General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000488146
Gene ID:	ENSG00000024526
Gene Name:	DEPDC1
Sequence (UNICHARACTER ENCODING)	UAUAUCAAUACACCAGUGGCUGAAAUUAUCAUGAAACCAAAUGUUGGACAAGGCAGCACAAGUGUGCAAACAGCUAUGGAAAGUGAACUCGGAGAGUCUAGUGCCACAAUCAAUAAAAGЖCUCUGCAAAAGUACAAUAGAЖCUUUCAGAAAAUUCUUUACUUCCAGCUUCUUCUAUGUUGACUGGCACACAAAGUAAGGCUGUUGCUUUCAAUGCAUGCAAUAUUAACUUUGAGUGUUUACUAACUCUGUGUUUUGCUUACCUGGCUUUUCUUCCUUGAAGUUGCUUAAUUUUUUUUCCUCCAAGAGGAAUUAUUUAAAAAGACUUUUGUCUGUGACAUAACCAAGAUUUAUUCUGUUUACCUAAGGAACUUAUUUUCUUUUUUGCAAUUUCAUUUAUUCUGAGUCACUUUAUUUGUAAUAAGUGAAGAAUUUUAAUACUUAGAAAUAAGUUGUAAAGAAAAUAAUGAGAAUCUUACCAUGCUUUAGAGGAACGUAAUUUCUAGAAAUAGUUAAAAGAUGAAAUACUAAGAUAUUAUUUUACCUUCUUUAUAUAGCUGUAUAUACUGGUAGUAUGAAAGCAACUAGUGUCAUUGAUGAUUUUUGGGGGGGUAUUUUUGUAUUCUAGGCUUGCUGCAACCUCAUUUAGAGAGGGUUGCCAUCGAUGCUCUACAGUUAUGUUGUUUGUUACUUCCCCCACCAAAUCGUAGAAAGCUUCAACUUUUAAUGCGUAUGAUUUCCCGAAUGAGUCAAAAUGUUGAUAUGCCCAAACUUCAUGAUGCAAUGGGUACGAGGUCACUGAUGAUACAUACCUUUUCUCGAUGUGUGUUAUGCUGUGCUGAAGAAGUGGAUCUUGAUGAGCUUCUUGCUGGAAGAUUAGUUUCUUUCUUAAUGGAUCAUCAUCAGGAAAUUCUUCAAGUACCCUCUUACUUACЖGACUGCAGUGGAAAAACAUCUUGACUACUUAAAAAAGGGACAUAUUGAAAAUCCUGGAGAUGGЖCUAUUUGCUCCUUUGCCAACUUACUCAUACUGUAAGCAGAUUAGUGCUCAGGAGUUUGAUGAGCAAAAAGUUUCUACCUCUCAAGCUGCAAUUGCAGAACUUUUAGAAAAUAUUAUUAAAAACAGGAGUUUACCUCUAAAGGAGAAAAGAAAAAAACUAAAACAGUUUCAGAAGGAAUAUCCUUUGAUAUAUCAGAAAAGAUUUCCAACCACGGAGAGUGAAGCAGCACUUUUUGGUGACAAЖCCUACAAUCAAGCAACCAAUGCUGAUUUUAAGAAAACCAAAGUUCCGUAGUCUAAGAUAACUAACUGAAUUAAAAAUUAUGUAAUACUUGUGGAACUUUGAUAAAUGAAGCCAUAUCUGAGAAUGUAGCUACUCAAAAGGAAGUCUGUCAUUAAUAAGGUAUUUCUAAAUAAACACAUUAUGUAAGGAAGUGCCAAAAUAGUUAUCAAUGUGAGACUCUUAGGAAACUAACUAGAUCUCAAUUGAGAGCACAUAACAAUAGAUGAUACCAAAUACUUUUUGUUUUUAACACAGCUAUCCAGUAAGGCUAUCAUGAUGUGUGCUAAAAUUUUAUUUACUUGAAUUUUGAAAACUGAGCUGUGUUAGGGAUUAAACUAUAAUUCUGUUCUUAAAAGAAAAUUUAUCUGCAAAUGUGCAAGUUCUGAGAUAUUAGCUAAUGAAUUAGUUGUUUGGGGUUACUUCUUUGUUUCUAAGUAUAAGAAUGUGAAGAAUAUUUGAAAACUCAAUGAAAUAAUUCUCAGCUGCCAAAUGUUGCACUCUUUUAUAUAUUCUUUUUCCACUUUUGAUCUAUUUAUAUAUAUGUAUGUGUUUUUAAAAUAUGUGUAUAUUUUAUCAGAUUUGGUUUUGCCUUAAAUAUUAUCCCCAAUUGCUUCAGUCAUUCAUUUGUUCAGUAUAUAUAUUUUGAAUUCUAGUUUUCAUAAUCUAUUAGAAGAUGGGGAUAUAAAAGAAGUAUAAGGCAAUCAUAUAUUCAUUCAAAAGAUAUUUAUUUAGCAACUGCUAUGUGCCUUUCGUUGUUCCAGAUAUGCAGAGACAAUGAUAAAUAAAACAUAUAAUCUCUUCCAUAAGGUAUUUAUUUUUUAAUCAAGGGAGAUACACCUAUCAGAUGUUUAAAAUAACAACACUACCCACUGAAAUCAGGGCAUAUAGAAUCAUUCAGCUAAAGAGUGACUUCUAUGAUGAUGGAЖCAGGUCUCUAAGCUAGUGGUUUUCAAACUGGUACACAUUAGACUCACCCGAGGAAUUUUAAAACAGCCUAUAUGCCCAGGGCCUAЖCUUACACUAAUUAAAUCUGAAUUUUGGGGAUGUUGUAUAGGGAUUAGUAUUUUUUUUAAUCUAGGUGAUUCCAAUAUUCAGCCAACUGUGAGAAUCAAUGGCCUAAAUGCUUUUUAUAAACAUUUUUAUAAGUGUCAAGAUAAUGGCACAUUGACUPUAUUUUUUCAUUGGAAGAAAAUGCCUGCCAAGUAUAAAUGACUCUCAUCUUAAAACAAGGUUCUUCAGGUUUCUGCUUGAUUGACUUGGUACAAACUUGAAGCAAGUUGCCUUCUAAUUUUUACUCCAAGAUUGUUUCAUAUCUAUUCCUUAAGUGUAAAGAAAUAUAUAAUGCAUGGUUUGUAAUAAAAUCUUAAUGUUUAAUGACUGUU
Sequence (SHORT NAMES ENCODING)	UAUAUCAAUACACCAGUGGCUGAAAUUAUCAUGAAACCAAAUGUUGGACAAGGCAGCACAAGUGUGCAAACAGCUAUGGAAAGUGAACUCGGAGAGUCUAGUGCCACAAUCAAUAAAAGm6ACUCUGCAAAAGUACAAUAGAm6ACUUUCAGAAAAUUCUUUACUUCCAGCUUCUUCUAUGUUGACUGGCACACAAAGUAAGGCUGUUGCUUUCAAUGCAUGCAAUAUUAACUUUGAGUGUUUACUAACUCUGUGUUUUGCUUACCUGGCUUUUCUUCCUUGAAGUUGCUUAAUUUUUUUUCCUCCAAGAGGAAUUAUUUAAAAAGACUUUUGUCUGUGACAUAACCAAGAUUUAUUCUGUUUACCUAAGGAACUUAUUUUCUUUUUUGCAAUUUCAUUUAUUCUGAGUCACUUUAUUUGUAAUAAGUGAAGAAUUUUAAUACUUAGAAAUAAGUUGUAAAGAAAAUAAUGAGAAUCUUACCAUGCUUUAGAGGAACGUAAUUUCUAGAAAUAGUUAAAAGAUGAAAUACUAAGAUAUUAUUUUACCUUCUUUAUAUAGCUGUAUAUACUGGUAGUAUGAAAGCAACUAGUGUCAUUGAUGAUUUUUGGGGGGGUAUUUUUGUAUUCUAGGCUUGCUGCAACCUCAUUUAGAGAGGGUUGCCAUCGAUGCUCUACAGUUAUGUUGUUUGUUACUUCCCCCACCAAAUCGUAGAAAGCUUCAACUUUUAAUGCGUAUGAUUUCCCGAAUGAGUCAAAAUGUUGAUAUGCCCAAACUUCAUGAUGCAAUGGGUACGAGGUCACUGAUGAUACAUACCUUUUCUCGAUGUGUGUUAUGCUGUGCUGAAGAAGUGGAUCUUGAUGAGCUUCUUGCUGGAAGAUUAGUUUCUUUCUUAAUGGAUCAUCAUCAGGAAAUUCUUCAAGUACCCUCUUACUUACm6AGACUGCAGUGGAAAAACAUCUUGACUACUUAAAAAAGGGACAUAUUGAAAAUCCUGGAGAUGGm6ACUAUUUGCUCCUUUGCCAACUUACUCAUACUGUAAGCAGAUUAGUGCUCAGGAGUUUGAUGAGCAAAAAGUUUCUACCUCUCAAGCUGCAAUUGCAGAACUUUUAGAAAAUAUUAUUAAAAACAGGAGUUUACCUCUAAAGGAGAAAAGAAAAAAACUAAAACAGUUUCAGAAGGAAUAUCCUUUGAUAUAUCAGAAAAGAUUUCCAACCACGGAGAGUGAAGCAGCACUUUUUGGUGACAAm6ACCUACAAUCAAGCAACCAAUGCUGAUUUUAAGAAAACCAAAGUUCCGUAGUCUAAGAUAACUAACUGAAUUAAAAAUUAUGUAAUACUUGUGGAACUUUGAUAAAUGAAGCCAUAUCUGAGAAUGUAGCUACUCAAAAGGAAGUCUGUCAUUAAUAAGGUAUUUCUAAAUAAACACAUUAUGUAAGGAAGUGCCAAAAUAGUUAUCAAUGUGAGACUCUUAGGAAACUAACUAGAUCUCAAUUGAGAGCACAUAACAAUAGAUGAUACCAAAUACUUUUUGUUUUUAACACAGCUAUCCAGUAAGGCUAUCAUGAUGUGUGCUAAAAUUUUAUUUACUUGAAUUUUGAAAACUGAGCUGUGUUAGGGAUUAAACUAUAAUUCUGUUCUUAAAAGAAAAUUUAUCUGCAAAUGUGCAAGUUCUGAGAUAUUAGCUAAUGAAUUAGUUGUUUGGGGUUACUUCUUUGUUUCUAAGUAUAAGAAUGUGAAGAAUAUUUGAAAACUCAAUGAAAUAAUUCUCAGCUGCCAAAUGUUGCACUCUUUUAUAUAUUCUUUUUCCACUUUUGAUCUAUUUAUAUAUAUGUAUGUGUUUUUAAAAUAUGUGUAUAUUUUAUCAGAUUUGGUUUUGCCUUAAAUAUUAUCCCCAAUUGCUUCAGUCAUUCAUUUGUUCAGUAUAUAUAUUUUGAAUUCUAGUUUUCAUAAUCUAUUAGAAGAUGGGGAUAUAAAAGAAGUAUAAGGCAAUCAUAUAUUCAUUCAAAAGAUAUUUAUUUAGCAACUGCUAUGUGCCUUUCGUUGUUCCAGAUAUGCAGAGACAAUGAUAAAUAAAACAUAUAAUCUCUUCCAUAAGGUAUUUAUUUUUUAAUCAAGGGAGAUACACCUAUCAGAUGUUUAAAAUAACAACACUACCCACUGAAAUCAGGGCAUAUAGAAUCAUUCAGCUAAAGAGUGACUUCUAUGAUGAUGGAm6ACAGGUCUCUAAGCUAGUGGUUUUCAAACUGGUACACAUUAGACUCACCCGAGGAAUUUUAAAACAGCCUAUAUGCCCAGGGCCUAm6ACUUACACUAAUUAAAUCUGAAUUUUGGGGAUGUUGUAUAGGGAUUAGUAUUUUUUUUAAUCUAGGUGAUUCCAAUAUUCAGCCAACUGUGAGAAUCAAUGGCCUAAAUGCUUUUUAUAAACAUUUUUAUAAGUGUCAAGAUAAUGGCACAUUGACUYUAUUUUUUCAUUGGAAGAAAAUGCCUGCCAAGUAUAAAUGACUCUCAUCUUAAAACAAGGUUCUUCAGGUUUCUGCUUGAUUGACUUGGUACAAACUUGAAGCAAGUUGCCUUCUAAUUUUUACUCCAAGAUUGUUUCAUAUCUAUUCCUUAAGUGUAAAGAAAUAUAUAAUGCAUGGUUUGUAAUAAAAUCUUAAUGUUUAAUGACUGUU
Sequence (MODOMICS CODE ENCODING)	UAUAUCAAUACACCAGUGGCUGAAAUUAUCAUGAAACCAAAUGUUGGACAAGGCAGCACAAGUGUGCAAACAGCUAUGGAAAGUGAACUCGGAGAGUCUAGUGCCACAAUCAAUAAAAG2000000006ACUCUGCAAAAGUACAAUAGA2000000006ACUUUCAGAAAAUUCUUUACUUCCAGCUUCUUCUAUGUUGACUGGCACACAAAGUAAGGCUGUUGCUUUCAAUGCAUGCAAUAUUAACUUUGAGUGUUUACUAACUCUGUGUUUUGCUUACCUGGCUUUUCUUCCUUGAAGUUGCUUAAUUUUUUUUCCUCCAAGAGGAAUUAUUUAAAAAGACUUUUGUCUGUGACAUAACCAAGAUUUAUUCUGUUUACCUAAGGAACUUAUUUUCUUUUUUGCAAUUUCAUUUAUUCUGAGUCACUUUAUUUGUAAUAAGUGAAGAAUUUUAAUACUUAGAAAUAAGUUGUAAAGAAAAUAAUGAGAAUCUUACCAUGCUUUAGAGGAACGUAAUUUCUAGAAAUAGUUAAAAGAUGAAAUACUAAGAUAUUAUUUUACCUUCUUUAUAUAGCUGUAUAUACUGGUAGUAUGAAAGCAACUAGUGUCAUUGAUGAUUUUUGGGGGGGUAUUUUUGUAUUCUAGGCUUGCUGCAACCUCAUUUAGAGAGGGUUGCCAUCGAUGCUCUACAGUUAUGUUGUUUGUUACUUCCCCCACCAAAUCGUAGAAAGCUUCAACUUUUAAUGCGUAUGAUUUCCCGAAUGAGUCAAAAUGUUGAUAUGCCCAAACUUCAUGAUGCAAUGGGUACGAGGUCACUGAUGAUACAUACCUUUUCUCGAUGUGUGUUAUGCUGUGCUGAAGAAGUGGAUCUUGAUGAGCUUCUUGCUGGAAGAUUAGUUUCUUUCUUAAUGGAUCAUCAUCAGGAAAUUCUUCAAGUACCCUCUUACUUAC2000000006AGACUGCAGUGGAAAAACAUCUUGACUACUUAAAAAAGGGACAUAUUGAAAAUCCUGGAGAUGG2000000006ACUAUUUGCUCCUUUGCCAACUUACUCAUACUGUAAGCAGAUUAGUGCUCAGGAGUUUGAUGAGCAAAAAGUUUCUACCUCUCAAGCUGCAAUUGCAGAACUUUUAGAAAAUAUUAUUAAAAACAGGAGUUUACCUCUAAAGGAGAAAAGAAAAAAACUAAAACAGUUUCAGAAGGAAUAUCCUUUGAUAUAUCAGAAAAGAUUUCCAACCACGGAGAGUGAAGCAGCACUUUUUGGUGACAA2000000006ACCUACAAUCAAGCAACCAAUGCUGAUUUUAAGAAAACCAAAGUUCCGUAGUCUAAGAUAACUAACUGAAUUAAAAAUUAUGUAAUACUUGUGGAACUUUGAUAAAUGAAGCCAUAUCUGAGAAUGUAGCUACUCAAAAGGAAGUCUGUCAUUAAUAAGGUAUUUCUAAAUAAACACAUUAUGUAAGGAAGUGCCAAAAUAGUUAUCAAUGUGAGACUCUUAGGAAACUAACUAGAUCUCAAUUGAGAGCACAUAACAAUAGAUGAUACCAAAUACUUUUUGUUUUUAACACAGCUAUCCAGUAAGGCUAUCAUGAUGUGUGCUAAAAUUUUAUUUACUUGAAUUUUGAAAACUGAGCUGUGUUAGGGAUUAAACUAUAAUUCUGUUCUUAAAAGAAAAUUUAUCUGCAAAUGUGCAAGUUCUGAGAUAUUAGCUAAUGAAUUAGUUGUUUGGGGUUACUUCUUUGUUUCUAAGUAUAAGAAUGUGAAGAAUAUUUGAAAACUCAAUGAAAUAAUUCUCAGCUGCCAAAUGUUGCACUCUUUUAUAUAUUCUUUUUCCACUUUUGAUCUAUUUAUAUAUAUGUAUGUGUUUUUAAAAUAUGUGUAUAUUUUAUCAGAUUUGGUUUUGCCUUAAAUAUUAUCCCCAAUUGCUUCAGUCAUUCAUUUGUUCAGUAUAUAUAUUUUGAAUUCUAGUUUUCAUAAUCUAUUAGAAGAUGGGGAUAUAAAAGAAGUAUAAGGCAAUCAUAUAUUCAUUCAAAAGAUAUUUAUUUAGCAACUGCUAUGUGCCUUUCGUUGUUCCAGAUAUGCAGAGACAAUGAUAAAUAAAACAUAUAAUCUCUUCCAUAAGGUAUUUAUUUUUUAAUCAAGGGAGAUACACCUAUCAGAUGUUUAAAAUAACAACACUACCCACUGAAAUCAGGGCAUAUAGAAUCAUUCAGCUAAAGAGUGACUUCUAUGAUGAUGGA2000000006ACAGGUCUCUAAGCUAGUGGUUUUCAAACUGGUACACAUUAGACUCACCCGAGGAAUUUUAAAACAGCCUAUAUGCCCAGGGCCUA2000000006ACUUACACUAAUUAAAUCUGAAUUUUGGGGAUGUUGUAUAGGGAUUAGUAUUUUUUUUAAUCUAGGUGAUUCCAAUAUUCAGCCAACUGUGAGAAUCAAUGGCCUAAAUGCUUUUUAUAAACAUUUUUAUAAGUGUCAAGAUAAUGGCACAUUGACU2000000009UUAUUUUUUCAUUGGAAGAAAAUGCCUGCCAAGUAUAAAUGACUCUCAUCUUAAAACAAGGUUCUUCAGGUUUCUGCUUGAUUGACUUGGUACAAACUUGAAGCAAGUUGCCUUCUAAUUUUUACUCCAAGAUUGUUUCAUAUCUAUUCCUUAAGUGUAAAGAAAUAUAUAAUGCAUGGUUUGUAAUAAAAUCUUAAUGUUUAAUGACUGUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	120	141	933	997	1240	2204	2290	2447
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y
Genomic Coordinates	1:68482119:-	1:68482098:-	1:68479187:-	1:68477952:-	1:68476992:-	1:68476028:-	1:68475942:-	1:68475785:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	Lny8GcCeVGc9 UKen6WEino9G dknfVe6BK8aP	BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi dknfVe6BK8aP	3kRDPWwiRCgi L6w2k2VEv4EY	4HMi5ykupT9V 6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se WiQcrNTGZHPT BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8