General Data

RNA Type	unknown
Original Source	Sci-ModoM
Transcript ID:	ENST00000528930
Gene ID:	ENSG00000157216
Gene Name:	SSBP3
Sequence (UNICHARACTER ENCODING)	UCUCUUCCCCACCACUCAUCAAACCCCACCUCUUCUCACCGCCCAGCCCCAGGAAACAUCUUCAUUUCUAAUUUCUUCCUUUUGUUAACUUGGGAGAGGGCCAGCAUGACAGCUCCAGGCCUGCUGCCAGGUUCCAGUCCCAGCUCCUCCACCUCCAGCCUCUGGGACCUCAAGCAAAGCGUUUCCUCUCACUGCUUCUGUUUCCUCACCUGUGAAGUGGGGAUGAGAAGCACAGAUGUUUUGGUCCCUGGCCUGACAUGGUCGGAGAGCUGUCCACAUGUGCCUCUGUCUGGGGAACCACACUCUCCACACGGGGGAUGGAGAGGGCCCUGUGGUGGGAUCCGAGAGGCUCAGUUUCAGAGGUGCCUCUGUGUGGAGUUGGGUGGCAGUGGGCCAGUCCCUCUCCCUCACCUGGGUCAUUGGAAUGAGCACCUCUGCCCUGCAGCUUAGAGGGCCGAGGUGAGGACCCUGGCCCAGCUGCCAGGCAGGACAUGUCCGAGUGUGAGCAGAGCCUGCCGGAGCAGGGGUUCCCCAGGGCCAGGACUCAAGCGUGGCUGCAGCCCCCUGCCUGUGAGGGGUGCAGAGGGCCAGGGCCCGCUGAGCUGCCAUGCCCUGUGCUUCUUCCCCAGUUCCCGAUGGGUCCCGGCUCGGACGGUCCGAUGGGCGGCAUGGGUGGCAUGGAGCCACACCACAUGAAUGGAUCAUUAGGGUCAGGCGACAUAGACGGACUUCCAAAAAAUUCUCCUAACAACAUAAGUGGCAUUAGCAAUCCUCCAGGCACCCCUCGAGAUGACGGCGAGCUAGGAGGGAACUUCCPCCACUCCUUUCAGAACGACAAUUAUUCUCCAAGCAUGACGAUGAGUGUGUGAUCCCCCCUUCUCCGAGACGCUGAGAGAGCAGGCAUUGCAGGCGGGAAGAUGCCAGAAAUUAUGCAAGAAGUGAGGUGUCAUUAUCCAGGAGCUGGUGGGGAGGGCAUCUCCCUGCUCCCCUCAACCCCCPCCCACCCCAPCCACGCCCCCUACCUUUCCCAAUUUUAGUUUCAUGCAAUAAAAAGGCCAAACUUUUUAUUCCAUAAAACAAGAAGGЖCAAAACUCUCAAAAAUGUAUUUCAAGUCAGUGACCAGAAAAAUCCCACCCCUUGCCCUUUCCCCAAAGGACCUUUUCUGUACAUGACACUUUUUUGUUGUUUUUUGUUUGGGGUUUUACCAUUGUUGGGAUUUUUUUAUUUGUUUUCAGGGGGGUUUUUUGGGGGAAAAUUUUUUUAAAUGGAAGCUUCUAGCAAGCCCCCCACCCCAAUCAACCUCUAUGCUUUCUUCUUAAAAAAAAAAAAAAAGGAAAAAGGAAAAAAAAAAAAGGAAAACCAGAAGCCCUGCUGUCUGUCUGUGCCCAAGCCCUUCCACCAGAAAAGCUAGUCUAGGUGUGAGAGCCCACAUUGUCUGUAGCCAUCAAAAAUAAUAAUAAUAAЖCUGGЖCAGUUUACAAUCGUUGGUUUCUUUCAAAAGGCCUUUUUUGGAAAGAAGAAAAGGCAGUCACCGUUUUCCACUUGGGGUUUUGGUUUGUGCAACAGGCAGGGGAGGAGUGGGGACGCGUUUGUUCUAGCUUGAUUUCCAUGGCAACAGCAGCGGCACGCUUGGACCCCAGAACCCAGCACCCUCAUCCUGUGGCCAGAGGGGCCGGACCACUGACCCCUUUCAGGAUUCCACCACAGCCCAGACCGUCACCGUGACCCGGUGGCAUGCACUGUUCCCAGGACACCCUCCUCCUCUCCUGGACCUCCCUUCCGUCCUGGCCUCCCUGCCUCUCCAGCCCCUCCUCUGCCCCCACCCCAGUCUUCCCAGUGAGAAUCCUGCCAGCUGGGUGGUGGCCUGGCGCAGAGUGGGAGAGGCUGCCACUGACAGGAUGGCUAUGACCUGGGACAUGGAAACAGUGACCUCCGCGUUCUGGUCCCGAGAUCCUCGCAUCAGCGUCAUCGUGUGCACCGGCUUGGGGGGCUGGAGUUCCGGUUUUCUUUGUUUUUUCUCUUUAUUCGUCCUUUCUCAAAGAUGGGAUACUGAUCAGAAUUGCUCUGUAUAUGCUUGGGЖCUGGAUGGAAAGЖCUUUGGAGCAGCUGUGGGGGGUGGGGGGACACCGACAACCAAЖCAGACGUGCUGGCUCCAGUCCUGUUUUUACUUUCAAAAACCAACAAGCCCGACAGUGGAGCCUGUCCCCPCCCGGGAGGGUGCUCAUGGCCCCACUCACCUCAUCACCCCACGGAAACCUUUGUGUCUUGCCCUGGAAGACACCCGAAUUCUUUGUACAUUGACAUGCCCUUCUCCUUCCPCCCUCCCCUGUAGCUGGUCUUUGUUUUACUCCCUCCCUUUCUGAUCCAUGUAUAUCAUAUUAUGUGAGAUAUCAUCUGCCUGAAAAAAGЖCUUUGUGCGGAUUAUUGGGAACAUUGUAGCUGUUUCUGUGUUUUUUCUUACCUUGUAGUCUGGUUCUGAAUUAAGAGAGGAAAAAAAAGUAAUUAUGAUACAUUGUAGUUUGUGUACGAUAUAUGUUGAUAACGUUUUAUUAAAGGGACAUCUUUUUUCCGC
Sequence (SHORT NAMES ENCODING)	UCUCUUCCCCACCACUCAUCAAACCCCACCUCUUCUCACCGCCCAGCCCCAGGAAACAUCUUCAUUUCUAAUUUCUUCCUUUUGUUAACUUGGGAGAGGGCCAGCAUGACAGCUCCAGGCCUGCUGCCAGGUUCCAGUCCCAGCUCCUCCACCUCCAGCCUCUGGGACCUCAAGCAAAGCGUUUCCUCUCACUGCUUCUGUUUCCUCACCUGUGAAGUGGGGAUGAGAAGCACAGAUGUUUUGGUCCCUGGCCUGACAUGGUCGGAGAGCUGUCCACAUGUGCCUCUGUCUGGGGAACCACACUCUCCACACGGGGGAUGGAGAGGGCCCUGUGGUGGGAUCCGAGAGGCUCAGUUUCAGAGGUGCCUCUGUGUGGAGUUGGGUGGCAGUGGGCCAGUCCCUCUCCCUCACCUGGGUCAUUGGAAUGAGCACCUCUGCCCUGCAGCUUAGAGGGCCGAGGUGAGGACCCUGGCCCAGCUGCCAGGCAGGACAUGUCCGAGUGUGAGCAGAGCCUGCCGGAGCAGGGGUUCCCCAGGGCCAGGACUCAAGCGUGGCUGCAGCCCCCUGCCUGUGAGGGGUGCAGAGGGCCAGGGCCCGCUGAGCUGCCAUGCCCUGUGCUUCUUCCCCAGUUCCCGAUGGGUCCCGGCUCGGACGGUCCGAUGGGCGGCAUGGGUGGCAUGGAGCCACACCACAUGAAUGGAUCAUUAGGGUCAGGCGACAUAGACGGACUUCCAAAAAAUUCUCCUAACAACAUAAGUGGCAUUAGCAAUCCUCCAGGCACCCCUCGAGAUGACGGCGAGCUAGGAGGGAACUUCCYCCACUCCUUUCAGAACGACAAUUAUUCUCCAAGCAUGACGAUGAGUGUGUGAUCCCCCCUUCUCCGAGACGCUGAGAGAGCAGGCAUUGCAGGCGGGAAGAUGCCAGAAAUUAUGCAAGAAGUGAGGUGUCAUUAUCCAGGAGCUGGUGGGGAGGGCAUCUCCCUGCUCCCCUCAACCCCCYCCCACCCCAYCCACGCCCCCUACCUUUCCCAAUUUUAGUUUCAUGCAAUAAAAAGGCCAAACUUUUUAUUCCAUAAAACAAGAAGGm6ACAAAACUCUCAAAAAUGUAUUUCAAGUCAGUGACCAGAAAAAUCCCACCCCUUGCCCUUUCCCCAAAGGACCUUUUCUGUACAUGACACUUUUUUGUUGUUUUUUGUUUGGGGUUUUACCAUUGUUGGGAUUUUUUUAUUUGUUUUCAGGGGGGUUUUUUGGGGGAAAAUUUUUUUAAAUGGAAGCUUCUAGCAAGCCCCCCACCCCAAUCAACCUCUAUGCUUUCUUCUUAAAAAAAAAAAAAAAGGAAAAAGGAAAAAAAAAAAAGGAAAACCAGAAGCCCUGCUGUCUGUCUGUGCCCAAGCCCUUCCACCAGAAAAGCUAGUCUAGGUGUGAGAGCCCACAUUGUCUGUAGCCAUCAAAAAUAAUAAUAAUAAm6ACUGGm6ACAGUUUACAAUCGUUGGUUUCUUUCAAAAGGCCUUUUUUGGAAAGAAGAAAAGGCAGUCACCGUUUUCCACUUGGGGUUUUGGUUUGUGCAACAGGCAGGGGAGGAGUGGGGACGCGUUUGUUCUAGCUUGAUUUCCAUGGCAACAGCAGCGGCACGCUUGGACCCCAGAACCCAGCACCCUCAUCCUGUGGCCAGAGGGGCCGGACCACUGACCCCUUUCAGGAUUCCACCACAGCCCAGACCGUCACCGUGACCCGGUGGCAUGCACUGUUCCCAGGACACCCUCCUCCUCUCCUGGACCUCCCUUCCGUCCUGGCCUCCCUGCCUCUCCAGCCCCUCCUCUGCCCCCACCCCAGUCUUCCCAGUGAGAAUCCUGCCAGCUGGGUGGUGGCCUGGCGCAGAGUGGGAGAGGCUGCCACUGACAGGAUGGCUAUGACCUGGGACAUGGAAACAGUGACCUCCGCGUUCUGGUCCCGAGAUCCUCGCAUCAGCGUCAUCGUGUGCACCGGCUUGGGGGGCUGGAGUUCCGGUUUUCUUUGUUUUUUCUCUUUAUUCGUCCUUUCUCAAAGAUGGGAUACUGAUCAGAAUUGCUCUGUAUAUGCUUGGGm6ACUGGAUGGAAAGm6ACUUUGGAGCAGCUGUGGGGGGUGGGGGGACACCGACAACCAAm6ACAGACGUGCUGGCUCCAGUCCUGUUUUUACUUUCAAAAACCAACAAGCCCGACAGUGGAGCCUGUCCCCYCCCGGGAGGGUGCUCAUGGCCCCACUCACCUCAUCACCCCACGGAAACCUUUGUGUCUUGCCCUGGAAGACACCCGAAUUCUUUGUACAUUGACAUGCCCUUCUCCUUCCYCCCUCCCCUGUAGCUGGUCUUUGUUUUACUCCCUCCCUUUCUGAUCCAUGUAUAUCAUAUUAUGUGAGAUAUCAUCUGCCUGAAAAAAGm6ACUUUGUGCGGAUUAUUGGGAACAUUGUAGCUGUUUCUGUGUUUUUUCUUACCUUGUAGUCUGGUUCUGAAUUAAGAGAGGAAAAAAAAGUAAUUAUGAUACAUUGUAGUUUGUGUACGAUAUAUGUUGAUAACGUUUUAUUAAAGGGACAUCUUUUUUCCGC
Sequence (MODOMICS CODE ENCODING)	UCUCUUCCCCACCACUCAUCAAACCCCACCUCUUCUCACCGCCCAGCCCCAGGAAACAUCUUCAUUUCUAAUUUCUUCCUUUUGUUAACUUGGGAGAGGGCCAGCAUGACAGCUCCAGGCCUGCUGCCAGGUUCCAGUCCCAGCUCCUCCACCUCCAGCCUCUGGGACCUCAAGCAAAGCGUUUCCUCUCACUGCUUCUGUUUCCUCACCUGUGAAGUGGGGAUGAGAAGCACAGAUGUUUUGGUCCCUGGCCUGACAUGGUCGGAGAGCUGUCCACAUGUGCCUCUGUCUGGGGAACCACACUCUCCACACGGGGGAUGGAGAGGGCCCUGUGGUGGGAUCCGAGAGGCUCAGUUUCAGAGGUGCCUCUGUGUGGAGUUGGGUGGCAGUGGGCCAGUCCCUCUCCCUCACCUGGGUCAUUGGAAUGAGCACCUCUGCCCUGCAGCUUAGAGGGCCGAGGUGAGGACCCUGGCCCAGCUGCCAGGCAGGACAUGUCCGAGUGUGAGCAGAGCCUGCCGGAGCAGGGGUUCCCCAGGGCCAGGACUCAAGCGUGGCUGCAGCCCCCUGCCUGUGAGGGGUGCAGAGGGCCAGGGCCCGCUGAGCUGCCAUGCCCUGUGCUUCUUCCCCAGUUCCCGAUGGGUCCCGGCUCGGACGGUCCGAUGGGCGGCAUGGGUGGCAUGGAGCCACACCACAUGAAUGGAUCAUUAGGGUCAGGCGACAUAGACGGACUUCCAAAAAAUUCUCCUAACAACAUAAGUGGCAUUAGCAAUCCUCCAGGCACCCCUCGAGAUGACGGCGAGCUAGGAGGGAACUUCC2000000009UCCACUCCUUUCAGAACGACAAUUAUUCUCCAAGCAUGACGAUGAGUGUGUGAUCCCCCCUUCUCCGAGACGCUGAGAGAGCAGGCAUUGCAGGCGGGAAGAUGCCAGAAAUUAUGCAAGAAGUGAGGUGUCAUUAUCCAGGAGCUGGUGGGGAGGGCAUCUCCCUGCUCCCCUCAACCCCC2000000009UCCCACCCCA2000000009UCCACGCCCCCUACCUUUCCCAAUUUUAGUUUCAUGCAAUAAAAAGGCCAAACUUUUUAUUCCAUAAAACAAGAAGG2000000006ACAAAACUCUCAAAAAUGUAUUUCAAGUCAGUGACCAGAAAAAUCCCACCCCUUGCCCUUUCCCCAAAGGACCUUUUCUGUACAUGACACUUUUUUGUUGUUUUUUGUUUGGGGUUUUACCAUUGUUGGGAUUUUUUUAUUUGUUUUCAGGGGGGUUUUUUGGGGGAAAAUUUUUUUAAAUGGAAGCUUCUAGCAAGCCCCCCACCCCAAUCAACCUCUAUGCUUUCUUCUUAAAAAAAAAAAAAAAGGAAAAAGGAAAAAAAAAAAAGGAAAACCAGAAGCCCUGCUGUCUGUCUGUGCCCAAGCCCUUCCACCAGAAAAGCUAGUCUAGGUGUGAGAGCCCACAUUGUCUGUAGCCAUCAAAAAUAAUAAUAAUAA2000000006ACUGG2000000006ACAGUUUACAAUCGUUGGUUUCUUUCAAAAGGCCUUUUUUGGAAAGAAGAAAAGGCAGUCACCGUUUUCCACUUGGGGUUUUGGUUUGUGCAACAGGCAGGGGAGGAGUGGGGACGCGUUUGUUCUAGCUUGAUUUCCAUGGCAACAGCAGCGGCACGCUUGGACCCCAGAACCCAGCACCCUCAUCCUGUGGCCAGAGGGGCCGGACCACUGACCCCUUUCAGGAUUCCACCACAGCCCAGACCGUCACCGUGACCCGGUGGCAUGCACUGUUCCCAGGACACCCUCCUCCUCUCCUGGACCUCCCUUCCGUCCUGGCCUCCCUGCCUCUCCAGCCCCUCCUCUGCCCCCACCCCAGUCUUCCCAGUGAGAAUCCUGCCAGCUGGGUGGUGGCCUGGCGCAGAGUGGGAGAGGCUGCCACUGACAGGAUGGCUAUGACCUGGGACAUGGAAACAGUGACCUCCGCGUUCUGGUCCCGAGAUCCUCGCAUCAGCGUCAUCGUGUGCACCGGCUUGGGGGGCUGGAGUUCCGGUUUUCUUUGUUUUUUCUCUUUAUUCGUCCUUUCUCAAAGAUGGGAUACUGAUCAGAAUUGCUCUGUAUAUGCUUGGG2000000006ACUGGAUGGAAAG2000000006ACUUUGGAGCAGCUGUGGGGGGUGGGGGGACACCGACAACCAA2000000006ACAGACGUGCUGGCUCCAGUCCUGUUUUUACUUUCAAAAACCAACAAGCCCGACAGUGGAGCCUGUCCCC2000000009UCCCGGGAGGGUGCUCAUGGCCCCACUCACCUCAUCACCCCACGGAAACCUUUGUGUCUUGCCCUGGAAGACACCCGAAUUCUUUGUACAUUGACAUGCCCUUCUCCUUCC2000000009UCCCUCCCCUGUAGCUGGUCUUUGUUUUACUCCCUCCCUUUCUGAUCCAUGUAUAUCAUAUUAUGUGAGAUAUCAUCUGCCUGAAAAAAG2000000006ACUUUGUGCGGAUUAUUGGGAACAUUGUAGCUGUUUCUGUGUUUUUUCUUACCUUGUAGUCUGGUUCUGAAUUAAGAGAGGAAAAAAAAGUAAUUAUGAUACAUUGUAGUUUGUGUACGAUAUAUGUUGAUAACGUUUUAUUAAAGGGACAUCUUUUUUCCGC

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	817	999	1009	1086	1464	1469	2078	2091	2134	2204	2315	2405
Modification Positions	Y	Y	Y	m6A	m6A	m6A	m6A	m6A	m6A	Y	Y	m6A
Genomic Coordinates	1:54228277:-	1:54227001:-	1:54226991:-	1:54226914:-	1:54226536:-	1:54226531:-	1:54225922:-	1:54225909:-	1:54225866:-	1:54225796:-	1:54225685:-	1:54225595:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6AyXsheySjfx 6UuHp6YApVKv jNkxUQNx8GRd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	4HMi5ykupT9V 5aTkEfEpX8Xm 6UuHp6YApVKv jNkxUQNx8GRd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm kx7BHU7ZycYE iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6UuHp6YApVKv jNkxUQNx8GRd msuJfBpJvM5H VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP eGNFqdoGxzRm kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H NjZ8bGGJsNSR QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 8cMbzB4aD5Se 93arJtwJmuS9 BkoLW2CBToyL KENzb7mwdBd9 KjeH7Nsffuas PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda Yfn77uLS5tv8	6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	6UuHp6YApVKv gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn 93arJtwJmuS9 KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 PF5iqBNSbHaa UKen6WEino9G BtsJQJ3DteUq dknfVe6BK8aP kx7BHU7ZycYE S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8