General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000479285
Gene ID:	ENSG00000134262
Gene Name:	AP4B1
Sequence (UNICHARACTER ENCODING)	UUUUUCUGAUCUUGGCAAAAAUGUUUCCCCACGUACAAЖCUGAUGUCCUUGUGCGGGUCAAGGGЖCCUUUGCUAGCUGCCUGUUCUUCAGAGAGCCGUGAGCUCUGUUUUGUUGCUCUUUGUCAUGUACGCCAGAUCUUGCAUAGUUUACCAGGUCACUPUAGCAGCCACUACAAAAAGUUUUUUUGCUCCUACUCGGAGCCCCACUACAUCAAЖCUACAGAAAGUGGAGGUGCUGUGUGAACUGGUGAACGAUGAGAAUGUGCAGCAGGUGCUAGAGGAGCUUCGAGGGUACUGCACGGAUGUGUCUGCGGACUUUGCACAGGCUGCCAUCUUUGCCAUAGGUGGCAUUGCCAGGACUUACACAGAUCAAUGUGUUCAGAUUUUAЖCAGAGUUGCUGGGUCUUCGACAAGAGCACAUUACCACAGUGGUGGUGCAGACUUUCCGAGЖCCUGGUUUGGUUGUGUCCUCAGUGUACUGAAGCUGUAUGUCAGGCCCUGCCCGGCUGUGAAGAGAACAUUCAAGAUAGUGAGGGGAAGCAAGCACUUAUUUGGCUACUUGGUGUCCAUGGGGAAAGAAUUCCUAAUGCUCCUUAUGUGUUAGAGGACUUUGUUGAGAAUGUGAAGUCGGAAACAUUUCCAGCUGUUAAGAUGGAGCUGCUCACUGCUUUGCUGCGCCUUUUCCUCUCCCGACCUGCUGAGUGCCAGGACAUGCUAGGACGUUUGUUGUAUUACUGCAUAGGUGGGUUUUUCAGAAGGAAAUAGUAUUUGCCAUGACCCAUAGUAAAAAUUCUUAAUAGCUUUCAUUGUUUGGUGAGUCACGUCUGGGACCCGAGAAGAAAAUGUGAAUGCUUCCUAGGUUUUCCUCUCUCCUUCAUUUUUUUCUCCUAUUAUGGUUGGCACAAGAGUAGGAGGAAAGUGGUUUUGUUUUUAAUGAAGUCAAUCUGUUGUCUUACCUCAGAGGAAGAAAAAGAUAUGGCUGUACGGGACCGAGGUCUCUUCUAUUAUCGCCUCCUCUUAGUUGGCAUUGAUGAAGUUAAGCGGAUUCUGUGUAGCCCUAAAUCUGACCCUACUCUUGGACUUUUGGAGGAUCCGGCAGAAAGACCUGUGAAUAGCUGGGCCUCAGACUUCAACACACUGGUGCCAGUGUAUGGCAAAGCCCACUGGGCAACUAUCUCUAAAUGCCAGGGGGCAGAGCGUUGUGACCCAGAGCUUCCUAAAACUUCAPCCUUUGCCGCAUCAGGUAAAAACAGUCCUUACCUUAAAUCUUGUCAUGAUAAAUCUUUACCUUUUCAAUGAUUGGUGGAAAGUAGAGUAUCUUAGCACUAAACCUCAGACUGUUGCCUGAAUUUGAAGCAUUUGUGAGCAAGAAAGAGGUUCGUCACUGGUUAUUUCAGCCAUUUGUCCAAAAAUAAAAGUCACAUUGUGUACAUUUGGGAAUUUGGAUAAAAAACUUAGCUCCUACAGAUUAAGAACAUCUUUCACACAAGUUUUCUGUCUCUUUUAGGACCCUUGAUUCCUGAAGAGAACAAGGAGAGGGUACAAGAACUCCCUGAUUCUGGAGCCCUCAUGCUAGUCCCCAAUCGCCAGCUUACUGCUGAUUAUUUUGAGAAAЖCUUGGCUUAGCCUUAAAGUUGCUCAUCAGCAAGUGUUGCCUUGGCGGGGAGAAUUCCAUCCUGACACCCUCCAGAUGGCUCUUCAAGUAGUGAACAPCCAGACCAUCGCAAUGAGUAGGGCUGGGUCUCGGCCAUGGAAAGCAUACCUCAGUGCUCAGGAUGAUACUGGCUGUCUGUUCUUAЖCAGAЖCUGCUAUUGGAGCCUGGAAЖCUCAGAAAUGCAGAUCUCUGUGAAACAAAAUGAAGCAAGAACGGAGACGCUGAAUAGUUUUAUUUCUGUAUUAGAAACUGUGAUUGGAACAAUUGAAGAAAUAAAAUCAUAЖCAGAGUCUU
Sequence (SHORT NAMES ENCODING)	UUUUUCUGAUCUUGGCAAAAAUGUUUCCCCACGUACAAm6ACUGAUGUCCUUGUGCGGGUCAAGGGm6ACCUUUGCUAGCUGCCUGUUCUUCAGAGAGCCGUGAGCUCUGUUUUGUUGCUCUUUGUCAUGUACGCCAGAUCUUGCAUAGUUUACCAGGUCACUYUAGCAGCCACUACAAAAAGUUUUUUUGCUCCUACUCGGAGCCCCACUACAUCAAm6ACUACAGAAAGUGGAGGUGCUGUGUGAACUGGUGAACGAUGAGAAUGUGCAGCAGGUGCUAGAGGAGCUUCGAGGGUACUGCACGGAUGUGUCUGCGGACUUUGCACAGGCUGCCAUCUUUGCCAUAGGUGGCAUUGCCAGGACUUACACAGAUCAAUGUGUUCAGAUUUUAm6ACAGAGUUGCUGGGUCUUCGACAAGAGCACAUUACCACAGUGGUGGUGCAGACUUUCCGAGm6ACCUGGUUUGGUUGUGUCCUCAGUGUACUGAAGCUGUAUGUCAGGCCCUGCCCGGCUGUGAAGAGAACAUUCAAGAUAGUGAGGGGAAGCAAGCACUUAUUUGGCUACUUGGUGUCCAUGGGGAAAGAAUUCCUAAUGCUCCUUAUGUGUUAGAGGACUUUGUUGAGAAUGUGAAGUCGGAAACAUUUCCAGCUGUUAAGAUGGAGCUGCUCACUGCUUUGCUGCGCCUUUUCCUCUCCCGACCUGCUGAGUGCCAGGACAUGCUAGGACGUUUGUUGUAUUACUGCAUAGGUGGGUUUUUCAGAAGGAAAUAGUAUUUGCCAUGACCCAUAGUAAAAAUUCUUAAUAGCUUUCAUUGUUUGGUGAGUCACGUCUGGGACCCGAGAAGAAAAUGUGAAUGCUUCCUAGGUUUUCCUCUCUCCUUCAUUUUUUUCUCCUAUUAUGGUUGGCACAAGAGUAGGAGGAAAGUGGUUUUGUUUUUAAUGAAGUCAAUCUGUUGUCUUACCUCAGAGGAAGAAAAAGAUAUGGCUGUACGGGACCGAGGUCUCUUCUAUUAUCGCCUCCUCUUAGUUGGCAUUGAUGAAGUUAAGCGGAUUCUGUGUAGCCCUAAAUCUGACCCUACUCUUGGACUUUUGGAGGAUCCGGCAGAAAGACCUGUGAAUAGCUGGGCCUCAGACUUCAACACACUGGUGCCAGUGUAUGGCAAAGCCCACUGGGCAACUAUCUCUAAAUGCCAGGGGGCAGAGCGUUGUGACCCAGAGCUUCCUAAAACUUCAYCCUUUGCCGCAUCAGGUAAAAACAGUCCUUACCUUAAAUCUUGUCAUGAUAAAUCUUUACCUUUUCAAUGAUUGGUGGAAAGUAGAGUAUCUUAGCACUAAACCUCAGACUGUUGCCUGAAUUUGAAGCAUUUGUGAGCAAGAAAGAGGUUCGUCACUGGUUAUUUCAGCCAUUUGUCCAAAAAUAAAAGUCACAUUGUGUACAUUUGGGAAUUUGGAUAAAAAACUUAGCUCCUACAGAUUAAGAACAUCUUUCACACAAGUUUUCUGUCUCUUUUAGGACCCUUGAUUCCUGAAGAGAACAAGGAGAGGGUACAAGAACUCCCUGAUUCUGGAGCCCUCAUGCUAGUCCCCAAUCGCCAGCUUACUGCUGAUUAUUUUGAGAAAm6ACUUGGCUUAGCCUUAAAGUUGCUCAUCAGCAAGUGUUGCCUUGGCGGGGAGAAUUCCAUCCUGACACCCUCCAGAUGGCUCUUCAAGUAGUGAACAYCCAGACCAUCGCAAUGAGUAGGGCUGGGUCUCGGCCAUGGAAAGCAUACCUCAGUGCUCAGGAUGAUACUGGCUGUCUGUUCUUAm6ACAGAm6ACUGCUAUUGGAGCCUGGAAm6ACUCAGAAAUGCAGAUCUCUGUGAAACAAAAUGAAGCAAGAACGGAGACGCUGAAUAGUUUUAUUUCUGUAUUAGAAACUGUGAUUGGAACAAUUGAAGAAAUAAAAUCAUAm6ACAGAGUCUU
Sequence (MODOMICS CODE ENCODING)	UUUUUCUGAUCUUGGCAAAAAUGUUUCCCCACGUACAA2000000006ACUGAUGUCCUUGUGCGGGUCAAGGG2000000006ACCUUUGCUAGCUGCCUGUUCUUCAGAGAGCCGUGAGCUCUGUUUUGUUGCUCUUUGUCAUGUACGCCAGAUCUUGCAUAGUUUACCAGGUCACU2000000009UUAGCAGCCACUACAAAAAGUUUUUUUGCUCCUACUCGGAGCCCCACUACAUCAA2000000006ACUACAGAAAGUGGAGGUGCUGUGUGAACUGGUGAACGAUGAGAAUGUGCAGCAGGUGCUAGAGGAGCUUCGAGGGUACUGCACGGAUGUGUCUGCGGACUUUGCACAGGCUGCCAUCUUUGCCAUAGGUGGCAUUGCCAGGACUUACACAGAUCAAUGUGUUCAGAUUUUA2000000006ACAGAGUUGCUGGGUCUUCGACAAGAGCACAUUACCACAGUGGUGGUGCAGACUUUCCGAG2000000006ACCUGGUUUGGUUGUGUCCUCAGUGUACUGAAGCUGUAUGUCAGGCCCUGCCCGGCUGUGAAGAGAACAUUCAAGAUAGUGAGGGGAAGCAAGCACUUAUUUGGCUACUUGGUGUCCAUGGGGAAAGAAUUCCUAAUGCUCCUUAUGUGUUAGAGGACUUUGUUGAGAAUGUGAAGUCGGAAACAUUUCCAGCUGUUAAGAUGGAGCUGCUCACUGCUUUGCUGCGCCUUUUCCUCUCCCGACCUGCUGAGUGCCAGGACAUGCUAGGACGUUUGUUGUAUUACUGCAUAGGUGGGUUUUUCAGAAGGAAAUAGUAUUUGCCAUGACCCAUAGUAAAAAUUCUUAAUAGCUUUCAUUGUUUGGUGAGUCACGUCUGGGACCCGAGAAGAAAAUGUGAAUGCUUCCUAGGUUUUCCUCUCUCCUUCAUUUUUUUCUCCUAUUAUGGUUGGCACAAGAGUAGGAGGAAAGUGGUUUUGUUUUUAAUGAAGUCAAUCUGUUGUCUUACCUCAGAGGAAGAAAAAGAUAUGGCUGUACGGGACCGAGGUCUCUUCUAUUAUCGCCUCCUCUUAGUUGGCAUUGAUGAAGUUAAGCGGAUUCUGUGUAGCCCUAAAUCUGACCCUACUCUUGGACUUUUGGAGGAUCCGGCAGAAAGACCUGUGAAUAGCUGGGCCUCAGACUUCAACACACUGGUGCCAGUGUAUGGCAAAGCCCACUGGGCAACUAUCUCUAAAUGCCAGGGGGCAGAGCGUUGUGACCCAGAGCUUCCUAAAACUUCA2000000009UCCUUUGCCGCAUCAGGUAAAAACAGUCCUUACCUUAAAUCUUGUCAUGAUAAAUCUUUACCUUUUCAAUGAUUGGUGGAAAGUAGAGUAUCUUAGCACUAAACCUCAGACUGUUGCCUGAAUUUGAAGCAUUUGUGAGCAAGAAAGAGGUUCGUCACUGGUUAUUUCAGCCAUUUGUCCAAAAAUAAAAGUCACAUUGUGUACAUUUGGGAAUUUGGAUAAAAAACUUAGCUCCUACAGAUUAAGAACAUCUUUCACACAAGUUUUCUGUCUCUUUUAGGACCCUUGAUUCCUGAAGAGAACAAGGAGAGGGUACAAGAACUCCCUGAUUCUGGAGCCCUCAUGCUAGUCCCCAAUCGCCAGCUUACUGCUGAUUAUUUUGAGAAA2000000006ACUUGGCUUAGCCUUAAAGUUGCUCAUCAGCAAGUGUUGCCUUGGCGGGGAGAAUUCCAUCCUGACACCCUCCAGAUGGCUCUUCAAGUAGUGAACA2000000009UCCAGACCAUCGCAAUGAGUAGGGCUGGGUCUCGGCCAUGGAAAGCAUACCUCAGUGCUCAGGAUGAUACUGGCUGUCUGUUCUUA2000000006ACAGA2000000006ACUGCUAUUGGAGCCUGGAA2000000006ACUCAGAAAUGCAGAUCUCUGUGAAACAAAAUGAAGCAAGAACGGAGACGCUGAAUAGUUUUAUUUCUGUAUUAGAAACUGUGAUUGGAACAAUUGAAGAAAUAAAAUCAUA2000000006ACAGAGUCUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	39	65	160	215	387	448	1224	1611	1708	1794	1799	1819	1931
Modification Positions	m6A	m6A	Y	m6A	m6A	m6A	Y	m6A	Y	m6A	m6A	m6A	m6A
Genomic Coordinates	1:113900207:-	1:113900181:-	1:113900086:-	1:113900031:-	1:113898757:-	1:113897922:-	1:113895772:-	1:113895385:-	1:113895288:-	1:113895202:-	1:113895197:-	1:113895177:-	1:113895065:-
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq dknfVe6BK8aP Yfn77uLS5tv8	3TeAZFYFxgvp 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn WiQcrNTGZHPT BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ Yfn77uLS5tv8	3TeAZFYFxgvp 6AyXsheySjfx msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn UN3tNpbCPHYf VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn Lny8GcCeVGc9 BtsJQJ3DteUq dknfVe6BK8aP	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	3TeAZFYFxgvp 4HMi5ykupT9V 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 JkWoGWVwjNda Yfn77uLS5tv8	msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 BtsJQJ3DteUq bXBqJigD9oV3 dknfVe6BK8aP Mk6ShCGm6RBJ iezFbUdmY3A6 S9vNeQQYrhac JkWoGWVwjNda Yfn77uLS5tv8	BtsJQJ3DteUq dknfVe6BK8aP Mk6ShCGm6RBJ JkWoGWVwjNda Yfn77uLS5tv8