General Data

RNA Type	mRNA
Original Source	Sci-ModoM
Transcript ID:	ENST00000704543
Gene ID:	ENSG00000144815
Gene Name:	NXPE3
Sequence (UNICHARACTER ENCODING)	ACUUGCGGCAACGCCACAGCUCGGUACAGUUCGGACCUCCACGCCGCAGCGAAAGACUUCUGUCCUCCAGGCACCUUCACUAACCCGGUGCGGAGCACUUGGCGACGCCUCCCUGCCCAUCUCAUAUCUCUCGGCUCAUCGCUGCUCUGGGCACCAGCUGCCUCUUGGCUGGCGCUGCUGUCACACGGUGGЖCUGUUCUGGCCUUACUGAGCUGCCGUUUGGGGACAUCAGAUUCAGGUCGUAUGGGGAGAAACGAGUGUAACUUUACAAGCAAGAAGAAUUGUAUAGAAAUGUAAAAAACAUUUAUGUGUGCUUCACAUGUGGCAUGAAAAAAAUGAGGACCUCUGGUCAAAAUUGCCUGAGUUCAGAAUUUCAUGCUGGAAGGAAAGUUAGACGUAACUUCUAAUUUCUAGUUCCAGUAAGCAUCUCUUCUUGGAAAAUUUCCAAAAAAGAGUCCUGCUCUGUUGCCCAGGCUGGAGUACAUUGGUGUGAUGAUCAUGGUUCACUGCAGCCUCGACCUCCCAGGCUCAAGCAAUUCUCCUACCUCAGCCUCCUGAGUAACUGGGACUAUAGGAUUUCUUUGAAGAAAAAUGUGCUUCUUGAAUCAACUGCAGUCUCUCCUCUGCAUAAGAGCUCUUAAGGGUACUAGCAGGAUAGAAGCAAAUGAAACUGAAAGCUCAUCUGCAGCUCAGAAAAGCAAAGACAUGGAAUUUUAAAGAGUGAAGGUAGCAUGGUGUCGGCCAUGGGUGAACAAGACACAGCCAGACAAUGUGGACCAAUUUCUUCAAACUACGGCUUUUCUGCUGUCUGCUUGCAGUGUUGAUGGUGGUGGUGCUGGUCAUCAAUGUUACUCAGGUAGAGUACUUGGACCAUGAGACUGUUUCAGCCACUUUCAUCGACAGCAGUGGЖCAGUUUGUUUCCUCCCAGGUGACAGGAAUUAGCCGAAAUCCCUACUGUGGCUAUGAUCAGCAGACCCUGUCCAGCCAGGAGCGCAUGGAGGAGGЖCUCCUUGCUGGCUGCCUUGCACCGGCAGGUUCCUGAUGUGGGCCCAGUCCCCUUUGUGAAGAGCACUGACCCUUCUUCCAGCUACUUUGUCAUCUUGAЖCUCUGCUGCCUUCUUUAAGGUGGGAAGCCAGCUUGAGGUGCUGGUUCAUGUGCAGGЖUUUUCAAAGAAAGCCCAAGAAGUAUGGUGGAGЖCUACCUGCAGGCCAGAAUUCACUCCCUCAAGCUGCAGGCUGGGGCUGUGGGCAGGGUGGUGGAUUACCAGAAUGGGUUUUACAAGGUUUUCUUUACUUUGCUAUGGCCAGGCAAAGUUAAAGUAUCCGUAUCUCUGGUCCACCCCAGUGAAGGGAUCAGAGUUCUUCAGCGCUUACAGGAAGAUAAACCAGACAGGGUCUAUUUCAAGAGUCUCUUCCGUUCAGGAAGAAUUUCUGAAЖCUACUGAGUGCAACGUGUGUCUUCCUGGGAAUCUGCCCCUGUGUAЖCUPUACAGЖCCUCUACACUGGGGAGCCCUGGUUCUGCUUCAAACCAAAGAAGCUCCCUUGCAGCAGCAGAAUUACCCAUUUCAAAGGUGGAUACCUGAAAGGUCUCCUAACCGCUGCAGAGAGUGCUUUCUUCCAGAGGGUCUCACUUUGUCAUCCAGGCUGGAGUGCAGUGGCAUGAUUGCAGCUUGCUGCAGCCUCAACGUCCCGGGUUCGACGGAUUCUCCCACCUCAGCCUCCCGAGUAGUUCGGACUACAGUGGUGUCAAUAUCAAAAUGCCAGUCAACUCCAGUGGACCUGAUUGGGUAACUGUGAUUCCCAGGAGAAUAAAAGGUAAAAAAAAGAAUAAGCUUGAUGAUUUGUUGUUUUUCUUACUAACUGGGUUGAGGCUCUGUCGUU
Sequence (SHORT NAMES ENCODING)	ACUUGCGGCAACGCCACAGCUCGGUACAGUUCGGACCUCCACGCCGCAGCGAAAGACUUCUGUCCUCCAGGCACCUUCACUAACCCGGUGCGGAGCACUUGGCGACGCCUCCCUGCCCAUCUCAUAUCUCUCGGCUCAUCGCUGCUCUGGGCACCAGCUGCCUCUUGGCUGGCGCUGCUGUCACACGGUGGm6ACUGUUCUGGCCUUACUGAGCUGCCGUUUGGGGACAUCAGAUUCAGGUCGUAUGGGGAGAAACGAGUGUAACUUUACAAGCAAGAAGAAUUGUAUAGAAAUGUAAAAAACAUUUAUGUGUGCUUCACAUGUGGCAUGAAAAAAAUGAGGACCUCUGGUCAAAAUUGCCUGAGUUCAGAAUUUCAUGCUGGAAGGAAAGUUAGACGUAACUUCUAAUUUCUAGUUCCAGUAAGCAUCUCUUCUUGGAAAAUUUCCAAAAAAGAGUCCUGCUCUGUUGCCCAGGCUGGAGUACAUUGGUGUGAUGAUCAUGGUUCACUGCAGCCUCGACCUCCCAGGCUCAAGCAAUUCUCCUACCUCAGCCUCCUGAGUAACUGGGACUAUAGGAUUUCUUUGAAGAAAAAUGUGCUUCUUGAAUCAACUGCAGUCUCUCCUCUGCAUAAGAGCUCUUAAGGGUACUAGCAGGAUAGAAGCAAAUGAAACUGAAAGCUCAUCUGCAGCUCAGAAAAGCAAAGACAUGGAAUUUUAAAGAGUGAAGGUAGCAUGGUGUCGGCCAUGGGUGAACAAGACACAGCCAGACAAUGUGGACCAAUUUCUUCAAACUACGGCUUUUCUGCUGUCUGCUUGCAGUGUUGAUGGUGGUGGUGCUGGUCAUCAAUGUUACUCAGGUAGAGUACUUGGACCAUGAGACUGUUUCAGCCACUUUCAUCGACAGCAGUGGm6ACAGUUUGUUUCCUCCCAGGUGACAGGAAUUAGCCGAAAUCCCUACUGUGGCUAUGAUCAGCAGACCCUGUCCAGCCAGGAGCGCAUGGAGGAGGm6ACUCCUUGCUGGCUGCCUUGCACCGGCAGGUUCCUGAUGUGGGCCCAGUCCCCUUUGUGAAGAGCACUGACCCUUCUUCCAGCUACUUUGUCAUCUUGAm6ACUCUGCUGCCUUCUUUAAGGUGGGAAGCCAGCUUGAGGUGCUGGUUCAUGUGCAGGm6AUUUUCAAAGAAAGCCCAAGAAGUAUGGUGGAGm6ACUACCUGCAGGCCAGAAUUCACUCCCUCAAGCUGCAGGCUGGGGCUGUGGGCAGGGUGGUGGAUUACCAGAAUGGGUUUUACAAGGUUUUCUUUACUUUGCUAUGGCCAGGCAAAGUUAAAGUAUCCGUAUCUCUGGUCCACCCCAGUGAAGGGAUCAGAGUUCUUCAGCGCUUACAGGAAGAUAAACCAGACAGGGUCUAUUUCAAGAGUCUCUUCCGUUCAGGAAGAAUUUCUGAAm6ACUACUGAGUGCAACGUGUGUCUUCCUGGGAAUCUGCCCCUGUGUAm6ACUYUACAGm6ACCUCUACACUGGGGAGCCCUGGUUCUGCUUCAAACCAAAGAAGCUCCCUUGCAGCAGCAGAAUUACCCAUUUCAAAGGUGGAUACCUGAAAGGUCUCCUAACCGCUGCAGAGAGUGCUUUCUUCCAGAGGGUCUCACUUUGUCAUCCAGGCUGGAGUGCAGUGGCAUGAUUGCAGCUUGCUGCAGCCUCAACGUCCCGGGUUCGACGGAUUCUCCCACCUCAGCCUCCCGAGUAGUUCGGACUACAGUGGUGUCAAUAUCAAAAUGCCAGUCAACUCCAGUGGACCUGAUUGGGUAACUGUGAUUCCCAGGAGAAUAAAAGGUAAAAAAAAGAAUAAGCUUGAUGAUUUGUUGUUUUUCUUACUAACUGGGUUGAGGCUCUGUCGUU
Sequence (MODOMICS CODE ENCODING)	ACUUGCGGCAACGCCACAGCUCGGUACAGUUCGGACCUCCACGCCGCAGCGAAAGACUUCUGUCCUCCAGGCACCUUCACUAACCCGGUGCGGAGCACUUGGCGACGCCUCCCUGCCCAUCUCAUAUCUCUCGGCUCAUCGCUGCUCUGGGCACCAGCUGCCUCUUGGCUGGCGCUGCUGUCACACGGUGG2000000006ACUGUUCUGGCCUUACUGAGCUGCCGUUUGGGGACAUCAGAUUCAGGUCGUAUGGGGAGAAACGAGUGUAACUUUACAAGCAAGAAGAAUUGUAUAGAAAUGUAAAAAACAUUUAUGUGUGCUUCACAUGUGGCAUGAAAAAAAUGAGGACCUCUGGUCAAAAUUGCCUGAGUUCAGAAUUUCAUGCUGGAAGGAAAGUUAGACGUAACUUCUAAUUUCUAGUUCCAGUAAGCAUCUCUUCUUGGAAAAUUUCCAAAAAAGAGUCCUGCUCUGUUGCCCAGGCUGGAGUACAUUGGUGUGAUGAUCAUGGUUCACUGCAGCCUCGACCUCCCAGGCUCAAGCAAUUCUCCUACCUCAGCCUCCUGAGUAACUGGGACUAUAGGAUUUCUUUGAAGAAAAAUGUGCUUCUUGAAUCAACUGCAGUCUCUCCUCUGCAUAAGAGCUCUUAAGGGUACUAGCAGGAUAGAAGCAAAUGAAACUGAAAGCUCAUCUGCAGCUCAGAAAAGCAAAGACAUGGAAUUUUAAAGAGUGAAGGUAGCAUGGUGUCGGCCAUGGGUGAACAAGACACAGCCAGACAAUGUGGACCAAUUUCUUCAAACUACGGCUUUUCUGCUGUCUGCUUGCAGUGUUGAUGGUGGUGGUGCUGGUCAUCAAUGUUACUCAGGUAGAGUACUUGGACCAUGAGACUGUUUCAGCCACUUUCAUCGACAGCAGUGG2000000006ACAGUUUGUUUCCUCCCAGGUGACAGGAAUUAGCCGAAAUCCCUACUGUGGCUAUGAUCAGCAGACCCUGUCCAGCCAGGAGCGCAUGGAGGAGG2000000006ACUCCUUGCUGGCUGCCUUGCACCGGCAGGUUCCUGAUGUGGGCCCAGUCCCCUUUGUGAAGAGCACUGACCCUUCUUCCAGCUACUUUGUCAUCUUGA2000000006ACUCUGCUGCCUUCUUUAAGGUGGGAAGCCAGCUUGAGGUGCUGGUUCAUGUGCAGG2000000006AUUUUCAAAGAAAGCCCAAGAAGUAUGGUGGAG2000000006ACUACCUGCAGGCCAGAAUUCACUCCCUCAAGCUGCAGGCUGGGGCUGUGGGCAGGGUGGUGGAUUACCAGAAUGGGUUUUACAAGGUUUUCUUUACUUUGCUAUGGCCAGGCAAAGUUAAAGUAUCCGUAUCUCUGGUCCACCCCAGUGAAGGGAUCAGAGUUCUUCAGCGCUUACAGGAAGAUAAACCAGACAGGGUCUAUUUCAAGAGUCUCUUCCGUUCAGGAAGAAUUUCUGAA2000000006ACUACUGAGUGCAACGUGUGUCUUCCUGGGAAUCUGCCCCUGUGUA2000000006ACU2000000009UUACAG2000000006ACCUCUACACUGGGGAGCCCUGGUUCUGCUUCAAACCAAAGAAGCUCCCUUGCAGCAGCAGAAUUACCCAUUUCAAAGGUGGAUACCUGAAAGGUCUCCUAACCGCUGCAGAGAGUGCUUUCUUCCAGAGGGUCUCACUUUGUCAUCCAGGCUGGAGUGCAGUGGCAUGAUUGCAGCUUGCUGCAGCCUCAACGUCCCGGGUUCGACGGAUUCUCCCACCUCAGCCUCCCGAGUAGUUCGGACUACAGUGGUGUCAAUAUCAAAAUGCCAGUCAACUCCAGUGGACCUGAUUGGGUAACUGUGAUUCCCAGGAGAAUAAAAGGUAAAAAAAAGAAUAAGCUUGAUGAUUUGUUGUUUUUCUUACUAACUGGGUUGAGGCUCUGUCGUU

Score Table

_{Table containing the score explanation. Score identify the level of experimental reliability and evidence so as exaplained in the 2023 release manuscript. Class 1 should be considered as highlyrelevant. Class 2 evidences are considered as Solid, namely large errors are unlikely and minor errors should not undermine the meaning of data. Class 3 is considered as speculative and errors are expected. Class 4 is considered as questionable. Class 5 evidence means that verification and data are still to be collected. Class 6 data cannot be estimated.}

Method Classification	Score
Multiple direct experimental evidence	1
Direct experimental evidence	2
Inferred based on indirect experimental evidence	3
Predicted computationally	4
Evidence not yet annotated (Unknown)	5
Irrelevant	6

Modification Positions

_{Table containing the original modifications present in the MODOMICS sequences. Edit locations not originally present in the RNA sequences are marked by their source. Their scores are in third row.}

Position in the Sequence	192	909	1004	1103	1160	1193	1432	1478	1481	1487
Modification Positions	m6A	m6A	m6A	m6A	m6A	m6A	m6A	m6A	Y	m6A
Genomic Coordinates	3:101779855:+	3:101801282:+	3:101801377:+	3:101801476:+	3:101801533:+	3:101801566:+	3:101801805:+	3:101801851:+	3:101801854:+	3:101801860:+
Level of Experimental Evidence	3	3	3	3	3	3	3	3	3	3
Level of Experimental Reliability	3	3	3	3	3	3	3	3	3	3
Source	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM	Sci-ModoM
EUFIDs	aivdrAsbdKEU msuJfBpJvM5H QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M Lny8GcCeVGc9 UKen6WEino9G	3TeAZFYFxgvp 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn ArijeGVTwYBw BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3	3TeAZFYFxgvp 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3	3TeAZFYFxgvp 4HMi5ykupT9V 5aTkEfEpX8Xm 5FhTyQVy2tKW 5Nnepx5V7yHo 6AyXsheySjfx 6UuHp6YApVKv aHkqKEJkRYyb aivdrAsbdKEU Ap2q43bQLNek gBgcfFQ5WN9C gZuvgwMuBfgh jNkxUQNx8GRd KRfQJWH4K5KH msuJfBpJvM5H nGifePrmgHfe QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn D6ncpa2PPWj3 BsCW7emuRX7M KENzb7mwdBd9 KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi PF5iqBNSbHaa UKen6WEino9G XUkp6ghERQML bXBqJigD9oV3	6AyXsheySjfx gBgcfFQ5WN9C gZuvgwMuBfgh Mg9GixDBFQAT msuJfBpJvM5H nGifePrmgHfe QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 UKen6WEino9G XUkp6ghERQML	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U Lny8GcCeVGc9 bXBqJigD9oV3	4HMi5ykupT9V 5aTkEfEpX8Xm 6AyXsheySjfx aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh msuJfBpJvM5H QmcpiJ88DBDn QpiKdbVikVz2 VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G BtsJQJ3DteUq bXBqJigD9oV3	6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn aJksAshEgQ8U BsCW7emuRX7M KjeH7Nsffuas Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3	BtsJQJ3DteUq bXBqJigD9oV3	3TeAZFYFxgvp 6AyXsheySjfx 6UuHp6YApVKv aivdrAsbdKEU Ap2q43bQLNek gZuvgwMuBfgh jNkxUQNx8GRd msuJfBpJvM5H NjZ8bGGJsNSR Q36pf44ZRvxu QmcpiJ88DBDn QpiKdbVikVz2 UN3tNpbCPHYf V5PvfiKsgFMd VL7zkHvkfkoB VyCX26p5UBRL WdHxkJGRmFxn BkoLW2CBToyL KTLz8piFYdwC BsCW7emuRX7M KENzb7mwdBd9 Lny8GcCeVGc9 LZJKems7W2wi UKen6WEino9G XUkp6ghERQML BtsJQJ3DteUq bXBqJigD9oV3