General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000474048
Gene ID:	ENSG00000134748
Gene Name:	PRPF38A
Sequence (UNICHARACTER ENCODING)	UGGUCGCCUAAGCUGUUUAGUGAAACUUCUUCCACCUUUCUCCAUUCCUCUAGGUGCUUUUUCUGAACCUGGAUGUGAGGCAUUAAAGGAUCCGACGGAAAUAGAAUUGAAGGCAUUCUAAAAUGGCUAACCGUACAGUGAAGGAUGCGCACAGCAUCCAUGGCACCAACCCUCAAUAUCUGGUGGAGAAGAUCAUUCGAACGCGAAUCUAUGAGUCCAAGUACUGGAAAGAGGAGUGCUUUGGACUUACAGCUGAACUUGUAGUCGAUAAAGCCAUGGAGUUAAGAAACGCUAUGUAUUAGAGGAAGCUGAGCAACUGGAGCCUCGAGUUAGUGCUCUGGAAGAGGACAUGGAUGAUGUGGAGUCCAGUGAAGAGGAAGAAGAGGAGGAUGAGAAGUUGGAAAGAGUGCCAUCACCUGAUCACCGCCGGAGAAGCUACCGAGACUUGGACAAGCCCCGUCGCUCUCCCACACUGCGCUACAGGAGGAGUAGGAGCCGGUCUCCCAGAAGGCGGAGUCGAUCUCCCAAAAGGAGAAGCCCCUCCCCUCGCCGAGAAAGGCAUCGGAGCAAGAGUCCAAGACGUCACCGCAGCAGGUCCCGAGAUCGGCGGCACAGAUCCCGUUCCAAGUCCCCAGGUCAUCACCGUAGUCACAGACACAGGAGCCACUCAAAGUCUCCCGAAAGGUCUAAGAAGAGCCACAAGAAGAGCCGGAGAGGGAAUGAGUAAUGGЖCUCAGUUUGGUUUUAGUCCACAUGGCCUCCUGUGGAUAUAAGGAUAUCUGUAUGUGGAAGGAUUAAGAUCUCCCCCAGGCAGCUAUAAGAAUAUUUUAGUUUUUUUCUUAUCAAGUUUCUCAACCUPUAUUUUUAAUGAAGGAGGUGCUGAGUUUUGUAUCUUUUUAAUCAUAAUCAACAUCAGUUUUUGACCCAACUAACCUUGACUGUAUUCAAACUUAUGAGAGUAUAAAGGAUCUGGAGGUUGGGGAUAUGACUGACAAGGAAAGGCUGUGGCCACCUGAUGACCCUUUCCCUUUUUAUUAAЖCCGGACACACCUGUUUCCCAU
Sequence (SHORT NAMES ENCODING)	UGGUCGCCUAAGCUGUUUAGUGAAACUUCUUCCACCUUUCUCCAUUCCUCUAGGUGCUUUUUCUGAACCUGGAUGUGAGGCAUUAAAGGAUCCGACGGAAAUAGAAUUGAAGGCAUUCUAAAAUGGCUAACCGUACAGUGAAGGAUGCGCACAGCAUCCAUGGCACCAACCCUCAAUAUCUGGUGGAGAAGAUCAUUCGAACGCGAAUCUAUGAGUCCAAGUACUGGAAAGAGGAGUGCUUUGGACUUACAGCUGAACUUGUAGUCGAUAAAGCCAUGGAGUUAAGAAACGCUAUGUAUUAGAGGAAGCUGAGCAACUGGAGCCUCGAGUUAGUGCUCUGGAAGAGGACAUGGAUGAUGUGGAGUCCAGUGAAGAGGAAGAAGAGGAGGAUGAGAAGUUGGAAAGAGUGCCAUCACCUGAUCACCGCCGGAGAAGCUACCGAGACUUGGACAAGCCCCGUCGCUCUCCCACACUGCGCUACAGGAGGAGUAGGAGCCGGUCUCCCAGAAGGCGGAGUCGAUCUCCCAAAAGGAGAAGCCCCUCCCCUCGCCGAGAAAGGCAUCGGAGCAAGAGUCCAAGACGUCACCGCAGCAGGUCCCGAGAUCGGCGGCACAGAUCCCGUUCCAAGUCCCCAGGUCAUCACCGUAGUCACAGACACAGGAGCCACUCAAAGUCUCCCGAAAGGUCUAAGAAGAGCCACAAGAAGAGCCGGAGAGGGAAUGAGUAAUGGm6ACUCAGUUUGGUUUUAGUCCACAUGGCCUCCUGUGGAUAUAAGGAUAUCUGUAUGUGGAAGGAUUAAGAUCUCCCCCAGGCAGCUAUAAGAAUAUUUUAGUUUUUUUCUUAUCAAGUUUCUCAACCUYUAUUUUUAAUGAAGGAGGUGCUGAGUUUUGUAUCUUUUUAAUCAUAAUCAACAUCAGUUUUUGACCCAACUAACCUUGACUGUAUUCAAACUUAUGAGAGUAUAAAGGAUCUGGAGGUUGGGGAUAUGACUGACAAGGAAAGGCUGUGGCCACCUGAUGACCCUUUCCCUUUUUAUUAAm6ACCGGACACACCUGUUUCCCAU
Sequence (MODOMICS CODE ENCODING)	UGGUCGCCUAAGCUGUUUAGUGAAACUUCUUCCACCUUUCUCCAUUCCUCUAGGUGCUUUUUCUGAACCUGGAUGUGAGGCAUUAAAGGAUCCGACGGAAAUAGAAUUGAAGGCAUUCUAAAAUGGCUAACCGUACAGUGAAGGAUGCGCACAGCAUCCAUGGCACCAACCCUCAAUAUCUGGUGGAGAAGAUCAUUCGAACGCGAAUCUAUGAGUCCAAGUACUGGAAAGAGGAGUGCUUUGGACUUACAGCUGAACUUGUAGUCGAUAAAGCCAUGGAGUUAAGAAACGCUAUGUAUUAGAGGAAGCUGAGCAACUGGAGCCUCGAGUUAGUGCUCUGGAAGAGGACAUGGAUGAUGUGGAGUCCAGUGAAGAGGAAGAAGAGGAGGAUGAGAAGUUGGAAAGAGUGCCAUCACCUGAUCACCGCCGGAGAAGCUACCGAGACUUGGACAAGCCCCGUCGCUCUCCCACACUGCGCUACAGGAGGAGUAGGAGCCGGUCUCCCAGAAGGCGGAGUCGAUCUCCCAAAAGGAGAAGCCCCUCCCCUCGCCGAGAAAGGCAUCGGAGCAAGAGUCCAAGACGUCACCGCAGCAGGUCCCGAGAUCGGCGGCACAGAUCCCGUUCCAAGUCCCCAGGUCAUCACCGUAGUCACAGACACAGGAGCCACUCAAAGUCUCCCGAAAGGUCUAAGAAGAGCCACAAGAAGAGCCGGAGAGGGAAUGAGUAAUGG2000000006ACUCAGUUUGGUUUUAGUCCACAUGGCCUCCUGUGGAUAUAAGGAUAUCUGUAUGUGGAAGGAUUAAGAUCUCCCCCAGGCAGCUAUAAGAAUAUUUUAGUUUUUUUCUUAUCAAGUUUCUCAACCU2000000009UUAUUUUUAAUGAAGGAGGUGCUGAGUUUUGUAUCUUUUUAAUCAUAAUCAACAUCAGUUUUUGACCCAACUAACCUUGACUGUAUUCAAACUUAUGAGAGUAUAAAGGAUCUGGAGGUUGGGGAUAUGACUGACAAGGAAAGGCUGUGGCCACCUGAUGACCCUUUCCCUUUUUAUUAA2000000006ACCGGACACACCUGUUUCCCAU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	731	858	1038
Modification Positions	m6A	Y	m6A
Genomic Coordinates	1:52416694:+	1:52416821:+	1:52417001:+
Level of Experimental Evidence	3	3	3
Level of Experimental Reliability	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 4HMi5ykupT9V 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML dA7YoLwHrzgR JASnTTw2HeNE ZuM5xpZmNuDL BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ oZ9Kp5NX8Hv5 XWZVGdLC6gGJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda a7o5Kmjr4Tdp Yfn77uLS5tv8