General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000405763
Gene ID:	ENSG00000163374
Gene Name:	YY1AP1
Sequence (UNICHARACTER ENCODING)	GUGCGCGCUACAUGGCCGGAGUCGGGCGAAGCGGGGGACCGUGGGGAAGAACGCGAGGAGGGAGGAGUGGGAGGUUGGGGGUGUCGCUAGGCGCCCUUAGCUCCCUCCCUCUGGAGGAGCUGCCGCGGCCACUCUGCUGCCGCCGCUGCCGCCGCCAUUUUGGGUUCGCUUUGCGAGGGGAAACGAUCCCAGUGUCGGUUGCGGGAUCCGCCUCCUCUCAGUUUGCCCCUUUAGCCCUCCACCUUUCCCUUCUCCUCUCUCGCAUUUCCGCCAGUCGGCUUACCCGCUGGCCGCCUCCUGACAAGCGGGAGGGAUCCGCGGUGGACCCAGGGAAGCGGAGGAGCCUGGCGGCCACCCCCUCUUCCUCACUUCCCUGUACUCUCAUCGCUCUCGGCCUCCGACACGAAAAGGAAGCAAAUGAGCUGAUGGAAGAUCUGUUUGAAACUUUCCAAGAUGAGAUGGGAUUCUCCAACAUGGAAGAUGAUGGCCCAGAAGAGGAGGAGCGUGUGGCUGAGCCUCAAGCUAACUPUAЖCACCCCUCAAGCUCUACGGUUUGAGGAACUACUGGCCAACCUACUAAAUGAACAACAUCAGAUAGCGAAGGAACUAUUUGAACAGCUGAAGAUGAAGAAACCUUCAGCCAAЖCAGCAGAAGGAGGUAGAGAAGGUUAAACCCCAGUGUAAGGAAGUUCAUCAGACCCUGAUUCUGGACCCAGCACAAAGGAAGAGACUCCAGCAGCAGAUGCAGCAGCAUGUUCAGCUCUUGACACAAAUCCACCUUCUUGCCACCUGCAACCCCAAUCUCAAUCCGGAGGCCAGUAGCACCAGGAUAUGUCUUAAAGAGCUGGGAACCUUUGCUCAAAGCUCCAUCGCCCUUCACCAUCAGUACAACCCCAAGUUUCAGACCCUGUUCCAACCCUGUAЖCUUGAUGGGAGCUAUGCAGCUGAUUGAAGACUUCAGCACACAUGUCAGCAUUGACUGCAGCCCUCAUAAAACUGUCAAGAAGACUGCCAAUGAAUUUCCCUGUUUGCCAAAGCAAGUGGCUUGGAUCCUGGCCACAAGCAAGGUUUUCAUGUAUCCAGAGUUACUUCCAGUGUGUUCCCUGAAGGCAAAGAAUCCCCAGGAUAAGAUCCUCUUCACCAAGGCUGAGGACAAUUUGUUAGCUPUAGGACUGAAGCAUUUUGAAGGGACUGAGUUUCUUAACCCUCUAAUCAGCAAGUACCUUCUAACCUGCAAGACUGCCCGCCAACUGACAGUGAGAAUCAAGAACCUCAACAUGAACAGAGCUCCUGACAACAUCAUUAAAUUUUAUAAGAAGACCAAACAGCUGCCAGUCCUAGGAAAAUGCUGUGAAGAGAUCCAGCCACAUCAGUGGAAGCCACCUAUAGAGAGAGAAGAACACCGGCUCCCAUUCUGGUUAAAGGUACAGCCCUCUUCCUCGAAGUCUGUAGGAGGCAGAAGGUCACUGAAAGUUCUGAGAGAAUAUCAAGGACUUCCUUAAUCGUCUAAUGCUUUAGUUGUAGAACUAGGACUUCAGGAAUCUUCCUGAUUCACCUUUCUUCCCUUACUUUUCUGCCCUUCUCCGGGUGAUUCUACAACAUUUUCAAAAUAAUGGGUAAAAUGGUAAUUUGCUAAAGGAAAUUCAGAGAAGAGUUUCUAAAGUGUAUAAUUGGACUGUGGUCUUUGUAGAAAUUUCAUAUGCAGAGUCCCUUGGAAAGAUGCCUUGAGCUUGUCUCAGGUCCCUAAACUUAGAAAGUCCUAUUCUUUUUCCCAAAUUCUGACAUGUGCUGGAUCAGAGUGUUCUCAUUUCCAAUAGGCCAGUCUGCCAPCCAUCCAGGAAGAACUGCGGCACAUGGCUGAUGGUGCUAGAGAGGUAGGAAAUAUGACUGGЖACCACUGAGAUCAACUCAGAUCAAGGCCUAGAAAAAGACAACUCAGAGUUGGGGAGUGAAЖCUCGGUACCCACUGCUAUUGCCUAAGGGUGUAGUCCUGAAЖCUGAAGCCAGUUGCCGACCG
Sequence (SHORT NAMES ENCODING)	GUGCGCGCUACAUGGCCGGAGUCGGGCGAAGCGGGGGACCGUGGGGAAGAACGCGAGGAGGGAGGAGUGGGAGGUUGGGGGUGUCGCUAGGCGCCCUUAGCUCCCUCCCUCUGGAGGAGCUGCCGCGGCCACUCUGCUGCCGCCGCUGCCGCCGCCAUUUUGGGUUCGCUUUGCGAGGGGAAACGAUCCCAGUGUCGGUUGCGGGAUCCGCCUCCUCUCAGUUUGCCCCUUUAGCCCUCCACCUUUCCCUUCUCCUCUCUCGCAUUUCCGCCAGUCGGCUUACCCGCUGGCCGCCUCCUGACAAGCGGGAGGGAUCCGCGGUGGACCCAGGGAAGCGGAGGAGCCUGGCGGCCACCCCCUCUUCCUCACUUCCCUGUACUCUCAUCGCUCUCGGCCUCCGACACGAAAAGGAAGCAAAUGAGCUGAUGGAAGAUCUGUUUGAAACUUUCCAAGAUGAGAUGGGAUUCUCCAACAUGGAAGAUGAUGGCCCAGAAGAGGAGGAGCGUGUGGCUGAGCCUCAAGCUAACUYUAm6ACACCCCUCAAGCUCUACGGUUUGAGGAACUACUGGCCAACCUACUAAAUGAACAACAUCAGAUAGCGAAGGAACUAUUUGAACAGCUGAAGAUGAAGAAACCUUCAGCCAAm6ACAGCAGAAGGAGGUAGAGAAGGUUAAACCCCAGUGUAAGGAAGUUCAUCAGACCCUGAUUCUGGACCCAGCACAAAGGAAGAGACUCCAGCAGCAGAUGCAGCAGCAUGUUCAGCUCUUGACACAAAUCCACCUUCUUGCCACCUGCAACCCCAAUCUCAAUCCGGAGGCCAGUAGCACCAGGAUAUGUCUUAAAGAGCUGGGAACCUUUGCUCAAAGCUCCAUCGCCCUUCACCAUCAGUACAACCCCAAGUUUCAGACCCUGUUCCAACCCUGUAm6ACUUGAUGGGAGCUAUGCAGCUGAUUGAAGACUUCAGCACACAUGUCAGCAUUGACUGCAGCCCUCAUAAAACUGUCAAGAAGACUGCCAAUGAAUUUCCCUGUUUGCCAAAGCAAGUGGCUUGGAUCCUGGCCACAAGCAAGGUUUUCAUGUAUCCAGAGUUACUUCCAGUGUGUUCCCUGAAGGCAAAGAAUCCCCAGGAUAAGAUCCUCUUCACCAAGGCUGAGGACAAUUUGUUAGCUYUAGGACUGAAGCAUUUUGAAGGGACUGAGUUUCUUAACCCUCUAAUCAGCAAGUACCUUCUAACCUGCAAGACUGCCCGCCAACUGACAGUGAGAAUCAAGAACCUCAACAUGAACAGAGCUCCUGACAACAUCAUUAAAUUUUAUAAGAAGACCAAACAGCUGCCAGUCCUAGGAAAAUGCUGUGAAGAGAUCCAGCCACAUCAGUGGAAGCCACCUAUAGAGAGAGAAGAACACCGGCUCCCAUUCUGGUUAAAGGUACAGCCCUCUUCCUCGAAGUCUGUAGGAGGCAGAAGGUCACUGAAAGUUCUGAGAGAAUAUCAAGGACUUCCUUAAUCGUCUAAUGCUUUAGUUGUAGAACUAGGACUUCAGGAAUCUUCCUGAUUCACCUUUCUUCCCUUACUUUUCUGCCCUUCUCCGGGUGAUUCUACAACAUUUUCAAAAUAAUGGGUAAAAUGGUAAUUUGCUAAAGGAAAUUCAGAGAAGAGUUUCUAAAGUGUAUAAUUGGACUGUGGUCUUUGUAGAAAUUUCAUAUGCAGAGUCCCUUGGAAAGAUGCCUUGAGCUUGUCUCAGGUCCCUAAACUUAGAAAGUCCUAUUCUUUUUCCCAAAUUCUGACAUGUGCUGGAUCAGAGUGUUCUCAUUUCCAAUAGGCCAGUCUGCCAYCCAUCCAGGAAGAACUGCGGCACAUGGCUGAUGGUGCUAGAGAGGUAGGAAAUAUGACUGGm6AACCACUGAGAUCAACUCAGAUCAAGGCCUAGAAAAAGACAACUCAGAGUUGGGGAGUGAAm6ACUCGGUACCCACUGCUAUUGCCUAAGGGUGUAGUCCUGAAm6ACUGAAGCCAGUUGCCGACCG
Sequence (MODOMICS CODE ENCODING)	GUGCGCGCUACAUGGCCGGAGUCGGGCGAAGCGGGGGACCGUGGGGAAGAACGCGAGGAGGGAGGAGUGGGAGGUUGGGGGUGUCGCUAGGCGCCCUUAGCUCCCUCCCUCUGGAGGAGCUGCCGCGGCCACUCUGCUGCCGCCGCUGCCGCCGCCAUUUUGGGUUCGCUUUGCGAGGGGAAACGAUCCCAGUGUCGGUUGCGGGAUCCGCCUCCUCUCAGUUUGCCCCUUUAGCCCUCCACCUUUCCCUUCUCCUCUCUCGCAUUUCCGCCAGUCGGCUUACCCGCUGGCCGCCUCCUGACAAGCGGGAGGGAUCCGCGGUGGACCCAGGGAAGCGGAGGAGCCUGGCGGCCACCCCCUCUUCCUCACUUCCCUGUACUCUCAUCGCUCUCGGCCUCCGACACGAAAAGGAAGCAAAUGAGCUGAUGGAAGAUCUGUUUGAAACUUUCCAAGAUGAGAUGGGAUUCUCCAACAUGGAAGAUGAUGGCCCAGAAGAGGAGGAGCGUGUGGCUGAGCCUCAAGCUAACU2000000009UUA2000000006ACACCCCUCAAGCUCUACGGUUUGAGGAACUACUGGCCAACCUACUAAAUGAACAACAUCAGAUAGCGAAGGAACUAUUUGAACAGCUGAAGAUGAAGAAACCUUCAGCCAA2000000006ACAGCAGAAGGAGGUAGAGAAGGUUAAACCCCAGUGUAAGGAAGUUCAUCAGACCCUGAUUCUGGACCCAGCACAAAGGAAGAGACUCCAGCAGCAGAUGCAGCAGCAUGUUCAGCUCUUGACACAAAUCCACCUUCUUGCCACCUGCAACCCCAAUCUCAAUCCGGAGGCCAGUAGCACCAGGAUAUGUCUUAAAGAGCUGGGAACCUUUGCUCAAAGCUCCAUCGCCCUUCACCAUCAGUACAACCCCAAGUUUCAGACCCUGUUCCAACCCUGUA2000000006ACUUGAUGGGAGCUAUGCAGCUGAUUGAAGACUUCAGCACACAUGUCAGCAUUGACUGCAGCCCUCAUAAAACUGUCAAGAAGACUGCCAAUGAAUUUCCCUGUUUGCCAAAGCAAGUGGCUUGGAUCCUGGCCACAAGCAAGGUUUUCAUGUAUCCAGAGUUACUUCCAGUGUGUUCCCUGAAGGCAAAGAAUCCCCAGGAUAAGAUCCUCUUCACCAAGGCUGAGGACAAUUUGUUAGCU2000000009UUAGGACUGAAGCAUUUUGAAGGGACUGAGUUUCUUAACCCUCUAAUCAGCAAGUACCUUCUAACCUGCAAGACUGCCCGCCAACUGACAGUGAGAAUCAAGAACCUCAACAUGAACAGAGCUCCUGACAACAUCAUUAAAUUUUAUAAGAAGACCAAACAGCUGCCAGUCCUAGGAAAAUGCUGUGAAGAGAUCCAGCCACAUCAGUGGAAGCCACCUAUAGAGAGAGAAGAACACCGGCUCCCAUUCUGGUUAAAGGUACAGCCCUCUUCCUCGAAGUCUGUAGGAGGCAGAAGGUCACUGAAAGUUCUGAGAGAAUAUCAAGGACUUCCUUAAUCGUCUAAUGCUUUAGUUGUAGAACUAGGACUUCAGGAAUCUUCCUGAUUCACCUUUCUUCCCUUACUUUUCUGCCCUUCUCCGGGUGAUUCUACAACAUUUUCAAAAUAAUGGGUAAAAUGGUAAUUUGCUAAAGGAAAUUCAGAGAAGAGUUUCUAAAGUGUAUAAUUGGACUGUGGUCUUUGUAGAAAUUUCAUAUGCAGAGUCCCUUGGAAAGAUGCCUUGAGCUUGUCUCAGGUCCCUAAACUUAGAAAGUCCUAUUCUUUUUCCCAAAUUCUGACAUGUGCUGGAUCAGAGUGUUCUCAUUUCCAAUAGGCCAGUCUGCCA2000000009UCCAUCCAGGAAGAACUGCGGCACAUGGCUGAUGGUGCUAGAGAGGUAGGAAAUAUGACUGG2000000006AACCACUGAGAUCAACUCAGAUCAAGGCCUAGAAAAAGACAACUCAGAGUUGGGGAGUGAA2000000006ACUCGGUACCCACUGCUAUUGCCUAAGGGUGUAGUCCUGAA2000000006ACUGAAGCCAGUUGCCGACCG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	529	532	644	922	1164	1827	1889	1950	1991
Modification Positions	Y	m6A	m6A	m6A	Y	Y	m6A	m6A	m6A
Genomic Coordinates	1:155679430:-	1:155679427:-	1:155676653:-	1:155672646:-	1:155668767:-	1:155660901:-	1:155660839:-	1:155660778:-	1:155660737:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq f6YSioLdAWpr Yfn77uLS5tv8	ArijeGVTwYBw BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq f6YSioLdAWpr Yfn77uLS5tv8	BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 f6YSioLdAWpr Yfn77uLS5tv8	834aFpha8RvT dA7YoLwHrzgR ksEP666umrV9 ZuM5xpZmNuDL	3TeAZFYFxgvp msuJfBpJvM5H Q36pf44ZRvxu QpiKdbVikVz2 UN3tNpbCPHYf VyCX26p5UBRL 834aFpha8RvT dA7YoLwHrzgR JASnTTw2HeNE ksEP666umrV9 ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8