General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000651800
Gene ID:	ENSG00000172936
Gene Name:	MYD88
Sequence (UNICHARACTER ENCODING)	AAUGCGACCCGACCGCGCUGAGGCUCCAGGACCGCCCGCCAUGGCUGCAGGAGGUCCCGGCGCGGGGUCUGCGGCCCCGGUCUCCUCCACAUCCUCCCUUCCCCUGGCUGCUCUCAACAUGCGAGUGCGGCGCCGCCUGUCUCUGUUCUUGAACGUGCGGACACAGGUGGCGGCCGACUGGACCGCGCUGGCGGAGGAGAUGGACUUUGAGUACUUGGAGAUCCGGCAACUGGAGACACAAGCGGACCCCACUGGCAGGCUGCUGGACGCCUGGCAGGGACGCCCUGGCGCCUCUGUAGGCCGACUGCUCGAGCUGCUUACCAAGCUGGGCCGCGACGACGUGCUGCUGGAGCUGGGACCCAGCAUUGAGGAGGAUUGCCAAAAGUAUAUCUUGAAGCAGCAGCAGGAGGAGGCUGAGAAGCCUUUACAGGUGGCCGCUGUAGACAGCAGUGUCCCACGGACAGCAGAGCUGGCGGGCAUCACCACACUUGAUGACCCCCUGGGUGCCGCCGGAUGGUGGUGGUUGUCUCUGAUGAUUACCUGCAGAGCAAGGAAUGUGACUUCCAGACCAAAUUUGCACUCAGCCUCUCUCCAGGUGCCCAUCAGAAGCGACUGAUCCCCAUCAAGUACAAGGCAAUGAAGAAAGAGUUCCCCAGCAUCCUGAGGUUCAUCACUGUCUGCGACUACACCAACCCCUGCACCAAAUCUUGGUUCUGGЖCUCGCCUUGCCAAGGCCUUGUCCCUGCCCUGAAGЖCUGUUCUGAGGCCCUGGGUGUGUGUGUAUCUGUCUGCCUGUCCAUGUACUUCUGCCCUGCCUCCUCCUUUCGUUGUAGGAGGAAUCUGUGCUCUACUUACCUCUCAAUUCCUGGAGAUGCCAACUUCACAGACACGUCUGCAGCAGCUGGACAUCACAUUUCAUGUCCUGCAUGGAACCAGUGGCUGUGAGUGGCAUGUCCACUUGCUGGAUUAUCAGCCAGGЖCACUAUAGAACAGGACCAGCUGAGACUAAGAAGGACCAGCAGAGCCAGCUCAGCUCUGAGCCAUUCACACAUCUUCACCCUCAGUUUCCUCACUUGAGGAGUGGGAUGGGGAGAACAGAGAGUAGCUGUGUUUGAAUCCCUGUAGGAAAUGGUGAAGCAUAGCUCUGGGUCUCCUGGGGGAGACCAGGCUUGGCUGCGGGAGAGCUGGCUGUUGCUGGЖCUACAUGCUGGCCACUGCUGUGACCACGACACUGCUGGGGCAGCUUCUUCCACAGUGAUGCCUACUGAUGCUUCAGUGCCUCUGCACACCGCCCAUUCCACUUCCUCCUUCCCCACAGGGCAGGUGGGGAAGCAGUUUGGCCCAGCCCAAGGAGACCCCACCUUGAGCCUUAUUUCCUAAUGGGUCCACCUCUCAUCUGCAUCUUUCACACCUCCCAGCUUCUGCCCAACCUUCAGCAGUGACAAGUCCCCAAGAGЖCUCGCCUGAGCAGCUUGGGCUGCUUUUCAUUUCCACCUGUCAGGAUGCCUGUGGUCAUGCUCUCAGCUCCACCUGGCAUGAGAAGGGAUCCUGGCCUCUGGCAUAUUCAUCAAGUAUGAGUUCUGGGGAUGAGUCACUGUAAUGAUGUGAGCAGGGAGCCUUCCUCCCUGGGCCACCUGCAGAGAGCUUUCCCACCAACUUUGUACCUUGAUUGCCUUACAAAGUUAUUUGUUUACAAACAGCGACCAUAUAAAAGCCUCCUGCCCCAAAGCUUGUGGGCACAUGGGCACAUACAGACUCACAUACAGACACACACAUAUAUGUACAGACAUGUACUCUCACACACACAGGCACCAGCAUACACACGUUUUUCUAGGUACAGCUCCCAGGAACAGCUAGGUGGGAAAGUCCCAUCACUGAGGGAGCCUAACCAUGUCCCUGAACAAAAAUUGGGCACUCAUCUAUUCCUUUUCUCUUGUGUCCCUACUCAUUGAAACCAAACUCUGGAAAGGACCCAAUGUACCAGUAUUUAUACCUCUAAUGAAGCACAGAGAGAGGAAGAGAGCUGCUUAAACUCACACAACAAUGAЖCUGCAGACACAGCUGUUCUCUCCCUCUCUCCUUCCCAGAGCAAUUUAUACUPUACCCUCAGGCUGUCCUCUGGGGAGAAGGUGCCAUGGUCUUAGGUGUCUGUGCCCCAGGACAGACCCUAGGACCCUAAAUCCAAUAGAAAAUGCAUAUCUUUGCUCCACUUUCAGCCAGGCUGGAGCAAGGUACCUUUUCUUAGGAUCUUGGGAGGGAAUGGAUGCCCCUCUCUGCAUGAUCUUGUUGAGGCAUUUAGCUGCCAUGCACCUGUCCCCCUPUAAUACUGGGCAUUUUAAAGCCAUCUCAAGAGGCAUCUUCUACAUGUUUUGUACGCAUUAAAAUAAUUUCAAAGAUAUCUGAGAAAAGCCGAUAUUUGCCAUUCUUCCUAUAUCCUGGAAUAUAUCUUGCAUCCUGAGUUUAUAAUAAUAAAUAAUAUUCUACCUUGG
Sequence (SHORT NAMES ENCODING)	AAUGCGACCCGACCGCGCUGAGGCUCCAGGACCGCCCGCCAUGGCUGCAGGAGGUCCCGGCGCGGGGUCUGCGGCCCCGGUCUCCUCCACAUCCUCCCUUCCCCUGGCUGCUCUCAACAUGCGAGUGCGGCGCCGCCUGUCUCUGUUCUUGAACGUGCGGACACAGGUGGCGGCCGACUGGACCGCGCUGGCGGAGGAGAUGGACUUUGAGUACUUGGAGAUCCGGCAACUGGAGACACAAGCGGACCCCACUGGCAGGCUGCUGGACGCCUGGCAGGGACGCCCUGGCGCCUCUGUAGGCCGACUGCUCGAGCUGCUUACCAAGCUGGGCCGCGACGACGUGCUGCUGGAGCUGGGACCCAGCAUUGAGGAGGAUUGCCAAAAGUAUAUCUUGAAGCAGCAGCAGGAGGAGGCUGAGAAGCCUUUACAGGUGGCCGCUGUAGACAGCAGUGUCCCACGGACAGCAGAGCUGGCGGGCAUCACCACACUUGAUGACCCCCUGGGUGCCGCCGGAUGGUGGUGGUUGUCUCUGAUGAUUACCUGCAGAGCAAGGAAUGUGACUUCCAGACCAAAUUUGCACUCAGCCUCUCUCCAGGUGCCCAUCAGAAGCGACUGAUCCCCAUCAAGUACAAGGCAAUGAAGAAAGAGUUCCCCAGCAUCCUGAGGUUCAUCACUGUCUGCGACUACACCAACCCCUGCACCAAAUCUUGGUUCUGGm6ACUCGCCUUGCCAAGGCCUUGUCCCUGCCCUGAAGm6ACUGUUCUGAGGCCCUGGGUGUGUGUGUAUCUGUCUGCCUGUCCAUGUACUUCUGCCCUGCCUCCUCCUUUCGUUGUAGGAGGAAUCUGUGCUCUACUUACCUCUCAAUUCCUGGAGAUGCCAACUUCACAGACACGUCUGCAGCAGCUGGACAUCACAUUUCAUGUCCUGCAUGGAACCAGUGGCUGUGAGUGGCAUGUCCACUUGCUGGAUUAUCAGCCAGGm6ACACUAUAGAACAGGACCAGCUGAGACUAAGAAGGACCAGCAGAGCCAGCUCAGCUCUGAGCCAUUCACACAUCUUCACCCUCAGUUUCCUCACUUGAGGAGUGGGAUGGGGAGAACAGAGAGUAGCUGUGUUUGAAUCCCUGUAGGAAAUGGUGAAGCAUAGCUCUGGGUCUCCUGGGGGAGACCAGGCUUGGCUGCGGGAGAGCUGGCUGUUGCUGGm6ACUACAUGCUGGCCACUGCUGUGACCACGACACUGCUGGGGCAGCUUCUUCCACAGUGAUGCCUACUGAUGCUUCAGUGCCUCUGCACACCGCCCAUUCCACUUCCUCCUUCCCCACAGGGCAGGUGGGGAAGCAGUUUGGCCCAGCCCAAGGAGACCCCACCUUGAGCCUUAUUUCCUAAUGGGUCCACCUCUCAUCUGCAUCUUUCACACCUCCCAGCUUCUGCCCAACCUUCAGCAGUGACAAGUCCCCAAGAGm6ACUCGCCUGAGCAGCUUGGGCUGCUUUUCAUUUCCACCUGUCAGGAUGCCUGUGGUCAUGCUCUCAGCUCCACCUGGCAUGAGAAGGGAUCCUGGCCUCUGGCAUAUUCAUCAAGUAUGAGUUCUGGGGAUGAGUCACUGUAAUGAUGUGAGCAGGGAGCCUUCCUCCCUGGGCCACCUGCAGAGAGCUUUCCCACCAACUUUGUACCUUGAUUGCCUUACAAAGUUAUUUGUUUACAAACAGCGACCAUAUAAAAGCCUCCUGCCCCAAAGCUUGUGGGCACAUGGGCACAUACAGACUCACAUACAGACACACACAUAUAUGUACAGACAUGUACUCUCACACACACAGGCACCAGCAUACACACGUUUUUCUAGGUACAGCUCCCAGGAACAGCUAGGUGGGAAAGUCCCAUCACUGAGGGAGCCUAACCAUGUCCCUGAACAAAAAUUGGGCACUCAUCUAUUCCUUUUCUCUUGUGUCCCUACUCAUUGAAACCAAACUCUGGAAAGGACCCAAUGUACCAGUAUUUAUACCUCUAAUGAAGCACAGAGAGAGGAAGAGAGCUGCUUAAACUCACACAACAAUGAm6ACUGCAGACACAGCUGUUCUCUCCCUCUCUCCUUCCCAGAGCAAUUUAUACUYUACCCUCAGGCUGUCCUCUGGGGAGAAGGUGCCAUGGUCUUAGGUGUCUGUGCCCCAGGACAGACCCUAGGACCCUAAAUCCAAUAGAAAAUGCAUAUCUUUGCUCCACUUUCAGCCAGGCUGGAGCAAGGUACCUUUUCUUAGGAUCUUGGGAGGGAAUGGAUGCCCCUCUCUGCAUGAUCUUGUUGAGGCAUUUAGCUGCCAUGCACCUGUCCCCCUYUAAUACUGGGCAUUUUAAAGCCAUCUCAAGAGGCAUCUUCUACAUGUUUUGUACGCAUUAAAAUAAUUUCAAAGAUAUCUGAGAAAAGCCGAUAUUUGCCAUUCUUCCUAUAUCCUGGAAUAUAUCUUGCAUCCUGAGUUUAUAAUAAUAAAUAAUAUUCUACCUUGG
Sequence (MODOMICS CODE ENCODING)	AAUGCGACCCGACCGCGCUGAGGCUCCAGGACCGCCCGCCAUGGCUGCAGGAGGUCCCGGCGCGGGGUCUGCGGCCCCGGUCUCCUCCACAUCCUCCCUUCCCCUGGCUGCUCUCAACAUGCGAGUGCGGCGCCGCCUGUCUCUGUUCUUGAACGUGCGGACACAGGUGGCGGCCGACUGGACCGCGCUGGCGGAGGAGAUGGACUUUGAGUACUUGGAGAUCCGGCAACUGGAGACACAAGCGGACCCCACUGGCAGGCUGCUGGACGCCUGGCAGGGACGCCCUGGCGCCUCUGUAGGCCGACUGCUCGAGCUGCUUACCAAGCUGGGCCGCGACGACGUGCUGCUGGAGCUGGGACCCAGCAUUGAGGAGGAUUGCCAAAAGUAUAUCUUGAAGCAGCAGCAGGAGGAGGCUGAGAAGCCUUUACAGGUGGCCGCUGUAGACAGCAGUGUCCCACGGACAGCAGAGCUGGCGGGCAUCACCACACUUGAUGACCCCCUGGGUGCCGCCGGAUGGUGGUGGUUGUCUCUGAUGAUUACCUGCAGAGCAAGGAAUGUGACUUCCAGACCAAAUUUGCACUCAGCCUCUCUCCAGGUGCCCAUCAGAAGCGACUGAUCCCCAUCAAGUACAAGGCAAUGAAGAAAGAGUUCCCCAGCAUCCUGAGGUUCAUCACUGUCUGCGACUACACCAACCCCUGCACCAAAUCUUGGUUCUGG2000000006ACUCGCCUUGCCAAGGCCUUGUCCCUGCCCUGAAG2000000006ACUGUUCUGAGGCCCUGGGUGUGUGUGUAUCUGUCUGCCUGUCCAUGUACUUCUGCCCUGCCUCCUCCUUUCGUUGUAGGAGGAAUCUGUGCUCUACUUACCUCUCAAUUCCUGGAGAUGCCAACUUCACAGACACGUCUGCAGCAGCUGGACAUCACAUUUCAUGUCCUGCAUGGAACCAGUGGCUGUGAGUGGCAUGUCCACUUGCUGGAUUAUCAGCCAGG2000000006ACACUAUAGAACAGGACCAGCUGAGACUAAGAAGGACCAGCAGAGCCAGCUCAGCUCUGAGCCAUUCACACAUCUUCACCCUCAGUUUCCUCACUUGAGGAGUGGGAUGGGGAGAACAGAGAGUAGCUGUGUUUGAAUCCCUGUAGGAAAUGGUGAAGCAUAGCUCUGGGUCUCCUGGGGGAGACCAGGCUUGGCUGCGGGAGAGCUGGCUGUUGCUGG2000000006ACUACAUGCUGGCCACUGCUGUGACCACGACACUGCUGGGGCAGCUUCUUCCACAGUGAUGCCUACUGAUGCUUCAGUGCCUCUGCACACCGCCCAUUCCACUUCCUCCUUCCCCACAGGGCAGGUGGGGAAGCAGUUUGGCCCAGCCCAAGGAGACCCCACCUUGAGCCUUAUUUCCUAAUGGGUCCACCUCUCAUCUGCAUCUUUCACACCUCCCAGCUUCUGCCCAACCUUCAGCAGUGACAAGUCCCCAAGAG2000000006ACUCGCCUGAGCAGCUUGGGCUGCUUUUCAUUUCCACCUGUCAGGAUGCCUGUGGUCAUGCUCUCAGCUCCACCUGGCAUGAGAAGGGAUCCUGGCCUCUGGCAUAUUCAUCAAGUAUGAGUUCUGGGGAUGAGUCACUGUAAUGAUGUGAGCAGGGAGCCUUCCUCCCUGGGCCACCUGCAGAGAGCUUUCCCACCAACUUUGUACCUUGAUUGCCUUACAAAGUUAUUUGUUUACAAACAGCGACCAUAUAAAAGCCUCCUGCCCCAAAGCUUGUGGGCACAUGGGCACAUACAGACUCACAUACAGACACACACAUAUAUGUACAGACAUGUACUCUCACACACACAGGCACCAGCAUACACACGUUUUUCUAGGUACAGCUCCCAGGAACAGCUAGGUGGGAAAGUCCCAUCACUGAGGGAGCCUAACCAUGUCCCUGAACAAAAAUUGGGCACUCAUCUAUUCCUUUUCUCUUGUGUCCCUACUCAUUGAAACCAAACUCUGGAAAGGACCCAAUGUACCAGUAUUUAUACCUCUAAUGAAGCACAGAGAGAGGAAGAGAGCUGCUUAAACUCACACAACAAUGA2000000006ACUGCAGACACAGCUGUUCUCUCCCUCUCUCCUUCCCAGAGCAAUUUAUACU2000000009UUACCCUCAGGCUGUCCUCUGGGGAGAAGGUGCCAUGGUCUUAGGUGUCUGUGCCCCAGGACAGACCCUAGGACCCUAAAUCCAAUAGAAAAUGCAUAUCUUUGCUCCACUUUCAGCCAGGCUGGAGCAAGGUACCUUUUCUUAGGAUCUUGGGAGGGAAUGGAUGCCCCUCUCUGCAUGAUCUUGUUGAGGCAUUUAGCUGCCAUGCACCUGUCCCCCU2000000009UUAAUACUGGGCAUUUUAAAGCCAUCUCAAGAGGCAUCUUCUACAUGUUUUGUACGCAUUAAAAUAAUUUCAAAGAUAUCUGAGAAAAGCCGAUAUUUGCCAUUCUUCCUAUAUCCUGGAAUAUAUCUUGCAUCCUGAGUUUAUAAUAAUAAAUAAUAUUCUACCUUGG

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	718	753	977	1196	1453	2043	2095	2315
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	Y	Y
Genomic Coordinates	3:38141254:+	3:38141289:+	3:38141513:+	3:38141732:+	3:38141989:+	3:38142579:+	3:38142631:+	3:38142851:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	5Nnepx5V7yHo aHkqKEJkRYyb gBgcfFQ5WN9C Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC WiQcrNTGZHPT BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML Yfn77uLS5tv8	KTLz8piFYdwC WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC nfCHyrYzE6fB WiQcrNTGZHPT Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	5Nnepx5V7yHo aHkqKEJkRYyb Mg9GixDBFQAT msuJfBpJvM5H VyCX26p5UBRL 8cMbzB4aD5Se ArijeGVTwYBw KTLz8piFYdwC KjeH7Nsffuas Lny8GcCeVGc9 UKen6WEino9G Yfn77uLS5tv8	VyCX26p5UBRL Lny8GcCeVGc9 UKen6WEino9G BtsJQJ3DteUq Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8	BtsJQJ3DteUq bXBqJigD9oV3 Yfn77uLS5tv8