUCUAUGUUCCUGUCUCUGAAAUGCCUGAACAC2000000006AAGAUCCAGUCAUCUGGGGGCCCACUGCAGAUAACAAUGAAGAUGGUGCCAAAACUGCUUUCUCCUUUGGUUAAAGAUUGGGCUCCCAAAGCAUUUAUAAUUUCCU2000000009UUAAGUUGGAG2000000006ACUGACCCCGCCAUUGUAAUUAAUCGAGCUCGGAAGGCUUUGGAAAUUUAUCAGCAUCAAGUGGUGGUGGCUAAUAUCCUUGAGUCACGACAGUCCUUUGUGUUUAUUGUAACCAAAG2000000006ACUCGGAAACCAAGUUAUUGCUAUCAGAGGAAGAAAUAGAAAAAGGCGUAGAGAUAGAAGAGAAGAUAGUGGAUAAUCUUCAGUCUCGACACACAGCUUUUAUAGGUGACAGAA2000000006ACUGAAGUAAAAAGCCCUUAUAGGAUCAAAAAUUGUUCAGGGCUCUUAGAGAUGGUGAAA2000000006ACUAC2000000006AAAAAAAACCAUGGCUUUCAUAUGG2000000006ACAGAUAAAAUGAAAGAAAGGGAAAAGGCAGUGGUGUGUAGGCAAAUAUGGUUUGGCAUUUGUCUUUUAAUGACACCUGAUAUGAUGUCAUUUUGAUUUUGAAAUUGAACACUAGA2000000006ACUGUUAAUCACCU2000000009UUAAAAAGAAGAGCUUAUUGGGAAUUAUAUAUUCCUUAAAAUAUACAUGGGGGCCUGAAUGUCAGCCAUCU2000000009UUAUACUAUAGAAAAAGGAUUAUGGAUGCAUGAAUGGUCAUGCUUUGGAGAUCAAAUAUUGGUUGAAUGCCUAUGUAUGUCAGGCCCUGUGCUGAGCCAUGAGGAUUAAAAAGAUGAAUAAACAUAUCUUGUUUAGGAAAUGGAUGUAUAAAAAAAUCAAGUGCAAUAAAGUGUGUGUCCAAAAGCUGACACAAUGGAAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	778	884	895	1013	1127	1187	1192	1217	1333	1347	1418
Modification Positions	m6A	Y	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	Y
Genomic Coordinates	1:42457321:+	1:42459679:+	1:42459690:+	1:42459808:+	1:42459922:+	1:42459982:+	1:42459987:+	1:42460012:+	1:42460128:+	1:42460142:+	1:42460213:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	834aFpha8RvT ksEP666umrV9 ZuM5xpZmNuDL	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 ArijeGVTwYBw BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa XUkp6ghERQML 834aFpha8RvT ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	834aFpha8RvT ksEP666umrV9 ZuM5xpZmNuDL	aJksAshEgQ8U D6ncpa2PPWj3 834aFpha8RvT ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8