General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000378344
Gene ID:	ENSG00000158109
Gene Name:	TPRG1L
Sequence (UNICHARACTER ENCODING)	GGCUGCGGCGACGGCGGUCGCGUCGGCGUCAGGGUCGGGGUCGGUAAGGGGUGCGGCAAUGCUGCAACUGCGGGACUCGGUGGACUCGGCCGGUACGAGCCCCACGGCGGUGCUGGCGGCCGGCGAGGAGGUGGGGGCAGGCGGCGGCCCGGGCGGGGGGCGGCCGGGGGCGGGGACGCCGCUGCGCCAGACACUCUGGCCUCUCAGCAUCCACGACCCCACGCGCCGCGCCCGCGUCAAGGAGUACUUCGUGUUCCGGCCCGGCAGCAUCGAGCAGGCAGUGGAGGAGAUCCGCGUGGUGGUGCGGCCCGUGGAGGACGGCGAGAUCCAGGGAGUGUGGCUGCUUACCGAGGUGGAUCACUGGAACAAUGAGAAGGAGCGGCUGGUGCUGGUCACGGAGCAGUCCCUGCUUAUCUGUAAAUACGACUUCAUCAGUCUCCAGUGCCAGCAGGUGGUGCGGAUAGCGCUCAACGCAGUAGACACCAUUUCCUACGGAGAAUUCCAGUUUCCCCCUAAAUCGCUCAACAAGCGAGAAGGUUUUGGGAUUCGAAUUCAGUGGGACAAGCAAAGUCGUCCUUCCUUCAUAAACAGAUGGAAUCCCUGGUCUACCAACGUGCCCUAUGCCACUUUCACAGAACACCCGAUGGCUGGCGCAGAUGAGAAGACAGCAUCUCUGUGUCAGUUGGAAAGCUUCAAGGCUCUGUUAAUCCAAGCUGUCAAAAAAGCCCAAAAAGAAAGCCCUUUGCCAGGACAGGCGAAUGGCGUGCUGAUCCUGGAGCGCCCCCUGCUCAUCGAGЖCCUACGUGGGACUCAUGUCCUUCAUUAACAACGAGGCGAAACUGGGCUACUCCAUGACCAGGGGCAAAAUAGGCUUUUAGCCGCUGCGUUCUGGGAGCUCCUCCCCCUUCUGGGAGCUCCUCCCCCUCCCCAGAAGGCCAAGGGAUGUGGGGGCUGGGGGACUGGGAGGCCUGGCAGUCUUCAUGCUGCCCUGCUGCUGCUGGAAGGAUGGGGAUCUUUCACCUUUAGGGAUCUCAGCACAAUUAGAAUCGUAAAGUGAAUUCUAUCUAUUUAAUUGGAUAUUGGЖCUCUGCUCAUAUAAGCUACAGACAAAAGCCAAAAGЖCUCUCGCUGUCCCUGUGCUGCUGGUAUUUCAUUCUCUGUAЖCUUCAGUUCUGGUGUUUUCCUUGAGUAUCUACUUGGCUUCUCGUGGUUUUUCCCACCCCAGCUGCCCCAGCACGCGGGACCCAUAGCACACCCCUUAGCGCUUGCCUAGGUUGCUGAAAACAGGGAGGCACCUGGUAUCUCGAGUGCCUGCAGUUGCAAGUAUGUUUACACCUGGUGUCCAAUUUUGUAUUUUAAAAUGUAAUCCAUUUUUACUUCAGCUCAUCCAAAAGCAGCCAGCAGACCGGUUGACUGAGACCGGUCUGUGGCUGUGGGCCCCUUGGUGACCCGCUGCUCUUUUGGAAAUGGGUGACCUGAAGUGACACUUUUUCCACAAUUAACCCAAGUUGUGUUAAUACUUCAGGUCUGUUUCCCAGACCCAGAAAGCUPUACAGAAAAUCAUUGUAAGACAAUUUAUUAAUUUGAGAAAGUCACCUUGACAGUUCUUUGCACACAAGUUUUACACCUCUCUGGAUUCGAAGUUUGUAUUGUAUUCAUAGUUAAAGGGAAUCGGGUACUUUGCUUGUUGAAUAAUGCACUPUAAAACAAGGAACCGUAUCAGGCCAGCAUGGUGGCUCAUGCCUGUAAUCCCAGCAUUUUGGGAGGCUCAGGCAGACAAAUCGCUCUAGCUCAGAAGUUGCAGAGCAGCCUGGGCAACAUGGUGAAACCCGUCUCUACCAAACAGACAAAAAGCAGCCAGGCGUGGUGGCACAUCUGUGGUCCCAGCUACUUGAGAGGCUGAGCCAGGAGGAUCGCUUGAGCCCAGGAGGCGGAGGUUGCAGUGAGCUGAGAUGGCACCACUUAUUGCACUCCAGCCCGGGCGACAGAGCGAGACUCCAUCUACCAGAUCCUUAUGACGCAGCUGAUGCCUGCCUUGGUUCCUACCACUCUGGUGUAGACAGAGGЖCUUUGUCCAAGUCUCACACUAAЖCAUGCCCGGGCUUCGAUGUGCCUGGAGGAUUUCCCCACAGGGACCCACGCACCUCCCUGUAUCUGCGCAGCUUGCUCGUGUGGCUGGAAGCGCUGUCGAUAAGCUUCACGCACUGGCUUGCCAGUUCUUCAGCUCUAGGЖCUUGUAGCUPUAAGCAAACGGUGUGGCAUGGGUUGAGUGUGGCCACCUGCAGGAUGUGCAGGGCUGCCUCAGAAGCUGGCUGGGGACUCUAGCCUCUGUGUUCAUAAAGACAUUAAGAAGUGGAUGGAUGUUGUUCCUUUUUUGAAGUUGUCAUUAAAGUAGGUGCAACAACCAA
Sequence (SHORT NAMES ENCODING)	GGCUGCGGCGACGGCGGUCGCGUCGGCGUCAGGGUCGGGGUCGGUAAGGGGUGCGGCAAUGCUGCAACUGCGGGACUCGGUGGACUCGGCCGGUACGAGCCCCACGGCGGUGCUGGCGGCCGGCGAGGAGGUGGGGGCAGGCGGCGGCCCGGGCGGGGGGCGGCCGGGGGCGGGGACGCCGCUGCGCCAGACACUCUGGCCUCUCAGCAUCCACGACCCCACGCGCCGCGCCCGCGUCAAGGAGUACUUCGUGUUCCGGCCCGGCAGCAUCGAGCAGGCAGUGGAGGAGAUCCGCGUGGUGGUGCGGCCCGUGGAGGACGGCGAGAUCCAGGGAGUGUGGCUGCUUACCGAGGUGGAUCACUGGAACAAUGAGAAGGAGCGGCUGGUGCUGGUCACGGAGCAGUCCCUGCUUAUCUGUAAAUACGACUUCAUCAGUCUCCAGUGCCAGCAGGUGGUGCGGAUAGCGCUCAACGCAGUAGACACCAUUUCCUACGGAGAAUUCCAGUUUCCCCCUAAAUCGCUCAACAAGCGAGAAGGUUUUGGGAUUCGAAUUCAGUGGGACAAGCAAAGUCGUCCUUCCUUCAUAAACAGAUGGAAUCCCUGGUCUACCAACGUGCCCUAUGCCACUUUCACAGAACACCCGAUGGCUGGCGCAGAUGAGAAGACAGCAUCUCUGUGUCAGUUGGAAAGCUUCAAGGCUCUGUUAAUCCAAGCUGUCAAAAAAGCCCAAAAAGAAAGCCCUUUGCCAGGACAGGCGAAUGGCGUGCUGAUCCUGGAGCGCCCCCUGCUCAUCGAGm6ACCUACGUGGGACUCAUGUCCUUCAUUAACAACGAGGCGAAACUGGGCUACUCCAUGACCAGGGGCAAAAUAGGCUUUUAGCCGCUGCGUUCUGGGAGCUCCUCCCCCUUCUGGGAGCUCCUCCCCCUCCCCAGAAGGCCAAGGGAUGUGGGGGCUGGGGGACUGGGAGGCCUGGCAGUCUUCAUGCUGCCCUGCUGCUGCUGGAAGGAUGGGGAUCUUUCACCUUUAGGGAUCUCAGCACAAUUAGAAUCGUAAAGUGAAUUCUAUCUAUUUAAUUGGAUAUUGGm6ACUCUGCUCAUAUAAGCUACAGACAAAAGCCAAAAGm6ACUCUCGCUGUCCCUGUGCUGCUGGUAUUUCAUUCUCUGUAm6ACUUCAGUUCUGGUGUUUUCCUUGAGUAUCUACUUGGCUUCUCGUGGUUUUUCCCACCCCAGCUGCCCCAGCACGCGGGACCCAUAGCACACCCCUUAGCGCUUGCCUAGGUUGCUGAAAACAGGGAGGCACCUGGUAUCUCGAGUGCCUGCAGUUGCAAGUAUGUUUACACCUGGUGUCCAAUUUUGUAUUUUAAAAUGUAAUCCAUUUUUACUUCAGCUCAUCCAAAAGCAGCCAGCAGACCGGUUGACUGAGACCGGUCUGUGGCUGUGGGCCCCUUGGUGACCCGCUGCUCUUUUGGAAAUGGGUGACCUGAAGUGACACUUUUUCCACAAUUAACCCAAGUUGUGUUAAUACUUCAGGUCUGUUUCCCAGACCCAGAAAGCUYUACAGAAAAUCAUUGUAAGACAAUUUAUUAAUUUGAGAAAGUCACCUUGACAGUUCUUUGCACACAAGUUUUACACCUCUCUGGAUUCGAAGUUUGUAUUGUAUUCAUAGUUAAAGGGAAUCGGGUACUUUGCUUGUUGAAUAAUGCACUYUAAAACAAGGAACCGUAUCAGGCCAGCAUGGUGGCUCAUGCCUGUAAUCCCAGCAUUUUGGGAGGCUCAGGCAGACAAAUCGCUCUAGCUCAGAAGUUGCAGAGCAGCCUGGGCAACAUGGUGAAACCCGUCUCUACCAAACAGACAAAAAGCAGCCAGGCGUGGUGGCACAUCUGUGGUCCCAGCUACUUGAGAGGCUGAGCCAGGAGGAUCGCUUGAGCCCAGGAGGCGGAGGUUGCAGUGAGCUGAGAUGGCACCACUUAUUGCACUCCAGCCCGGGCGACAGAGCGAGACUCCAUCUACCAGAUCCUUAUGACGCAGCUGAUGCCUGCCUUGGUUCCUACCACUCUGGUGUAGACAGAGGm6ACUUUGUCCAAGUCUCACACUAAm6ACAUGCCCGGGCUUCGAUGUGCCUGGAGGAUUUCCCCACAGGGACCCACGCACCUCCCUGUAUCUGCGCAGCUUGCUCGUGUGGCUGGAAGCGCUGUCGAUAAGCUUCACGCACUGGCUUGCCAGUUCUUCAGCUCUAGGm6ACUUGUAGCUYUAAGCAAACGGUGUGGCAUGGGUUGAGUGUGGCCACCUGCAGGAUGUGCAGGGCUGCCUCAGAAGCUGGCUGGGGACUCUAGCCUCUGUGUUCAUAAAGACAUUAAGAAGUGGAUGGAUGUUGUUCCUUUUUUGAAGUUGUCAUUAAAGUAGGUGCAACAACCAA
Sequence (MODOMICS CODE ENCODING)	GGCUGCGGCGACGGCGGUCGCGUCGGCGUCAGGGUCGGGGUCGGUAAGGGGUGCGGCAAUGCUGCAACUGCGGGACUCGGUGGACUCGGCCGGUACGAGCCCCACGGCGGUGCUGGCGGCCGGCGAGGAGGUGGGGGCAGGCGGCGGCCCGGGCGGGGGGCGGCCGGGGGCGGGGACGCCGCUGCGCCAGACACUCUGGCCUCUCAGCAUCCACGACCCCACGCGCCGCGCCCGCGUCAAGGAGUACUUCGUGUUCCGGCCCGGCAGCAUCGAGCAGGCAGUGGAGGAGAUCCGCGUGGUGGUGCGGCCCGUGGAGGACGGCGAGAUCCAGGGAGUGUGGCUGCUUACCGAGGUGGAUCACUGGAACAAUGAGAAGGAGCGGCUGGUGCUGGUCACGGAGCAGUCCCUGCUUAUCUGUAAAUACGACUUCAUCAGUCUCCAGUGCCAGCAGGUGGUGCGGAUAGCGCUCAACGCAGUAGACACCAUUUCCUACGGAGAAUUCCAGUUUCCCCCUAAAUCGCUCAACAAGCGAGAAGGUUUUGGGAUUCGAAUUCAGUGGGACAAGCAAAGUCGUCCUUCCUUCAUAAACAGAUGGAAUCCCUGGUCUACCAACGUGCCCUAUGCCACUUUCACAGAACACCCGAUGGCUGGCGCAGAUGAGAAGACAGCAUCUCUGUGUCAGUUGGAAAGCUUCAAGGCUCUGUUAAUCCAAGCUGUCAAAAAAGCCCAAAAAGAAAGCCCUUUGCCAGGACAGGCGAAUGGCGUGCUGAUCCUGGAGCGCCCCCUGCUCAUCGAG2000000006ACCUACGUGGGACUCAUGUCCUUCAUUAACAACGAGGCGAAACUGGGCUACUCCAUGACCAGGGGCAAAAUAGGCUUUUAGCCGCUGCGUUCUGGGAGCUCCUCCCCCUUCUGGGAGCUCCUCCCCCUCCCCAGAAGGCCAAGGGAUGUGGGGGCUGGGGGACUGGGAGGCCUGGCAGUCUUCAUGCUGCCCUGCUGCUGCUGGAAGGAUGGGGAUCUUUCACCUUUAGGGAUCUCAGCACAAUUAGAAUCGUAAAGUGAAUUCUAUCUAUUUAAUUGGAUAUUGG2000000006ACUCUGCUCAUAUAAGCUACAGACAAAAGCCAAAAG2000000006ACUCUCGCUGUCCCUGUGCUGCUGGUAUUUCAUUCUCUGUA2000000006ACUUCAGUUCUGGUGUUUUCCUUGAGUAUCUACUUGGCUUCUCGUGGUUUUUCCCACCCCAGCUGCCCCAGCACGCGGGACCCAUAGCACACCCCUUAGCGCUUGCCUAGGUUGCUGAAAACAGGGAGGCACCUGGUAUCUCGAGUGCCUGCAGUUGCAAGUAUGUUUACACCUGGUGUCCAAUUUUGUAUUUUAAAAUGUAAUCCAUUUUUACUUCAGCUCAUCCAAAAGCAGCCAGCAGACCGGUUGACUGAGACCGGUCUGUGGCUGUGGGCCCCUUGGUGACCCGCUGCUCUUUUGGAAAUGGGUGACCUGAAGUGACACUUUUUCCACAAUUAACCCAAGUUGUGUUAAUACUUCAGGUCUGUUUCCCAGACCCAGAAAGCU2000000009UUACAGAAAAUCAUUGUAAGACAAUUUAUUAAUUUGAGAAAGUCACCUUGACAGUUCUUUGCACACAAGUUUUACACCUCUCUGGAUUCGAAGUUUGUAUUGUAUUCAUAGUUAAAGGGAAUCGGGUACUUUGCUUGUUGAAUAAUGCACU2000000009UUAAAACAAGGAACCGUAUCAGGCCAGCAUGGUGGCUCAUGCCUGUAAUCCCAGCAUUUUGGGAGGCUCAGGCAGACAAAUCGCUCUAGCUCAGAAGUUGCAGAGCAGCCUGGGCAACAUGGUGAAACCCGUCUCUACCAAACAGACAAAAAGCAGCCAGGCGUGGUGGCACAUCUGUGGUCCCAGCUACUUGAGAGGCUGAGCCAGGAGGAUCGCUUGAGCCCAGGAGGCGGAGGUUGCAGUGAGCUGAGAUGGCACCACUUAUUGCACUCCAGCCCGGGCGACAGAGCGAGACUCCAUCUACCAGAUCCUUAUGACGCAGCUGAUGCCUGCCUUGGUUCCUACCACUCUGGUGUAGACAGAGG2000000006ACUUUGUCCAAGUCUCACACUAA2000000006ACAUGCCCGGGCUUCGAUGUGCCUGGAGGAUUUCCCCACAGGGACCCACGCACCUCCCUGUAUCUGCGCAGCUUGCUCGUGUGGCUGGAAGCGCUGUCGAUAAGCUUCACGCACUGGCUUGCCAGUUCUUCAGCUCUAGG2000000006ACUUGUAGCU2000000009UUAAGCAAACGGUGUGGCAUGGGUUGAGUGUGGCCACCUGCAGGAUGUGCAGGGCUGCCUCAGAAGCUGGCUGGGGACUCUAGCCUCUGUGUUCAUAAAGACAUUAAGAAGUGGAUGGAUGUUGUUCCUUUUUUGAAGUUGUCAUUAAAGUAGGUGCAACAACCAA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	797	1083	1119	1160	1547	1698	2063	2086	2226	2236
Modification Positions	m6A	m6A	m6A	m6A	Y	Y	m6A	m6A	m6A	Y
Genomic Coordinates	1:3628523:+	1:3628809:+	1:3628845:+	1:3628886:+	1:3629273:+	1:3629424:+	1:3629789:+	1:3629812:+	1:3629952:+	1:3629962:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U nfCHyrYzE6fB KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 ArijeGVTwYBw BkoLW2CBToyL nfCHyrYzE6fB WiQcrNTGZHPT KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6UuHp6YApVKv aivdrAsbdKEU gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL nfCHyrYzE6fB WiQcrNTGZHPT BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq CxQaH6qDB9bC dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8