General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000522111
Gene ID:	ENSG00000253368
Gene Name:	TRNP1
Sequence (UNICHARACTER ENCODING)	GGGGUGGGGGCUGUGGCCGUGUCUAGCUGUUCGGGUGUGCUGUGGUCAPCCUCCCUGCGCACCUACAGCCGCAGЖCCGCCGGUGGGGGGCGGGGGAUGCCGGGCUGCCGCAUCAGCGCCUGCGGCCCGGGGGCCCAGGAGGGGACGGCAGAGCAGAGGUCGCCGCCGCCGCCCUGGGAUCCCAUGCCGUCCUCUCAGCCCCCGCCCCCAACUCCGACCUUGACUCCUACCCCGACCCCGGGUCAGUCCCCGCCGCUGCCGGACGCAGCUGGGGCUUCAGCAGGCGCGGCCGAGGACCAGGAGCUGCAGCGCUGGCGCCAGGGCGCUAGCGGGAUCGCGGGGCUCGCCGGCCCCGGAGGGGGCUCUGGCGCGGCUGCGGGGGCGGGGGGCCGCGCGCUGGAGCUGGCCGAAGCACGGCGGCGGCUGCUGGAGGUGGAGGGCCGCCGGCGCCUGGUGUCGGAGCUGGAGAGCCGCGUGCUGCAGCUGCACCGCGUUUUCUUGGCGGCCGAGCUGCGCCUGGCGCACCGCGCGGAGAGCCUGAGCCGCCUGAGCGGCGGCGUGGCGCAGGCCGAGCUCUACCUGGCGGCUCACGGGUCGCGCCUCAAGAAGGGCCCGCGCCGCGGCCGCCGCGGCCGACCCCCCGCGCUGCUGGCCUCGGCGCUGGGCCUGGGCGGCUGCGUGCCCUGGGGUGCCGGGCGACUGCGGCGCGGCCACGGCCCCGAGCCCGACUCGCCCUUCCGCCGCAGCCCGCCCCGCGGCCCCGCCUCCCCGCAGCGCUGACCUCCACGCCCGGACCCCUGGCCACCCCGACAAGCUUCGCCGAGGUGCCGACCGACCGACUGAUCGCGGACGCCGGCUGGAAGGACUACGGAUCCGCAGGAAGAGGCAGUUGGGGGCCAGGGGCCCAGUAGAGGAGGCUGAGCUCCUUCCAACUCCUCAGAACCUCCACUCUAUGGAUCUGGACCUCUGGAUUCGGCUUUCUCCCUGGGCACUGCCUUCAGGAAGACGUUGAGAAUUGACCUUACACAAUCCCAGCGCCCUCCUCACAGGAGCCUUUCACUPUACAGUGGCAAGGGGCUGGUUCUGGAGAЖCUGGCUGAUGCUCUGAAUUUCUUCAUAUACCCCACAUUUGЖCUUUGGCUUACACUGUACAAUUGGAGAUGUUGCUACAGGUCCCUGAGAUGCAAUCAGAUUAAGCGUAGCAAGCAUUGCCAAUGGGAAAGUCAAAAUAAUUUAUUUUUUUUCCCUUUCCCCCUACCCCAPCCCCAGCCAAGAAUUUCUUUUCAAGAUAUCGUCAUCAUUCUUAAACAACAUUCUUAACCCCCAGCUGGGGUCCCCAUUUUAAUAGAUGUCAUUGCUUCAAGUCUAACGGCGCCGGGAGGCCUGUUUGAGGGAAAACAUUAGUUUGAAAAAUCCCCGUUCCCUUCAPCCACUGCCCUUGUUCUCCACGUGGGAGUGUGCUUGUGGCCCCUCAGAAAGAUAGUCUGCUGGCUCCUAGGGGUUGGGGUGGGGGACACACCUUUUUCUCAGGAAGAGGUGAUGGCAAUGUAAAACAUCUAAGCAAAGUUUUAAAUGAAAAAAAGGAAACACAUUUAAЖCAPCCUGAUAAUGGAGGGAAGGGGGGCACAUUUACACAUAGCCCAGAACUUGUAGAAUUCUGCAUAGUGAAUGUAUAUUGAAUUAGUCUCCUGCCUUAUACAUUCAGGAGGAAUAAAUUUCCAUAAUGUAAGGCAAAUGCAUGGGGUUCUGAGGUUCACUUUGCAAGUGCCCUUGCUGCCUUUCCUCUGUGUCUAUUAUGGCUCUUUAAGUUGACGGUUCCUGGAGCAGCUUGUAUUUAGUUUCGUUUGGCAGUCUGGCCCUGUUGACUUUGAUUUGCAGACCAAUUCUCCCUUGACCUGACUCACAGCCGCCUGCUCUUACCCCCCUCCUCAGGAAGUCUUCCUCAUUAAAGGAUGUGAUGACGGA
Sequence (SHORT NAMES ENCODING)	GGGGUGGGGGCUGUGGCCGUGUCUAGCUGUUCGGGUGUGCUGUGGUCAYCCUCCCUGCGCACCUACAGCCGCAGm6ACCGCCGGUGGGGGGCGGGGGAUGCCGGGCUGCCGCAUCAGCGCCUGCGGCCCGGGGGCCCAGGAGGGGACGGCAGAGCAGAGGUCGCCGCCGCCGCCCUGGGAUCCCAUGCCGUCCUCUCAGCCCCCGCCCCCAACUCCGACCUUGACUCCUACCCCGACCCCGGGUCAGUCCCCGCCGCUGCCGGACGCAGCUGGGGCUUCAGCAGGCGCGGCCGAGGACCAGGAGCUGCAGCGCUGGCGCCAGGGCGCUAGCGGGAUCGCGGGGCUCGCCGGCCCCGGAGGGGGCUCUGGCGCGGCUGCGGGGGCGGGGGGCCGCGCGCUGGAGCUGGCCGAAGCACGGCGGCGGCUGCUGGAGGUGGAGGGCCGCCGGCGCCUGGUGUCGGAGCUGGAGAGCCGCGUGCUGCAGCUGCACCGCGUUUUCUUGGCGGCCGAGCUGCGCCUGGCGCACCGCGCGGAGAGCCUGAGCCGCCUGAGCGGCGGCGUGGCGCAGGCCGAGCUCUACCUGGCGGCUCACGGGUCGCGCCUCAAGAAGGGCCCGCGCCGCGGCCGCCGCGGCCGACCCCCCGCGCUGCUGGCCUCGGCGCUGGGCCUGGGCGGCUGCGUGCCCUGGGGUGCCGGGCGACUGCGGCGCGGCCACGGCCCCGAGCCCGACUCGCCCUUCCGCCGCAGCCCGCCCCGCGGCCCCGCCUCCCCGCAGCGCUGACCUCCACGCCCGGACCCCUGGCCACCCCGACAAGCUUCGCCGAGGUGCCGACCGACCGACUGAUCGCGGACGCCGGCUGGAAGGACUACGGAUCCGCAGGAAGAGGCAGUUGGGGGCCAGGGGCCCAGUAGAGGAGGCUGAGCUCCUUCCAACUCCUCAGAACCUCCACUCUAUGGAUCUGGACCUCUGGAUUCGGCUUUCUCCCUGGGCACUGCCUUCAGGAAGACGUUGAGAAUUGACCUUACACAAUCCCAGCGCCCUCCUCACAGGAGCCUUUCACUYUACAGUGGCAAGGGGCUGGUUCUGGAGAm6ACUGGCUGAUGCUCUGAAUUUCUUCAUAUACCCCACAUUUGm6ACUUUGGCUUACACUGUACAAUUGGAGAUGUUGCUACAGGUCCCUGAGAUGCAAUCAGAUUAAGCGUAGCAAGCAUUGCCAAUGGGAAAGUCAAAAUAAUUUAUUUUUUUUCCCUUUCCCCCUACCCCAYCCCCAGCCAAGAAUUUCUUUUCAAGAUAUCGUCAUCAUUCUUAAACAACAUUCUUAACCCCCAGCUGGGGUCCCCAUUUUAAUAGAUGUCAUUGCUUCAAGUCUAACGGCGCCGGGAGGCCUGUUUGAGGGAAAACAUUAGUUUGAAAAAUCCCCGUUCCCUUCAYCCACUGCCCUUGUUCUCCACGUGGGAGUGUGCUUGUGGCCCCUCAGAAAGAUAGUCUGCUGGCUCCUAGGGGUUGGGGUGGGGGACACACCUUUUUCUCAGGAAGAGGUGAUGGCAAUGUAAAACAUCUAAGCAAAGUUUUAAAUGAAAAAAAGGAAACACAUUUAAm6ACAYCCUGAUAAUGGAGGGAAGGGGGGCACAUUUACACAUAGCCCAGAACUUGUAGAAUUCUGCAUAGUGAAUGUAUAUUGAAUUAGUCUCCUGCCUUAUACAUUCAGGAGGAAUAAAUUUCCAUAAUGUAAGGCAAAUGCAUGGGGUUCUGAGGUUCACUUUGCAAGUGCCCUUGCUGCCUUUCCUCUGUGUCUAUUAUGGCUCUUUAAGUUGACGGUUCCUGGAGCAGCUUGUAUUUAGUUUCGUUUGGCAGUCUGGCCCUGUUGACUUUGAUUUGCAGACCAAUUCUCCCUUGACCUGACUCACAGCCGCCUGCUCUUACCCCCCUCCUCAGGAAGUCUUCCUCAUUAAAGGAUGUGAUGACGGA
Sequence (MODOMICS CODE ENCODING)	GGGGUGGGGGCUGUGGCCGUGUCUAGCUGUUCGGGUGUGCUGUGGUCA2000000009UCCUCCCUGCGCACCUACAGCCGCAG2000000006ACCGCCGGUGGGGGGCGGGGGAUGCCGGGCUGCCGCAUCAGCGCCUGCGGCCCGGGGGCCCAGGAGGGGACGGCAGAGCAGAGGUCGCCGCCGCCGCCCUGGGAUCCCAUGCCGUCCUCUCAGCCCCCGCCCCCAACUCCGACCUUGACUCCUACCCCGACCCCGGGUCAGUCCCCGCCGCUGCCGGACGCAGCUGGGGCUUCAGCAGGCGCGGCCGAGGACCAGGAGCUGCAGCGCUGGCGCCAGGGCGCUAGCGGGAUCGCGGGGCUCGCCGGCCCCGGAGGGGGCUCUGGCGCGGCUGCGGGGGCGGGGGGCCGCGCGCUGGAGCUGGCCGAAGCACGGCGGCGGCUGCUGGAGGUGGAGGGCCGCCGGCGCCUGGUGUCGGAGCUGGAGAGCCGCGUGCUGCAGCUGCACCGCGUUUUCUUGGCGGCCGAGCUGCGCCUGGCGCACCGCGCGGAGAGCCUGAGCCGCCUGAGCGGCGGCGUGGCGCAGGCCGAGCUCUACCUGGCGGCUCACGGGUCGCGCCUCAAGAAGGGCCCGCGCCGCGGCCGCCGCGGCCGACCCCCCGCGCUGCUGGCCUCGGCGCUGGGCCUGGGCGGCUGCGUGCCCUGGGGUGCCGGGCGACUGCGGCGCGGCCACGGCCCCGAGCCCGACUCGCCCUUCCGCCGCAGCCCGCCCCGCGGCCCCGCCUCCCCGCAGCGCUGACCUCCACGCCCGGACCCCUGGCCACCCCGACAAGCUUCGCCGAGGUGCCGACCGACCGACUGAUCGCGGACGCCGGCUGGAAGGACUACGGAUCCGCAGGAAGAGGCAGUUGGGGGCCAGGGGCCCAGUAGAGGAGGCUGAGCUCCUUCCAACUCCUCAGAACCUCCACUCUAUGGAUCUGGACCUCUGGAUUCGGCUUUCUCCCUGGGCACUGCCUUCAGGAAGACGUUGAGAAUUGACCUUACACAAUCCCAGCGCCCUCCUCACAGGAGCCUUUCACU2000000009UUACAGUGGCAAGGGGCUGGUUCUGGAGA2000000006ACUGGCUGAUGCUCUGAAUUUCUUCAUAUACCCCACAUUUG2000000006ACUUUGGCUUACACUGUACAAUUGGAGAUGUUGCUACAGGUCCCUGAGAUGCAAUCAGAUUAAGCGUAGCAAGCAUUGCCAAUGGGAAAGUCAAAAUAAUUUAUUUUUUUUCCCUUUCCCCCUACCCCA2000000009UCCCCAGCCAAGAAUUUCUUUUCAAGAUAUCGUCAUCAUUCUUAAACAACAUUCUUAACCCCCAGCUGGGGUCCCCAUUUUAAUAGAUGUCAUUGCUUCAAGUCUAACGGCGCCGGGAGGCCUGUUUGAGGGAAAACAUUAGUUUGAAAAAUCCCCGUUCCCUUCA2000000009UCCACUGCCCUUGUUCUCCACGUGGGAGUGUGCUUGUGGCCCCUCAGAAAGAUAGUCUGCUGGCUCCUAGGGGUUGGGGUGGGGGACACACCUUUUUCUCAGGAAGAGGUGAUGGCAAUGUAAAACAUCUAAGCAAAGUUUUAAAUGAAAAAAAGGAAACACAUUUAA2000000006ACA2000000009UCCUGAUAAUGGAGGGAAGGGGGGCACAUUUACACAUAGCCCAGAACUUGUAGAAUUCUGCAUAGUGAAUGUAUAUUGAAUUAGUCUCCUGCCUUAUACAUUCAGGAGGAAUAAAUUUCCAUAAUGUAAGGCAAAUGCAUGGGGUUCUGAGGUUCACUUUGCAAGUGCCCUUGCUGCCUUUCCUCUGUGUCUAUUAUGGCUCUUUAAGUUGACGGUUCCUGGAGCAGCUUGUAUUUAGUUUCGUUUGGCAGUCUGGCCCUGUUGACUUUGAUUUGCAGACCAAUUCUCCCUUGACCUGACUCACAGCCGCCUGCUCUUACCCCCCUCCUCAGGAAGUCUUCCUCAUUAAAGGAUGUGAUGACGGA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	49	75	1061	1090	1131	1260	1426	1594	1597
Modification Positions	Y	m6A	Y	m6A	m6A	Y	Y	m6A	Y
Genomic Coordinates	1:26993740:+	1:26993766:+	1:26999986:+	1:27000015:+	1:27000056:+	1:27000185:+	1:27000351:+	1:27000519:+	1:27000522:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 f6YSioLdAWpr	bXBqJigD9oV3 f6YSioLdAWpr	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	5Nnepx5V7yHo gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL nfCHyrYzE6fB UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8