General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000493348
Gene ID:	ENSG00000169908
Gene Name:	TM4SF1
Sequence (UNICHARACTER ENCODING)	ACUAAGAAUCGCAGUAUUUAAGAGGUAGCAGGAAUGGGCUGAGAGUGGUGUUUGCUUUCUCCACCAGAAGGGCACACUUUCAUCUAAUUUGGGGUAUCACUGAGCUGAAGACAAAGAGAAGGGGGAGAAAACCUAGCAGACCACCAUGUGCUAUGGGAAGUGUGCACGAUGCAUCGGACAUUCUCUGGUGGGGCUCGCCCPCCUGUGCAUCGCGGCUAAUAUUUUGCUPUACUUUCCCAAUGGGGAAACAAAGUAUGCCUCCGAAAЖCCACCUCAGCCGCUUCGUGUGGUUCUUUUCUGGCAUCGUAGGAGGUGGCCUGCUGAUGCUCCUGCCAGCAUUUGUCUUCAUUGGGCUGGAACAGGAUGACUGCUGUGGCUGCUGUGGCCAUGAAAACUGUGGCAAACGAUGUGCGGUACCUUCUGGAUACCUCCACAUGGUCCGAGUGCACUGAACCCAAGCACAUUGUGGAAUGGAAUGUAUCUCUGUUUUCUAUCCUCUUGGCUCUUGGUGGAAUUGAAUUCAUCUUGUGUCUUAUUCAAGUAAUAAAUGGAGUGCUUGGAGGCAUAUGUGGCUUUUGCUGCUCUCACCAACAGCAAUAUGACUGCUAAAAGAACCAACCCAGGACAGAGCCACAAUCUUCCUCUAUUUCAUUGUAAUUUAUAUAUUUCACUUGUAUUCAUUUGUAAAACUUUGUAUUAGUGUAACAUACUCCCCACAGUCUACUUUUACAAACGCCUGUAAAGACUGGCAUCUUCACAGGAUGUCAGUGUUUAAAUUUAGUAAACUUCUUUUUUGUUUGUUUAUUUGUUUUUGUUUUUUUUUAAGGAAUGAGGAAACAAЖCCACCCUCUGGGGGUAAUUUACAGACUGAGUGACAGUACUCAGUAUAUCUGAGAUAAACUCUAUAAUGUUUUGGAUAAAAAUAACAUUCCAAUCACUAUUGUAUAUAUGUGCAUGUAUUUUUUAAAUUAAAGAUGU
Sequence (SHORT NAMES ENCODING)	ACUAAGAAUCGCAGUAUUUAAGAGGUAGCAGGAAUGGGCUGAGAGUGGUGUUUGCUUUCUCCACCAGAAGGGCACACUUUCAUCUAAUUUGGGGUAUCACUGAGCUGAAGACAAAGAGAAGGGGGAGAAAACCUAGCAGACCACCAUGUGCUAUGGGAAGUGUGCACGAUGCAUCGGACAUUCUCUGGUGGGGCUCGCCCYCCUGUGCAUCGCGGCUAAUAUUUUGCUYUACUUUCCCAAUGGGGAAACAAAGUAUGCCUCCGAAAm6ACCACCUCAGCCGCUUCGUGUGGUUCUUUUCUGGCAUCGUAGGAGGUGGCCUGCUGAUGCUCCUGCCAGCAUUUGUCUUCAUUGGGCUGGAACAGGAUGACUGCUGUGGCUGCUGUGGCCAUGAAAACUGUGGCAAACGAUGUGCGGUACCUUCUGGAUACCUCCACAUGGUCCGAGUGCACUGAACCCAAGCACAUUGUGGAAUGGAAUGUAUCUCUGUUUUCUAUCCUCUUGGCUCUUGGUGGAAUUGAAUUCAUCUUGUGUCUUAUUCAAGUAAUAAAUGGAGUGCUUGGAGGCAUAUGUGGCUUUUGCUGCUCUCACCAACAGCAAUAUGACUGCUAAAAGAACCAACCCAGGACAGAGCCACAAUCUUCCUCUAUUUCAUUGUAAUUUAUAUAUUUCACUUGUAUUCAUUUGUAAAACUUUGUAUUAGUGUAACAUACUCCCCACAGUCUACUUUUACAAACGCCUGUAAAGACUGGCAUCUUCACAGGAUGUCAGUGUUUAAAUUUAGUAAACUUCUUUUUUGUUUGUUUAUUUGUUUUUGUUUUUUUUUAAGGAAUGAGGAAACAAm6ACCACCCUCUGGGGGUAAUUUACAGACUGAGUGACAGUACUCAGUAUAUCUGAGAUAAACUCUAUAAUGUUUUGGAUAAAAAUAACAUUCCAAUCACUAUUGUAUAUAUGUGCAUGUAUUUUUUAAAUUAAAGAUGU
Sequence (MODOMICS CODE ENCODING)	ACUAAGAAUCGCAGUAUUUAAGAGGUAGCAGGAAUGGGCUGAGAGUGGUGUUUGCUUUCUCCACCAGAAGGGCACACUUUCAUCUAAUUUGGGGUAUCACUGAGCUGAAGACAAAGAGAAGGGGGAGAAAACCUAGCAGACCACCAUGUGCUAUGGGAAGUGUGCACGAUGCAUCGGACAUUCUCUGGUGGGGCUCGCCC2000000009UCCUGUGCAUCGCGGCUAAUAUUUUGCU2000000009UUACUUUCCCAAUGGGGAAACAAAGUAUGCCUCCGAAA2000000006ACCACCUCAGCCGCUUCGUGUGGUUCUUUUCUGGCAUCGUAGGAGGUGGCCUGCUGAUGCUCCUGCCAGCAUUUGUCUUCAUUGGGCUGGAACAGGAUGACUGCUGUGGCUGCUGUGGCCAUGAAAACUGUGGCAAACGAUGUGCGGUACCUUCUGGAUACCUCCACAUGGUCCGAGUGCACUGAACCCAAGCACAUUGUGGAAUGGAAUGUAUCUCUGUUUUCUAUCCUCUUGGCUCUUGGUGGAAUUGAAUUCAUCUUGUGUCUUAUUCAAGUAAUAAAUGGAGUGCUUGGAGGCAUAUGUGGCUUUUGCUGCUCUCACCAACAGCAAUAUGACUGCUAAAAGAACCAACCCAGGACAGAGCCACAAUCUUCCUCUAUUUCAUUGUAAUUUAUAUAUUUCACUUGUAUUCAUUUGUAAAACUUUGUAUUAGUGUAACAUACUCCCCACAGUCUACUUUUACAAACGCCUGUAAAGACUGGCAUCUUCACAGGAUGUCAGUGUUUAAAUUUAGUAAACUUCUUUUUUGUUUGUUUAUUUGUUUUUGUUUUUUUUUAAGGAAUGAGGAAACAA2000000006ACCACCCUCUGGGGGUAAUUUACAGACUGAGUGACAGUACUCAGUAUAUCUGAGAUAAACUCUAUAAUGUUUUGGAUAAAAAUAACAUUCCAAUCACUAUUGUAUAUAUGUGCAUGUAUUUUUUAAAUUAAAGAUGU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	201	229	267	840
Modification Positions	Y	Y	m6A	m6A
Genomic Coordinates	3:149377492:-	3:149377464:-	3:149377426:-	3:149369634:-
Level of Experimental Evidence	3	3	3	3
Level of Experimental Reliability	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ	bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ	bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ	bXBqJigD9oV3 CxQaH6qDB9bC dknfVe6BK8aP f6YSioLdAWpr Mk6ShCGm6RBJ