General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000468318
Gene ID:	ENSG00000143771
Gene Name:	CNIH4
Sequence (UNICHARACTER ENCODING)	GGUUUGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGAUGGAGGCGGUGGUGUUCGUCUUCUCUCUCCUCGAUUGUUGCGCGCUCAUCUUCCUCUCGGUCUACUUCGUAUCCUUGCCUGAGGCAGGCGAACGCCUUGCCGGGGGACACGGCUGAGGGUGGGCCAGUUGGGCACCCGGGCAGUGGGUAAUUCCAGAAUUGAUUGGCCAUACCAUUGUCACUGUAUUACUGCUCAUGUCAUUGCACUGGUUCAUCUUCCUUCUCAACUUACCUGUUGCCACUUGGAAUAUAUAUCGAUACЖUUAUGGUGCCGAGUGGUAACAUGGGAGUGUUUGAUCCAACAGAAAUACACAAUCGAGGGCAGCUGAAGUCACACAUGAAAGAAGCCAUGAUCAAGCUUGGUUUCCACUUGCUCUGCUUCUUCAUGUAUCUPUAUAGUAUGAUCUUAGCUUUGAUAAAUGACUGAAGCUGGAGAAGCCGUGGUUGAAGUCAGCCUACACUACAGUGCACAGUUGAGGAGCCAGAGACUUCUUAAAUCAPCCUUAGAЖCCGUGACCAUAGCAGUAUAUAUUUUCCUCUUGGAACAAAAAACUAUUUUUGCUGUAUUUUUACCAUAUAAAGUAUUUAAAAAACAUGAAUUGAGUUUCUGUAGAUUUCUAGUUCUCAACUPUAGCCUGAACGCCAACACUUGAAGGUGUUUUUCAPCCUCUGUAUGUUGAAGGUGGUUAUUUGUAUGUAGGAACAGGЖCUGCCAUCCCAGCUUUGCAUGCCAAAGAAAUAAAGAACACACUPUAAAGGGCAAACUGAAGAGAUGAGCGAGCAAAGGUGCCCUUCAGGUCUACUGAAAAGUUAGAGUACAAAACAACACUGUUGAUCUGGACAAAAGAAGAAAAAUUACCCUUUUUGCUUGUGUUGUGACAACUUCAUUUAAUAUGGUUUAAAGAUUUAUGAGЖCUGUCAGCUAAAAGUCUUUUCACAAGAAUGUCAACAGAGAAUGGCAUCUCAAAAUAUAUAUAUUUCUUUGCACAAUUUGUGAAACCUUAUAAGCCAUUUUCCCCAGGUACAAUGUAGUUCCUGCUGAUAGAAAGGAAAUAUUUUGUCAAGAGCUUUCAUUUAAAAGCUACUACCUCCACAAUCACCCCCAAACCCAGAAAAUCCCCACUGGCUCUUGCCAGUCUGGUUUUCGUAUUGCAGUUAUUCCAAUUGUAUUUGAUCUCCCUGAUAACGUAUUUUCAUGGGUUUGGGUAGAAGAUGCUAAUCAGAUUAGAAGCAGGAAUAGUUAUUUGCUGUCUGUGAAAUUGAGCCUUUUGGUGCGCCACGUGGUGCCAGAUCAACACUUCUAUCCCUCUGCACUGACCACGUUGUGAACUGGGAGACCAAAUGCAAGCCAUUUCAUGGACAUAGCAAUAUACAACCAAACUCUGUUCCUUGGAGUUAUAUUGUAAЖCUCUUGCAGGUGGGAGAGCAGUUCACCPCCUUAGCUCUGUUUGCCAGCUCUUACAGGGUAAAAUAAACCUGGCAAUUUAUCCUCA
Sequence (SHORT NAMES ENCODING)	GGUUUGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGAUGGAGGCGGUGGUGUUCGUCUUCUCUCUCCUCGAUUGUUGCGCGCUCAUCUUCCUCUCGGUCUACUUCGUAUCCUUGCCUGAGGCAGGCGAACGCCUUGCCGGGGGACACGGCUGAGGGUGGGCCAGUUGGGCACCCGGGCAGUGGGUAAUUCCAGAAUUGAUUGGCCAUACCAUUGUCACUGUAUUACUGCUCAUGUCAUUGCACUGGUUCAUCUUCCUUCUCAACUUACCUGUUGCCACUUGGAAUAUAUAUCGAUACm6AUUAUGGUGCCGAGUGGUAACAUGGGAGUGUUUGAUCCAACAGAAAUACACAAUCGAGGGCAGCUGAAGUCACACAUGAAAGAAGCCAUGAUCAAGCUUGGUUUCCACUUGCUCUGCUUCUUCAUGUAUCUYUAUAGUAUGAUCUUAGCUUUGAUAAAUGACUGAAGCUGGAGAAGCCGUGGUUGAAGUCAGCCUACACUACAGUGCACAGUUGAGGAGCCAGAGACUUCUUAAAUCAYCCUUAGAm6ACCGUGACCAUAGCAGUAUAUAUUUUCCUCUUGGAACAAAAAACUAUUUUUGCUGUAUUUUUACCAUAUAAAGUAUUUAAAAAACAUGAAUUGAGUUUCUGUAGAUUUCUAGUUCUCAACUYUAGCCUGAACGCCAACACUUGAAGGUGUUUUUCAYCCUCUGUAUGUUGAAGGUGGUUAUUUGUAUGUAGGAACAGGm6ACUGCCAUCCCAGCUUUGCAUGCCAAAGAAAUAAAGAACACACUYUAAAGGGCAAACUGAAGAGAUGAGCGAGCAAAGGUGCCCUUCAGGUCUACUGAAAAGUUAGAGUACAAAACAACACUGUUGAUCUGGACAAAAGAAGAAAAAUUACCCUUUUUGCUUGUGUUGUGACAACUUCAUUUAAUAUGGUUUAAAGAUUUAUGAGm6ACUGUCAGCUAAAAGUCUUUUCACAAGAAUGUCAACAGAGAAUGGCAUCUCAAAAUAUAUAUAUUUCUUUGCACAAUUUGUGAAACCUUAUAAGCCAUUUUCCCCAGGUACAAUGUAGUUCCUGCUGAUAGAAAGGAAAUAUUUUGUCAAGAGCUUUCAUUUAAAAGCUACUACCUCCACAAUCACCCCCAAACCCAGAAAAUCCCCACUGGCUCUUGCCAGUCUGGUUUUCGUAUUGCAGUUAUUCCAAUUGUAUUUGAUCUCCCUGAUAACGUAUUUUCAUGGGUUUGGGUAGAAGAUGCUAAUCAGAUUAGAAGCAGGAAUAGUUAUUUGCUGUCUGUGAAAUUGAGCCUUUUGGUGCGCCACGUGGUGCCAGAUCAACACUUCUAUCCCUCUGCACUGACCACGUUGUGAACUGGGAGACCAAAUGCAAGCCAUUUCAUGGACAUAGCAAUAUACAACCAAACUCUGUUCCUUGGAGUUAUAUUGUAAm6ACUCUUGCAGGUGGGAGAGCAGUUCACCYCCUUAGCUCUGUUUGCCAGCUCUUACAGGGUAAAAUAAACCUGGCAAUUUAUCCUCA
Sequence (MODOMICS CODE ENCODING)	GGUUUGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGAUGGAGGCGGUGGUGUUCGUCUUCUCUCUCCUCGAUUGUUGCGCGCUCAUCUUCCUCUCGGUCUACUUCGUAUCCUUGCCUGAGGCAGGCGAACGCCUUGCCGGGGGACACGGCUGAGGGUGGGCCAGUUGGGCACCCGGGCAGUGGGUAAUUCCAGAAUUGAUUGGCCAUACCAUUGUCACUGUAUUACUGCUCAUGUCAUUGCACUGGUUCAUCUUCCUUCUCAACUUACCUGUUGCCACUUGGAAUAUAUAUCGAUAC2000000006AUUAUGGUGCCGAGUGGUAACAUGGGAGUGUUUGAUCCAACAGAAAUACACAAUCGAGGGCAGCUGAAGUCACACAUGAAAGAAGCCAUGAUCAAGCUUGGUUUCCACUUGCUCUGCUUCUUCAUGUAUCU2000000009UUAUAGUAUGAUCUUAGCUUUGAUAAAUGACUGAAGCUGGAGAAGCCGUGGUUGAAGUCAGCCUACACUACAGUGCACAGUUGAGGAGCCAGAGACUUCUUAAAUCA2000000009UCCUUAGA2000000006ACCGUGACCAUAGCAGUAUAUAUUUUCCUCUUGGAACAAAAAACUAUUUUUGCUGUAUUUUUACCAUAUAAAGUAUUUAAAAAACAUGAAUUGAGUUUCUGUAGAUUUCUAGUUCUCAACU2000000009UUAGCCUGAACGCCAACACUUGAAGGUGUUUUUCA2000000009UCCUCUGUAUGUUGAAGGUGGUUAUUUGUAUGUAGGAACAGG2000000006ACUGCCAUCCCAGCUUUGCAUGCCAAAGAAAUAAAGAACACACU2000000009UUAAAGGGCAAACUGAAGAGAUGAGCGAGCAAAGGUGCCCUUCAGGUCUACUGAAAAGUUAGAGUACAAAACAACACUGUUGAUCUGGACAAAAGAAGAAAAAUUACCCUUUUUGCUUGUGUUGUGACAACUUCAUUUAAUAUGGUUUAAAGAUUUAUGAG2000000006ACUGUCAGCUAAAAGUCUUUUCACAAGAAUGUCAACAGAGAAUGGCAUCUCAAAAUAUAUAUAUUUCUUUGCACAAUUUGUGAAACCUUAUAAGCCAUUUUCCCCAGGUACAAUGUAGUUCCUGCUGAUAGAAAGGAAAUAUUUUGUCAAGAGCUUUCAUUUAAAAGCUACUACCUCCACAAUCACCCCCAAACCCAGAAAAUCCCCACUGGCUCUUGCCAGUCUGGUUUUCGUAUUGCAGUUAUUCCAAUUGUAUUUGAUCUCCCUGAUAACGUAUUUUCAUGGGUUUGGGUAGAAGAUGCUAAUCAGAUUAGAAGCAGGAAUAGUUAUUUGCUGUCUGUGAAAUUGAGCCUUUUGGUGCGCCACGUGGUGCCAGAUCAACACUUCUAUCCCUCUGCACUGACCACGUUGUGAACUGGGAGACCAAAUGCAAGCCAUUUCAUGGACAUAGCAAUAUACAACCAAACUCUGUUCCUUGGAGUUAUAUUGUAA2000000006ACUCUUGCAGGUGGGAGAGCAGUUCACC2000000009UCCUUAGCUCUGUUUGCCAGCUCUUACAGGGUAAAAUAAACCUGGCAAUUUAUCCUCA

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	299	430	537	545	666	701	743	787	948	1440	1468
Modification Positions	m6A	Y	Y	m6A	Y	Y	m6A	Y	m6A	m6A	Y
Genomic Coordinates	1:224371287:+	1:224371418:+	1:224375896:+	1:224375904:+	1:224376025:+	1:224376060:+	1:224376102:+	1:224376146:+	1:224376307:+	1:224376799:+	1:224376827:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3kRDPWwiRCgi L6w2k2VEv4EY	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP eGNFqdoGxzRm f6YSioLdAWpr kx7BHU7ZycYE Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq oZ9Kp5NX8Hv5 iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq oZ9Kp5NX8Hv5 Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL Lny8GcCeVGc9 BtsJQJ3DteUq oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 Yfn77uLS5tv8	BtsJQJ3DteUq oZ9Kp5NX8Hv5 Yfn77uLS5tv8	Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq oZ9Kp5NX8Hv5 XWZVGdLC6gGJ Yfn77uLS5tv8	BtsJQJ3DteUq oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq oZ9Kp5NX8Hv5 XWZVGdLC6gGJ JkWoGWVwjNda Yfn77uLS5tv8